Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 7.4e-188 660.6 391 100.0
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 8.4e-131 471.1 365 71.8
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 6.5e-91 338.6 322 67.7
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.9e-88 329.3 328 60.7
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 7.2e-82 308.5 319 60.2
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 3.9e-80 302.8 339 59.3
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 8.8e-80 301.6 360 59.7
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 2.8e-78 296.6 348 58.3
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 8.2e-78 295.0 364 52.2
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 3.8e-75 286.2 301 60.5
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.1e-74 284.6 351 57.0
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 4.2e-74 282.7 346 54.9
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 5.5e-74 282.3 346 56.4
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.6e-73 280.8 354 60.7
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 1.6e-73 280.8 352 57.1
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 4.7e-73 279.3 356 53.7
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.0e-72 278.1 355 51.0
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 6.7e-72 275.4 339 53.7
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 8.8e-72 275.0 355 50.7
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 8.8e-72 275.0 355 50.4
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 1.1e-71 274.6 356 50.3
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.1e-71 274.6 356 50.3
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.5e-71 274.2 338 53.6
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 2.0e-71 273.9 334 52.1
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.3e-71 273.1 355 50.4
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 4.4e-71 272.7 367 54.2
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 5.7e-71 272.3 350 50.6
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 5.7e-71 272.3 356 51.1
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 1.3e-70 271.2 362 46.1
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 1.3e-70 271.2 339 61.1
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 2.2e-70 270.4 346 51.4
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 2.8e-70 270.0 346 47.7
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 3.7e-70 269.6 350 50.0
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 3.7e-70 269.6 349 50.1
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.1e-69 268.1 350 54.0
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.1e-69 268.1 350 54.3
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.8e-69 267.3 363 52.1
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 4.1e-69 266.2 364 49.2
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 5.3e-69 265.8 377 52.0
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 1.6e-68 264.2 360 49.7
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 2.0e-68 263.8 354 49.7
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 1.3e-67 261.2 359 48.2
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.5e-66 256.9 350 50.0
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 2.7e-65 253.4 357 50.7
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 3.6e-65 253.1 363 47.7
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 6.8e-64 248.8 307 55.0
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 8.8e-64 248.4 354 50.0
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 1.2e-63 248.1 415 42.4
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 3.4e-63 246.5 366 50.0
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 4.4e-63 246.1 378 43.9
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 5.7e-63 245.7 353 46.5
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 9.8e-63 245.0 336 49.7
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 2.8e-62 243.4 315 60.0
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 6.3e-62 242.3 353 54.7
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 8.3e-62 241.9 359 45.7
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 1.1e-61 241.5 369 48.0
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 1.1e-61 241.5 373 46.4
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 1.4e-61 241.1 372 48.1
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 2.4e-61 240.4 371 48.0
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 3.1e-61 240.0 344 51.7
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 4.1e-61 239.6 348 51.4
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 1.2e-60 238.0 367 42.8
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.0e-60 237.3 363 48.8
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 2.7e-60 236.9 353 52.4
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 4.5e-60 236.1 332 50.9
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 4.5e-60 236.1 332 50.9
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 4.5e-60 236.1 332 50.9
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 1.3e-59 234.6 357 48.7
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 1.7e-59 234.2 366 44.5
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.9e-59 233.4 347 48.7
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 2.9e-59 233.4 279 52.3
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 2.9e-59 233.4 347 52.4
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 8.5e-59 231.9 347 51.3
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 4.2e-58 229.6 334 50.6
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 4.7e-57 226.1 347 46.1
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 1.4e-56 224.6 338 51.5
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 4.0e-56 223.0 335 50.4
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 1.5e-55 221.1 376 45.7
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 2.0e-55 220.7 323 47.7
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 2.0e-55 220.7 377 46.2
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 5.7e-55 219.2 367 44.4
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.7e-54 217.6 359 47.4
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.2e-54 217.2 330 49.1
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 2.8e-54 216.9 264 50.8
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.4e-53 214.5 347 40.3
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 3.1e-53 213.4 340 45.3
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 2.0e-52 210.7 331 43.8
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 2.9e-51 206.8 374 41.2
