Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-239 832.8 424 100.0
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-133 479.2 487 58.7
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.2e-128 462.2 515 55.7
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.8e-102 375.2 358 60.6
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-99 366.7 357 59.9
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-86 323.6 412 51.9
Nitab4.5_0003674g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-81 306.6 371 51.8
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-74 283.5 293 56.3
Nitab4.5_0000623g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-65 253.4 279 56.6
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.2e-63 245.7 517 36.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 5.8e-61 239.2 490 37.1
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.9e-61 238.4 513 34.7
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-60 237.7 529 33.3
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-58 229.9 498 33.9
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-57 228.4 525 33.5
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-57 226.9 525 32.8
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-56 223.0 526 32.3
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 9.9e-53 211.8 521 33.8
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 4.2e-51 206.5 505 33.7
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-46 191.4 447 32.9
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-46 189.5 161 66.5
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 2.6e-45 187.2 318 39.0
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-44 184.5 458 31.4
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.4e-44 182.2 174 59.2
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-43 181.8 408 33.8
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-43 178.7 367 34.9
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-42 177.6 373 34.9
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-42 177.6 431 33.6
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.7e-42 177.2 423 35.5
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-42 176.8 489 30.1
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-42 176.4 424 32.1
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.0e-41 175.3 495 31.5
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-41 174.5 465 31.6
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-41 174.5 424 31.4
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.7e-41 172.2 497 32.2
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-39 165.6 361 34.3
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-38 164.5 427 31.1
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-37 161.8 130 70.8
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-37 161.0 468 29.5
Nitab4.5_0004939g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-37 160.2 135 65.9
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 1.7e-36 157.9 364 34.9
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-35 155.2 380 32.6
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-34 150.6 328 34.1
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-33 147.5 356 32.9
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-33 146.4 413 28.6
Nitab4.5_0004939g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-31 139.8 110 71.8
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-30 138.7 330 31.8
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-30 137.1 316 32.3
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 3.1e-30 137.1 359 32.3
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-28 132.1 262 35.9
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-28 130.6 332 33.7
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.9e-26 122.5 279 34.1
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-25 121.3 367 31.9
PGSC0003DMG400039593 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.7e-25 119.4 276 35.5
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-24 116.7 334 29.0
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 4.3e-24 116.7 328 32.0
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 1.7e-23 114.8 331 33.8
Nitab4.5_0000336g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-23 114.4 167 46.7
Nitab4.5_0003624g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-22 110.2 84 66.7
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-22 110.2 349 28.1
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-22 109.0 189 37.0
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-21 108.2 255 32.9
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-21 107.1 282 31.2
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.4e-21 107.1 132 40.9
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 1.0e-20 105.5 258 33.7
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-19 101.3 161 37.3
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 9.4e-19 99.0 335 28.7
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-18 98.2 203 37.4
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-17 94.7 306 29.1
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 2.3e-17 94.4 306 29.1
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 6.7e-17 92.8 306 28.8
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-16 91.7 65 72.3
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.3e-16 90.5 354 29.7
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-16 89.4 72 63.9
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-15 87.8 117 44.4
Nitab4.5_0003624g0080 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-15 87.0 60 71.7
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 3.7e-15 87.0 182 37.4
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 3.7e-15 87.0 322 31.4
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-15 86.7 290 25.9
PGSC0003DMG400045403 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.3e-15 86.3 98 41.8
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-15 85.9 213 31.9
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-14 84.7 364 29.1
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-14 84.3 66 62.1
PGSC0003DMG400036228 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.6e-13 80.9 66 53.0
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.5e-13 80.1 113 40.7
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.7e-13 79.3 180 32.8
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-12 78.6 60 63.3
PGSC0003DMG400015915 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.3e-12 78.6 66 51.5
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-12 78.2 136 36.8
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-12 77.8 67 59.7
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 5.0e-12 76.6 253 30.0
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 6.5e-12 76.3 403 23.8
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.5e-12 76.3 63 61.9
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.5e-12 76.3 67 58.2
Nitab4.5_0004269g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.5e-12 75.9 106 39.6
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 8.5e-12 75.9 325 29.2
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 8.5e-12 75.9 439 24.6
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-11 75.1 124 38.7
PGSC0003DMG400039936 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-11 75.1 244 31.6
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 3.2e-11 73.9 438 24.2
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.2e-11 73.9 67 55.2
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.5e-11 73.2 67 56.7
CAN.G1088.3 Capsicum annuum HOM05D000995 ORTHO05D001773 1.2e-10 72.0 66 54.5
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 1.2e-10 72.0 129 36.4
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-10 72.0 67 55.2
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-10 71.6 90 44.4
Nitab4.5_0004269g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-10 70.9 123 35.0
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 4.7e-10 70.1 105 38.1
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-10 69.7 372 26.1
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.0e-10 69.3 136 34.6
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.0e-09 68.9 80 47.5
PGSC0003DMG400044720 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-09 68.2 66 47.0
CAN.G1360.3 Capsicum annuum HOM05D000995 ORTHO05D001773 5.2e-09 66.6 66 51.5
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.1e-08 65.5 66 50.0
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-08 65.1 63 55.6
CAN.G959.8 Capsicum annuum HOM05D000995 ORTHO05D001773 2.0e-08 64.7 66 50.0
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 7.4e-08 62.8 310 27.1
Nitab4.5_0000623g0120 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-07 62.0 153 35.3
PGSC0003DMG400044289 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.8e-07 60.8 66 45.5
Nitab4.5_0004591g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-07 60.1 218 29.4
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 2.4e-06 57.8 308 26.6
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.1e-06 55.8 153 29.4


User provided reference genes

Program Settings