Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000415g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.6e-16 88.2 42 100.0
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.9e-12 74.7 40 90.0
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 5.5e-12 73.2 39 89.7
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 9.3e-12 72.4 42 83.3
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 1.9e-09 64.7 40 77.5
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 2.8e-08 60.8 41 70.7
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 3.7e-08 60.5 40 70.0
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 3.7e-08 60.5 39 74.4
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 3.7e-08 60.5 41 65.9
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 4.8e-08 60.1 39 71.8
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 6.2e-08 59.7 40 67.5
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 6.2e-08 59.7 39 71.8
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 6.2e-08 59.7 39 71.8
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 8.2e-08 59.3 39 76.9
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 1.1e-07 58.9 39 71.8
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 1.4e-07 58.5 40 65.0
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.8e-07 58.2 40 67.5
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 2.4e-07 57.8 40 70.0
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 2.4e-07 57.8 38 76.3
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 3.1e-07 57.4 39 69.2
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 3.1e-07 57.4 37 75.7
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 4.0e-07 57.0 41 65.9
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 4.0e-07 57.0 42 64.3
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 5.3e-07 56.6 41 65.9
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 5.3e-07 56.6 40 67.5
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 6.9e-07 56.2 42 61.9
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 6.9e-07 56.2 38 71.1
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 9.0e-07 55.8 40 65.0
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 9.0e-07 55.8 39 69.2
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 9.0e-07 55.8 42 64.3
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 9.0e-07 55.8 40 70.0
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 9.0e-07 55.8 40 67.5
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 9.0e-07 55.8 38 68.4
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 9.0e-07 55.8 40 65.0
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 2.0e-06 54.7 44 61.4
C06p34720 Brassica napus HOM05D003238 ORTHO05D003571 2.0e-06 54.7 44 61.4
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 2.0e-06 54.7 44 61.4
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 2.0e-06 54.7 37 70.3
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.0e-06 54.7 42 64.3
PGSC0003DMG400004852 Solanum tuberosum HOM05D003238 ORTHO05D003571 2.0e-06 54.7 30 83.3
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 2.6e-06 54.3 40 62.5
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 2.6e-06 54.3 43 62.8
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 3.4e-06 53.9 42 64.3
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 3.4e-06 53.9 42 64.3
Aa31LG4G3050 Aethionema arabicum HOM05D003238 ORTHO05D003571 4.5e-06 53.5 42 64.3
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 4.5e-06 53.5 43 65.1
MSTRG.4775 Avicennia marina HOM05D003238 ORTHO05D003571 4.5e-06 53.5 42 66.7
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 4.5e-06 53.5 43 62.8
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 4.5e-06 53.5 42 64.3
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 5.8e-06 53.1 43 62.8
CANSAT56G2721 Cannabis sativa HOM05D003238 ORTHO05D003571 5.8e-06 53.1 42 59.5
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 5.8e-06 53.1 40 62.5
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 5.8e-06 53.1 40 62.5
Migut.D00960 Erythranthe guttata HOM05D003238 ORTHO05D003571 7.6e-06 52.8 42 61.9
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 1.0e-05 52.4 40 65.0
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 1.0e-05 52.4 40 57.5
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 1.0e-05 52.4 39 59.0
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 1.0e-05 52.4 41 58.5


User provided reference genes

Program Settings