Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-85 320.1 166 100.0
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 8.6e-77 290.4 159 93.1
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 2.6e-65 252.3 167 80.8
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 6.4e-64 247.7 164 77.4
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 7.3e-60 234.2 167 74.9
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.8e-59 232.3 167 74.3
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.1e-58 228.8 167 74.3
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.3e-53 213.4 166 68.7
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.3e-52 207.6 166 66.9
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.3e-48 196.8 166 62.7
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 5.1e-45 184.9 163 60.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.5e-44 183.3 164 61.6
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 3.6e-43 178.7 164 60.4
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 4.8e-43 178.3 164 60.4
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.1e-39 167.2 166 57.2
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.9e-39 166.4 166 57.2
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 9.3e-39 164.1 165 57.6
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.1e-38 162.9 165 57.6
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 3.9e-37 158.7 164 53.0
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.1e-37 158.3 163 54.6
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.1e-37 158.3 163 54.6
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.3e-35 153.7 163 52.8
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 2.1e-35 152.9 163 53.4
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.1e-35 152.9 164 52.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 4.8e-35 151.8 163 52.8
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.2e-33 147.1 163 51.5
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.2e-33 147.1 164 50.0
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 2.6e-33 146.0 163 50.9
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 4.5e-33 145.2 165 52.1
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 7.6e-33 144.4 168 52.4
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.3e-32 143.7 163 51.5
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.3e-32 143.7 164 49.4
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 4.9e-32 141.7 173 52.6
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 6.5e-32 141.4 165 50.9
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.4e-31 140.2 163 48.5
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.5e-31 139.4 164 48.2
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 3.2e-31 139.0 167 50.9
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 4.2e-31 138.7 167 50.3
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 4.2e-31 138.7 163 50.3
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.5e-31 138.3 163 49.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 9.3e-31 137.5 163 52.1
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.6e-30 136.7 164 48.8
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.6e-30 136.7 164 48.8
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 2.1e-30 136.3 176 48.3
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.1e-30 136.3 164 50.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.1e-30 136.3 163 48.5
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.1e-30 136.3 169 52.1
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 2.7e-30 136.0 166 50.6
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.7e-30 136.0 164 50.6
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.7e-30 136.0 175 50.9
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 3.5e-30 135.6 167 47.3
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.6e-30 135.2 167 50.3
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 4.6e-30 135.2 166 50.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.0e-30 134.8 166 48.8
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 7.9e-30 134.4 172 49.4
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.0e-29 134.0 163 48.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.0e-29 134.0 163 48.5
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.8e-29 133.3 171 48.0
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.8e-29 133.3 163 50.3
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 2.3e-29 132.9 164 48.2
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.1e-29 131.7 164 47.6
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.1e-29 131.7 164 47.0
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 8.7e-29 131.0 166 44.0
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.9e-28 129.8 166 51.2
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.9e-28 129.8 164 47.0
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 3.3e-28 129.0 172 48.3
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.4e-28 127.9 168 46.4
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.6e-27 126.7 168 45.8
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.8e-27 125.9 176 47.7
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 8.2e-27 124.4 176 44.9
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 5.3e-26 121.7 169 47.3
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.0e-26 120.9 164 45.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.5e-25 120.2 164 50.6
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.4e-25 119.0 164 45.7
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.3e-24 117.1 164 43.9
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.3e-24 117.1 168 43.5
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.7e-24 116.7 163 46.6
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.8e-24 115.5 168 45.2
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 5.0e-24 115.2 148 49.3
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 6.5e-24 114.8 170 45.3
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.5e-24 114.8 168 44.6
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.4e-23 113.6 162 46.9
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.9e-23 113.2 165 44.8
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 5.5e-23 111.7 163 46.6
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 9.3e-23 110.9 139 49.6
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 2.1e-22 109.8 169 46.2
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.0e-21 105.9 168 40.5
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 3.0e-21 105.9 178 42.7
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 5.1e-21 105.1 157 43.9
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.1e-20 104.0 211 38.9
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.1e-20 104.0 157 42.0
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.5e-20 103.6 169 39.1
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.9e-20 103.2 191 41.4
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.9e-20 103.2 191 41.4
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 2.5e-20 102.8 211 38.9
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.5e-20 102.8 171 43.3
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 3.3e-20 102.4 188 41.0
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 4.3e-20 102.1 188 41.0
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 7.4e-20 101.3 174 42.5
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.6e-19 100.1 189 38.6
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 2.2e-19 99.8 187 39.0
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 2.8e-19 99.4 163 39.3
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 6.3e-19 98.2 169 39.1
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 8.2e-19 97.8 171 41.5
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.4e-18 97.1 170 40.0
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.4e-18 96.3 165 41.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 9.0e-18 94.4 205 37.1
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 2.0e-17 93.2 207 35.7
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.4e-17 92.4 160 41.9
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 1.0e-16 90.9 188 35.6
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.3e-16 90.5 187 36.4
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.3e-16 90.5 188 37.8
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.1e-15 87.4 169 33.7
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 9.4e-15 84.3 167 35.3
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.6e-14 83.6 165 37.0
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.6e-14 82.0 153 39.9
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 7.9e-14 81.3 141 39.7
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.8e-13 80.1 167 40.7
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.3e-13 79.7 165 37.0
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.9e-13 79.0 163 35.6
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 8.8e-13 77.8 162 35.2
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 1.5e-12 77.0 158 39.2
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 3.3e-12 75.9 162 34.6
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 7.4e-12 74.7 155 35.5
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.7e-11 73.6 168 39.9
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 2.8e-11 72.8 134 39.6
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 3.1e-10 69.3 193 34.2
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-08 63.9 153 32.7
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 2.2e-08 63.2 167 37.1
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.0e-08 62.0 154 35.1
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 4.7e-06 55.5 67 47.8


User provided reference genes

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