Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 1.5e-43 179.1 87 100.0
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 6.2e-34 147.1 78 92.3
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 3.6e-26 121.3 78 76.9
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 6.2e-26 120.6 78 75.6
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 1.8e-25 119.0 85 70.6
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 1.8e-25 119.0 78 75.6
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 6.8e-25 117.1 78 71.8
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 9.9e-24 113.2 78 74.4
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 1.1e-22 109.8 78 67.9
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 1.4e-22 109.4 78 71.8
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 1.4e-22 109.4 78 71.8
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 1.4e-22 109.4 78 71.8
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 1.4e-22 109.4 76 72.4
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 2.4e-22 108.6 78 69.2
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 4.1e-22 107.8 80 72.5
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 4.1e-22 107.8 78 71.8
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 7.1e-22 107.1 78 70.5
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 7.1e-22 107.1 82 65.9
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 1.2e-21 106.3 78 67.9
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 1.6e-21 105.9 76 69.7
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 2.7e-21 105.1 78 66.7
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 4.6e-21 104.4 78 66.7
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 6.0e-21 104.0 81 66.7
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 6.0e-21 104.0 81 65.4
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 7.8e-21 103.6 80 66.2
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 7.8e-21 103.6 77 70.1
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 1.0e-20 103.2 80 65.0
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 1.0e-20 103.2 78 64.1
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 1.7e-20 102.4 72 68.1
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 2.3e-20 102.1 78 67.9
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 3.0e-20 101.7 79 68.4
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 3.9e-20 101.3 78 66.7
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 5.1e-20 100.9 78 65.4
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 5.1e-20 100.9 83 61.4
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 6.6e-20 100.5 78 64.1
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 6.6e-20 100.5 80 66.2
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 8.6e-20 100.1 61 77.0
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 1.1e-19 99.8 72 66.7
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 1.5e-19 99.4 78 61.5
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 1.5e-19 99.4 73 67.1
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 1.5e-19 99.4 78 64.1
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 2.5e-19 98.6 78 64.1
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 3.3e-19 98.2 78 65.4
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 4.3e-19 97.8 66 71.2
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 4.3e-19 97.8 66 71.2
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 4.3e-19 97.8 53 90.6
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 4.3e-19 97.8 61 75.4
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 5.6e-19 97.4 61 75.4
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 7.3e-19 97.1 75 64.0
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 7.3e-19 97.1 81 61.7
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 9.5e-19 96.7 81 60.5
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 9.5e-19 96.7 78 62.8
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 9.5e-19 96.7 83 62.7
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.2e-18 96.3 77 63.6
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 1.6e-18 95.9 88 56.8
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 1.6e-18 95.9 79 58.2
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 2.1e-18 95.5 83 60.2
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 2.1e-18 95.5 78 61.5
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 2.1e-18 95.5 78 59.0
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 2.8e-18 95.1 75 65.3
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 2.8e-18 95.1 67 65.7
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 3.6e-18 94.7 80 62.5
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 1.1e-17 93.2 73 61.6
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 2.4e-17 92.0 78 59.0
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 4.0e-17 91.3 94 53.2
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 5.2e-17 90.9 78 62.8
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 3.4e-16 88.2 73 60.3
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 4.4e-16 87.8 58 70.7
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 5.8e-16 87.4 75 60.0
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 7.6e-16 87.0 54 72.2
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 1.7e-15 85.9 72 63.9
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 1.7e-15 85.9 58 67.2
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 2.2e-15 85.5 75 56.0
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 2.2e-15 85.5 75 60.0
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 3.8e-15 84.7 63 65.1
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 3.8e-15 84.7 65 64.6
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 4.9e-15 84.3 75 54.7
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 6.4e-15 84.0 75 54.7
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 6.4e-15 84.0 116 44.0
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 1.1e-14 83.2 63 63.5
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 1.1e-14 83.2 72 59.7
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 1.4e-14 82.8 73 58.9
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 1.4e-14 82.8 73 58.9
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 1.4e-14 82.8 73 58.9
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 2.4e-14 82.0 58 65.5
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 1.2e-13 79.7 54 66.7
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 4.6e-13 77.8 118 41.5
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 7.8e-13 77.0 46 82.6
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 1.7e-12 75.9 60 63.3
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 1.4e-09 66.2 40 77.5
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 2.4e-09 65.5 36 86.1
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 2.0e-08 62.4 37 78.4


User provided reference genes

Program Settings