Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.3e-97 359.8 182 100.0
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.0e-90 335.9 181 90.6
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.6e-90 335.5 181 90.6
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 9.7e-90 333.6 181 90.1
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 9.7e-90 333.6 181 90.1
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.8e-88 329.3 181 88.4
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 8.0e-76 287.3 181 74.6
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.7e-73 279.6 182 81.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.4e-72 276.6 191 72.8
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 3.1e-72 275.4 181 71.3
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 2.0e-71 272.7 181 71.3
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 3.5e-71 271.9 174 73.6
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 7.7e-71 270.8 172 73.3
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 1.0e-70 270.4 169 74.0
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 1.3e-70 270.0 181 68.5
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 2.9e-70 268.9 182 70.3
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.9e-69 266.2 180 71.1
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.5e-69 265.8 169 72.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.2e-68 263.5 181 70.2
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.7e-68 262.3 183 68.9
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.6e-68 261.9 182 66.5
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 4.7e-68 261.5 162 74.1
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.7e-68 261.5 183 66.7
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 4.0e-67 258.5 177 67.8
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 4.0e-67 258.5 181 66.3
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 5.2e-67 258.1 174 70.7
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 6.8e-67 257.7 179 67.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.2e-66 256.9 170 66.5
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.2e-66 256.9 158 74.7
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.6e-66 255.8 170 68.8
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.4e-66 255.4 170 66.5
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.3e-65 253.4 164 72.6
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.2e-65 252.7 182 66.5
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 3.7e-65 251.9 179 67.6
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 3.7e-65 251.9 174 67.8
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 6.3e-65 251.1 164 72.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 8.3e-65 250.8 182 65.4
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.4e-64 250.0 186 64.5
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.4e-64 249.2 159 69.8
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 5.4e-64 248.1 181 64.6
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.2e-63 246.9 181 64.1
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.7e-63 245.7 175 67.4
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 3.5e-63 245.4 188 63.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.5e-63 245.4 176 64.8
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 4.5e-63 245.0 178 64.0
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.0e-62 243.8 182 62.6
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.0e-62 243.8 182 62.1
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.3e-62 243.4 181 62.4
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.7e-62 243.0 181 62.4
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 2.3e-62 242.7 182 63.7
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.3e-62 242.7 175 66.9
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.9e-62 242.3 181 62.4
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.9e-62 242.3 166 68.7
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 5.0e-62 241.5 181 61.3
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 6.6e-62 241.1 181 60.2
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 8.6e-62 240.7 166 66.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 8.6e-62 240.7 162 67.9
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 8.6e-62 240.7 173 64.7
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.1e-61 240.4 166 66.3
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 1.5e-61 240.0 182 61.5
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.9e-61 239.6 174 67.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 2.5e-61 239.2 181 65.2
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.5e-61 239.2 181 60.8
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.5e-61 239.2 171 68.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 2.5e-61 239.2 164 66.5
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 5.6e-61 238.0 181 61.9
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 5.6e-61 238.0 181 60.2
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 7.3e-61 237.7 180 61.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 7.3e-61 237.7 170 65.9
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 9.5e-61 237.3 184 63.6
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.8e-60 235.7 175 61.7
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.7e-60 235.0 184 63.0
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 6.1e-60 234.6 184 60.9
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.1e-60 234.6 184 62.5
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 1.0e-59 233.8 184 60.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.0e-59 233.8 175 63.4
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.4e-59 233.4 156 67.3
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.8e-59 233.0 183 60.7
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 2.3e-59 232.6 197 59.4
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 4.0e-59 231.9 189 59.8
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 6.8e-59 231.1 198 58.6
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 6.8e-59 231.1 183 60.7
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 8.9e-59 230.7 184 59.8
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 8.9e-59 230.7 181 59.7
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 8.9e-59 230.7 181 59.7
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.2e-58 230.3 180 60.6
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 7.5e-58 227.6 174 65.5
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 7.5e-58 227.6 174 59.8
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 8.3e-57 224.2 208 56.2
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.1e-56 223.8 181 59.7
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 3.2e-56 222.2 185 58.4
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.9e-54 215.3 178 56.7
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 5.0e-54 214.9 168 60.1
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 5.0e-54 214.9 182 57.7
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.5e-53 213.4 181 60.8
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 7.3e-53 211.1 282 42.2
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 8.3e-49 197.6 120 76.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 9.2e-48 194.1 182 50.0
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 9.2e-48 194.1 138 63.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 2.1e-44 183.0 180 48.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.4e-40 170.2 155 51.6
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 7.1e-40 167.9 100 87.0
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.4e-35 153.7 154 46.8
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 4.0e-35 152.1 129 57.4
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 4.0e-35 152.1 157 42.0
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.6e-31 138.7 90 81.1
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 8.6e-30 134.4 112 57.1
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-23 111.7 77 74.0
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.3e-22 109.8 165 36.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 3.0e-22 109.4 197 35.5
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 3.0e-22 109.4 152 40.1
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 6.2e-20 101.7 66 68.2
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 2.7e-07 59.7 51 47.1
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 6.0e-07 58.5 100 33.0


User provided reference genes

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