Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.7e-106 388.7 191 100.0
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.3e-102 375.6 191 96.3
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 2.5e-88 328.9 189 83.1
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 3.3e-88 328.6 189 84.1
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 5.6e-88 327.8 189 83.6
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 5.2e-86 321.2 189 82.0
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.0e-74 281.2 190 72.6
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 3.6e-71 271.9 196 67.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 4.0e-70 268.5 188 70.7
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.0e-69 266.2 194 70.1
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.8e-69 264.6 190 70.0
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.7e-68 263.1 193 68.4
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 1.7e-68 263.1 195 69.7
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.2e-68 262.7 189 66.7
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.1e-67 260.4 187 64.7
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 5.4e-67 258.1 193 69.9
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 7.1e-67 257.7 187 64.2
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 7.1e-67 257.7 202 66.3
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.6e-66 256.5 194 67.0
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 2.7e-66 255.8 185 64.3
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 3.5e-66 255.4 189 65.6
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 6.0e-66 254.6 186 65.6
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 6.0e-66 254.6 185 63.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 7.9e-66 254.2 186 65.1
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 7.9e-66 254.2 186 66.1
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 7.9e-66 254.2 194 66.0
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.0e-65 253.8 194 66.0
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.3e-65 253.4 186 65.1
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.3e-65 253.4 186 66.1
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.3e-65 252.7 183 64.5
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 5.1e-65 251.5 173 68.8
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 8.7e-65 250.8 187 62.0
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.5e-64 250.0 188 66.0
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 2.5e-64 249.2 183 61.7
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 3.3e-64 248.8 169 70.4
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 4.3e-64 248.4 187 60.4
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 5.6e-64 248.1 189 64.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 7.4e-64 247.7 186 64.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 9.6e-64 247.3 183 62.8
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 9.6e-64 247.3 176 64.2
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.3e-63 246.9 186 64.5
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 2.8e-63 245.7 183 61.7
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 4.8e-63 245.0 186 61.8
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 4.8e-63 245.0 187 61.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 6.2e-63 244.6 189 61.9
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.1e-62 243.8 187 63.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.8e-62 243.0 193 60.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.4e-62 242.7 184 62.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 2.4e-62 242.7 159 69.2
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 5.3e-62 241.5 176 63.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 6.9e-62 241.1 188 63.8
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 1.2e-61 240.4 188 60.6
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 2.0e-61 239.6 188 60.1
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.6e-61 239.2 186 60.2
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 3.4e-61 238.8 180 64.4
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 3.4e-61 238.8 188 62.2
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 5.8e-61 238.0 182 59.9
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 7.6e-61 237.7 186 60.8
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.3e-60 236.9 176 63.1
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.3e-60 236.9 183 61.7
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 2.2e-60 236.1 173 64.2
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 3.8e-60 235.3 187 62.6
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.4e-59 232.6 190 58.4
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.4e-59 232.6 155 67.7
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 3.2e-59 232.3 186 59.7
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 4.2e-59 231.9 179 60.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 9.3e-59 230.7 193 59.1
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 9.3e-59 230.7 180 59.4
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 9.3e-59 230.7 188 58.0
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.3e-59 230.7 179 59.2
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.3e-59 230.7 179 59.2
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 1.2e-58 230.3 192 59.9
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.2e-58 230.3 178 61.2
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.6e-58 229.9 173 66.5
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 4.6e-58 228.4 193 58.0
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 7.9e-58 227.6 186 60.8
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.0e-57 227.3 179 58.1
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.0e-57 227.3 186 55.9
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.3e-57 226.9 182 59.3
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.3e-57 226.9 157 65.0
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.3e-57 226.9 209 55.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 3.0e-57 225.7 186 55.9
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 8.7e-57 224.2 192 56.8
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 1.5e-56 223.4 182 58.2
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.5e-56 223.4 182 58.8
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 3.3e-56 222.2 176 59.7
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 4.3e-56 221.9 182 58.2
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 5.6e-56 221.5 191 59.2
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 7.4e-56 221.1 186 57.0
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 9.6e-56 220.7 182 55.5
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.3e-55 220.3 182 58.2
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.3e-55 220.3 186 59.1
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.7e-55 218.8 179 56.4
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 3.7e-55 218.8 186 54.3
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 3.7e-55 218.8 174 58.0
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 6.2e-55 218.0 167 63.5
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 8.1e-55 217.6 186 53.8
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 8.1e-55 217.6 186 53.8
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.1e-54 217.2 179 57.0
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.4e-54 216.9 179 56.4
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.8e-54 216.5 186 54.3
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.0e-52 210.7 145 65.5
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.3e-52 210.3 152 60.5
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 2.9e-52 209.1 183 55.7
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 1.3e-47 193.7 155 65.2
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 3.1e-46 189.1 148 56.1
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.3e-44 183.7 164 50.0
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.6e-42 176.8 165 50.9
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 2.1e-42 176.4 153 52.9
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 2.7e-42 176.0 193 46.6
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 4.6e-42 175.3 119 69.7
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 5.1e-41 171.8 148 50.7
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 5.1e-41 171.8 148 50.7
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 8.7e-41 171.0 188 44.7
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 9.7e-40 167.5 157 46.5
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.4e-38 163.7 140 50.7
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 3.1e-38 162.5 112 65.2
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 4.5e-37 158.7 145 55.9
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.4e-35 153.7 126 61.9
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.4e-35 153.7 103 68.9
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 2.7e-34 149.4 116 62.1
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 8.5e-28 127.9 100 59.0
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 4.7e-26 122.1 91 69.2
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.8e-25 120.2 156 36.5
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.7e-23 112.5 75 65.3
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 1.6e-21 107.1 90 56.7
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 8.5e-20 101.3 68 66.2
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.1e-19 100.9 68 67.6
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.9e-19 100.1 67 67.2
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 5.5e-19 98.6 87 49.4
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 2.3e-17 93.2 145 33.8
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 5.7e-16 88.6 144 29.2
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.8e-14 83.6 45 73.3
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.6e-13 80.5 143 26.6
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 7.2e-11 71.6 67 59.7
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 7.2e-11 71.6 73 49.3


User provided reference genes

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