Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.5e-234 815.1 408 100.0
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.4e-197 691.0 440 82.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 3.6e-193 678.3 440 80.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.2e-181 638.6 440 76.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.1e-176 623.6 440 75.7
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 1.8e-176 622.9 439 75.6
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.2e-175 620.2 440 75.5
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 6.0e-156 554.7 437 68.2
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 7.3e-154 547.7 431 67.1
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.0e-151 539.7 439 64.7
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 5.8e-151 538.1 431 66.6
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.6e-148 530.0 431 67.3
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 4.6e-148 528.5 439 64.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.0e-147 527.3 408 66.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.7e-147 524.6 437 65.7
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.9e-146 523.1 429 65.0
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 5.6e-146 521.5 437 63.8
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.3e-145 520.4 428 65.4
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.3e-145 520.4 429 65.3
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.1e-145 519.6 438 64.8
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 4.8e-145 518.5 447 63.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 5.3e-144 515.0 438 63.9
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 9.0e-144 514.2 421 64.6
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.2e-143 513.8 427 64.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 5.8e-143 511.5 332 76.2
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.7e-142 510.0 401 65.8
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 8.4e-142 507.7 440 62.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 8.4e-142 507.7 439 62.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.9e-141 506.5 328 76.2
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.5e-141 506.1 434 64.5
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.5e-141 506.1 437 62.7
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 4.2e-141 505.4 332 75.9
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.2e-141 505.4 332 75.9
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.2e-141 505.4 332 75.9
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.3e-141 504.2 332 75.9
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.5e-140 502.3 334 74.6
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.5e-140 502.3 439 62.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 4.6e-140 501.9 425 64.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 6.0e-140 501.5 416 63.9
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 6.0e-140 501.5 331 74.0
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 7.9e-140 501.1 332 75.0
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.0e-139 500.7 334 73.4
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 2.3e-139 499.6 422 63.3
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.0e-139 499.2 437 62.9
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 3.0e-139 499.2 421 62.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.0e-139 499.2 422 65.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 3.9e-139 498.8 436 61.9
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 5.1e-139 498.4 336 73.2
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 5.1e-139 498.4 386 66.6
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.1e-139 498.4 335 73.7
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 6.7e-139 498.0 421 62.9
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.1e-138 497.3 427 64.2
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.5e-138 496.9 425 63.1
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.9e-138 496.5 387 66.7
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 5.6e-138 495.0 335 74.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 9.6e-138 494.2 425 63.8
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.8e-137 492.7 422 63.5
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.7e-137 492.3 334 73.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.7e-137 492.3 334 73.7
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 6.2e-137 491.5 389 65.3
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.2e-137 491.1 426 62.0
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.8e-136 490.0 386 65.5
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.4e-136 489.6 402 64.2
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 6.9e-136 488.0 386 64.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 6.9e-136 488.0 420 62.4
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 9.0e-136 487.6 328 73.2
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 9.0e-136 487.6 328 73.2
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.2e-135 487.3 425 62.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.5e-135 486.9 400 63.0
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.5e-135 486.9 337 73.0
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.6e-135 486.1 428 61.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.4e-135 485.7 428 61.4
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.5e-135 485.3 333 72.7
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 5.8e-135 485.0 328 72.3
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 7.6e-135 484.6 321 73.2
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.7e-134 483.4 334 70.4
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.7e-134 483.4 328 72.3
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.7e-134 483.4 328 72.3
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.7e-134 483.4 328 72.0
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.7e-134 483.4 321 73.8
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.2e-134 483.0 411 64.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.2e-134 483.0 490 56.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 2.9e-134 482.6 334 73.4
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 3.8e-134 482.3 334 70.7
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 4.9e-134 481.9 328 72.0
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 6.5e-134 481.5 334 70.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.1e-133 480.7 320 73.8
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.4e-133 480.3 320 75.0
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.5e-133 478.4 334 70.4
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 9.3e-133 477.6 319 72.7
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 7.9e-132 474.6 425 61.2
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.3e-131 473.8 319 73.0
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 5.1e-131 471.9 420 61.9
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 9.7e-130 467.6 402 64.4
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.8e-129 466.1 376 63.0
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 5.9e-127 458.4 414 63.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 2.2e-126 456.4 335 68.1
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 6.5e-126 454.9 301 75.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 5.5e-125 451.8 421 59.4
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.1e-122 444.1 406 60.3
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.3e-122 442.2 406 59.4
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 9.1e-120 434.5 434 56.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 7.2e-117 424.9 335 62.4
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.0e-115 421.0 321 64.2
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.4e-112 410.6 272 75.0
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 7.0e-112 408.3 317 64.0
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.5e-111 406.0 323 62.5
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 8.5e-102 374.8 342 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.8e-97 359.8 272 66.2
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 3.8e-94 349.4 316 58.9
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.7e-81 307.4 314 52.2
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.8e-80 303.9 278 60.1
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 7.0e-80 302.0 337 53.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 6.6e-78 295.4 316 49.4
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 3.0e-70 270.0 320 43.8
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.5e-61 240.4 211 61.1
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.2e-59 232.6 175 68.0
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.7e-57 227.6 187 61.5
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.8e-51 205.7 130 72.3
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.6e-29 132.1 132 54.5
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.4e-24 118.2 107 60.7
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 7.6e-18 95.9 139 40.3
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.7e-17 94.7 61 75.4
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.7e-17 94.7 74 60.8
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.5e-16 90.9 91 52.7
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-14 84.7 185 33.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 9.0e-11 72.4 128 42.2


User provided reference genes

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