Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000425g0080 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.7e-37 158.7 71 100.0
Nitab4.5_0000688g0160 Nicotiana tabacum HOM05D003120 ORTHO05D010952 5.6e-33 143.7 71 91.5
Nitab4.5_0001183g0060 Nicotiana tabacum HOM05D003120 ORTHO05D010952 8.0e-32 139.8 71 87.3
Nitab4.5_0002287g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.0e-26 122.9 60 90.0
Nitab4.5_0000132g0390 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.1e-20 102.8 70 70.0
Nitab4.5_0002512g0040 Nicotiana tabacum HOM05D003120 ORTHO05D010952 5.4e-20 100.5 47 93.6
Nitab4.5_0001701g0130 Nicotiana tabacum HOM05D003120 ORTHO05D010952 2.1e-19 98.6 54 77.8
Nitab4.5_0011072g0020 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.3e-18 95.9 54 75.9
Nitab4.5_0000757g0030 Nicotiana tabacum HOM05D003120 ORTHO05D010952 3.6e-16 87.8 53 69.8
Nitab4.5_0005820g0060 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.1e-15 86.3 52 71.2
Nitab4.5_0001194g0090 Nicotiana tabacum HOM05D003120 ORTHO05D010952 8.9e-15 83.2 53 62.3
Nitab4.5_0006729g0040 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.5e-14 82.4 53 62.3
Peaxi162Scf00204g01521 Petunia axillaris HOM05D003120 ORTHO05D003568 2.6e-14 81.6 54 64.8
Nitab4.5_0009388g0030 Nicotiana tabacum HOM05D011106 ORTHO05D010952 4.4e-14 80.9 53 62.3
Nitab4.5_0003379g0020 Nicotiana tabacum HOM05D003120 ORTHO05D010952 5.8e-14 80.5 53 60.4
Nitab4.5_0000433g0120 Nicotiana tabacum HOM05D003120 ORTHO05D010952 2.2e-13 78.6 53 60.4
Nitab4.5_0001130g0210 Nicotiana tabacum HOM05D003120 ORTHO05D010952 2.2e-13 78.6 53 60.4
Nitab4.5_0006332g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.7e-13 77.8 53 60.4
Nitab4.5_0000026g0170 Nicotiana tabacum HOM05D011106 ORTHO05D010952 4.9e-13 77.4 53 56.6
Peaxi162Scf00167g00047 Petunia axillaris HOM05D003120 ORTHO05D003568 4.9e-13 77.4 54 59.3
CAN.G50.3 Capsicum annuum HOM05D003120 ORTHO05D003568 8.3e-13 76.6 53 62.3
Nitab4.5_0000048g0130 Nicotiana tabacum HOM05D003120 ORTHO05D010952 2.4e-12 75.1 52 59.6
Nitab4.5_0000034g0190 Nicotiana tabacum HOM05D003120 ORTHO05D010952 7.1e-12 73.6 52 61.5
Nitab4.5_0000031g0010 Nicotiana tabacum HOM05D003120 ORTHO05D010952 9.2e-12 73.2 45 64.4
Nitab4.5_0000176g0100 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.2e-11 72.8 53 56.6
Nitab4.5_0000179g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.6e-11 72.4 50 62.0
Nitab4.5_0000025g0330 Nicotiana tabacum HOM05D003120 ORTHO05D003568 1.0e-10 69.7 52 59.6
Nitab4.5_0002180g0050 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.0e-10 69.7 53 56.6
Nitab4.5_0000606g0060 Nicotiana tabacum HOM05D003120 ORTHO05D010952 1.9e-09 65.5 37 73.0
Nitab4.5_0000248g0050 Nicotiana tabacum HOM05D003120 ORTHO05D010952 6.2e-08 60.5 48 50.0
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.1e-08 60.1 52 50.0
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 52 48.1
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 52 48.1
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 52 48.1
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 52 48.1
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 52 48.1
Nitab4.5_0000179g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.2e-07 57.4 42 54.8
COL.COLO4_24166 Corchorus olitorius HOM05D000107 ORTHO05D003213 6.8e-07 57.0 51 41.2
EL10Ac8g19715 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-06 55.1 59 42.4
EL10Ac7g17483 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-06 54.7 66 40.9
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.6e-06 53.5 52 42.3
Nitab4.5_0008143g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 7.6e-06 53.5 31 67.7
Prupe.1G266000 Prunus persica HOM05D000107 ORTHO05D000062 7.6e-06 53.5 52 42.3
AUR62008569 Chenopodium quinoa HOM05D003315 ORTHO05D003407 9.9e-06 53.1 58 39.7


User provided reference genes

Program Settings