Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.5e-144 516.2 262 100.0
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.0e-132 476.9 267 92.1
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.0e-96 356.3 240 80.8
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 5.0e-95 351.7 237 81.0
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 6.1e-93 344.7 236 80.5
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 6.1e-93 344.7 232 80.2
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.2e-87 326.2 244 72.5
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 5.0e-87 325.1 205 82.9
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.2e-86 322.0 247 68.4
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 9.4e-86 320.9 247 71.3
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.1e-85 319.7 244 70.1
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.6e-83 312.8 241 71.0
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 7.4e-83 311.2 241 70.1
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 7.4e-83 311.2 242 67.4
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.2e-82 309.7 243 70.0
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.2e-82 307.8 242 68.6
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.1e-81 307.4 250 66.0
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.8e-81 306.6 240 66.2
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 2.4e-81 306.2 245 69.4
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 9.1e-81 304.3 245 68.2
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 1.5e-80 303.5 242 68.2
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.5e-80 303.5 246 66.3
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 3.5e-80 302.4 241 67.6
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 4.5e-80 302.0 238 68.5
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 4.5e-80 302.0 248 65.7
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 7.7e-80 301.2 232 67.2
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 7.7e-80 301.2 169 87.6
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 2.2e-79 299.7 247 67.6
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 2.9e-79 299.3 245 65.3
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 3.8e-79 298.9 242 66.9
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 6.5e-79 298.1 237 67.1
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 1.1e-78 297.4 250 66.0
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.2e-78 294.7 239 66.5
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.6e-77 293.5 235 67.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 2.1e-77 293.1 175 81.7
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 2.7e-77 292.7 243 66.3
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 8.0e-77 291.2 241 65.1
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.0e-76 290.8 244 64.8
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.4e-76 290.4 224 67.9
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.4e-76 290.4 238 61.8
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 1.4e-76 290.4 232 66.4
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 1.8e-76 290.0 240 65.4
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.8e-76 290.0 233 65.7
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 3.0e-76 289.3 224 67.4
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 5.2e-76 288.5 244 63.5
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 8.8e-76 287.7 240 64.6
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.1e-75 287.3 229 67.7
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.1e-75 287.3 228 64.9
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-75 287.3 238 61.3
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.1e-75 287.3 267 61.4
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 2.0e-75 286.6 250 64.0
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 2.0e-75 286.6 245 64.9
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 3.3e-75 285.8 220 66.4
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 4.4e-75 285.4 233 65.2
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.4e-75 285.4 255 63.5
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 9.7e-75 284.3 195 73.3
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.7e-75 284.3 238 60.5
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 1.3e-74 283.9 229 65.1
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.2e-74 283.1 230 63.9
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.2e-74 283.1 230 63.9
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 2.8e-74 282.7 239 65.3
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 4.8e-74 282.0 175 78.3
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 8.2e-74 281.2 233 64.8
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 4.1e-73 278.9 252 60.3
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 7.0e-73 278.1 233 64.8
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.2e-72 277.3 230 63.0
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.6e-72 276.2 233 63.9
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.9e-72 275.0 284 57.4
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 7.7e-72 274.6 245 59.6
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.3e-71 273.9 226 62.4
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 2.9e-71 272.7 226 62.8
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 3.8e-71 272.3 242 62.0
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 6.5e-71 271.6 241 63.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.5e-70 270.4 231 64.1
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 7.2e-70 268.1 242 60.3
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.2e-69 267.3 209 65.1
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 3.6e-69 265.8 243 60.5
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 4.7e-69 265.4 236 60.2
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 8.0e-69 264.6 248 56.9
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 8.0e-69 264.6 246 56.1
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.4e-68 263.8 247 59.9
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.8e-68 263.5 240 60.4
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 5.2e-68 261.9 246 60.2
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.0e-67 260.0 234 61.1
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 3.4e-67 259.2 235 59.1
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.4e-67 259.2 249 61.8
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 9.7e-67 257.7 228 60.5
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-65 254.2 253 59.7
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-65 254.2 252 58.3
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.1e-65 254.2 252 58.3
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.1e-65 254.2 208 63.0
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 9.1e-65 251.1 243 57.6
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 1.6e-64 250.4 216 62.0
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.1e-62 244.2 212 62.3
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.4e-62 241.1 206 61.7
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 1.6e-61 240.4 137 86.1
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 2.7e-61 239.6 218 57.8
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 5.2e-60 235.3 236 53.0
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 7.5e-59 231.5 268 53.4
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.3e-58 230.7 178 60.7
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.8e-58 229.6 203 63.5
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 3.7e-58 229.2 137 83.2
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 5.9e-56 221.9 237 57.4
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 6.6e-47 191.8 128 72.7
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 9.5e-46 188.0 183 51.9
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.2e-44 182.2 235 50.6
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 2.6e-43 179.9 169 56.8
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 2.2e-42 176.8 175 60.0
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 7.0e-41 171.8 179 45.3
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.0e-40 170.2 159 66.0
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.7e-39 167.2 163 47.9
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 7.3e-38 161.8 88 87.5
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 7.3e-38 161.8 159 59.7
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.7e-37 159.1 216 42.1
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 3.4e-35 152.9 160 58.8
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.9e-26 122.5 135 57.0
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 3.2e-25 119.8 89 66.3
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.9e-22 110.5 68 76.5
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 1.5e-14 84.3 132 34.8
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-14 83.2 220 28.2
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 1.4e-09 67.8 136 31.6
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 6.6e-07 58.9 62 46.8


User provided reference genes

Program Settings