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 3.8e-51 206.5 280 50.4
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.8e-51 206.5 327 45.0
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 1.5e-50 204.5 327 45.3
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 7.3e-50 202.2 265 49.1
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.8e-49 200.3 269 48.3
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 3.6e-49 199.9 332 42.2
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 3.6e-49 199.9 343 45.5
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 3.0e-48 196.8 342 43.6
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 8.9e-48 195.3 271 47.2
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 4.4e-47 193.0 342 53.5
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.3e-46 191.4 327 47.7
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.3e-46 191.4 342 46.2
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.9e-46 190.3 334 51.2
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 6.4e-46 189.1 327 40.1
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 6.4e-46 189.1 346 40.2
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 1.1e-45 188.3 351 46.2
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.4e-45 188.0 334 46.4
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 2.4e-45 187.2 234 50.9
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 5.4e-45 186.0 349 44.1
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 7.0e-45 185.7 342 48.2
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 9.2e-45 185.3 335 43.9
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 1.6e-44 184.5 325 41.2
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 1.6e-44 184.5 268 44.8
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 2.0e-44 184.1 341 42.5
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 2.0e-44 184.1 331 42.9
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 2.7e-44 183.7 344 46.5
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 2.7e-44 183.7 327 41.9
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 3.5e-44 183.3 328 41.5
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 7.8e-44 182.2 331 48.6
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 1.0e-43 181.8 287 49.1
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-43 181.8 332 47.3
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-43 181.8 332 47.3
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 1.0e-43 181.8 332 47.3
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 1.0e-43 181.8 325 41.2
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 1.3e-43 181.4 331 43.2
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 1.7e-43 181.0 343 45.5
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 2.3e-43 180.6 372 46.2
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 3.0e-43 180.3 325 41.2
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 3.0e-43 180.3 332 42.8
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 3.0e-43 180.3 331 47.7
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 3.0e-43 180.3 343 43.4
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 3.0e-43 180.3 225 58.2
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.5e-42 177.9 335 40.9
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 5.6e-42 176.0 329 44.4
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 2.8e-41 173.7 342 42.7
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 3.6e-41 173.3 329 40.7
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 1.4e-40 171.4 259 40.9
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 2.3e-40 170.6 369 44.7
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 7.5e-39 165.6 369 41.5
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 7.5e-39 165.6 369 41.5
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 7.5e-39 165.6 369 41.5
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 9.8e-39 165.2 342 36.5
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-38 164.5 336 41.1
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 6.4e-38 162.5 213 46.9
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 6.4e-38 162.5 352 43.8
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 8.3e-38 162.2 340 36.5
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 2.7e-36 157.1 322 43.5
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 3.0e-35 153.7 254 42.9
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 8.1e-33 145.6 321 34.6
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 2.0e-31 141.0 313 37.7
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 5.8e-31 139.4 352 36.1
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 1.7e-30 137.9 313 37.7
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 2.9e-30 137.1 262 39.3
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 3.7e-30 136.7 332 33.4
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 1.9e-29 134.4 255 39.6
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 7.1e-29 132.5 310 33.5
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 3.5e-28 130.2 341 31.4
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 7.8e-28 129.0 312 35.6
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 1.3e-27 128.3 404 29.7
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-27 127.9 311 35.0
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 1.1e-26 125.2 415 32.8
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 1.9e-26 124.4 97 59.8
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 4.7e-25 119.8 311 34.4
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 6.2e-25 119.4 332 35.5
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 3.0e-19 100.5 178 43.3
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 1.9e-18 97.8 327 36.1
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 9.6e-18 95.5 330 33.6
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 6.2e-17 92.8 195 46.7
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.6e-15 87.4 159 37.1
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 1.7e-14 84.7 180 33.3
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 7.3e-10 69.3 239 28.5
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 1.6e-09 68.2 97 45.4
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 1.6e-09 68.2 199 32.2
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 4.8e-09 66.6 229 29.3
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 6.9e-08 62.8 284 26.1
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 9.9e-07 58.9 281 25.6
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 3.8e-06 57.0 233 28.8
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 6.4e-06 56.2 225 29.3


User provided reference genes

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