Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.9e-72 275.8 143 100.0
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 3.1e-59 231.9 144 84.0
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.5e-57 223.8 144 79.9
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.9e-56 222.6 143 83.2
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 4.2e-56 221.5 144 81.2
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 4.7e-55 218.0 143 78.3
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.0e-54 215.3 143 79.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-52 209.1 143 76.2
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 4.1e-51 204.9 144 77.8
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.6e-50 203.0 137 81.0
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.0e-50 202.6 143 76.2
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.0e-47 190.7 144 72.9
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 5.7e-45 184.5 144 68.8
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.3e-44 183.3 144 67.4
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 1.6e-42 176.4 137 73.7
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 6.5e-41 171.0 145 64.8
Nitab4.5_0000397g0180 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-38 163.7 115 79.1
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 3.7e-36 155.2 144 61.1
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 7.0e-35 151.0 124 64.5
Nitab4.5_0006918g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.9e-34 147.9 76 94.7
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 5.9e-34 147.9 144 61.1
CAN.G257.108 Capsicum annuum HOM05D006536 ORTHO05D005877 6.2e-23 111.3 89 65.2
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 7.8e-18 94.4 140 41.4
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.7e-17 93.2 138 42.8
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.0e-17 92.4 148 41.9
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 3.0e-17 92.4 147 40.8
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.9e-17 92.0 156 39.1
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-17 91.7 148 40.5
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.6e-17 91.3 147 43.5
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 8.6e-17 90.9 144 43.1
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.1e-16 90.5 142 40.8
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.9e-16 89.7 77 62.3
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 3.3e-16 89.0 146 40.4
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 2.8e-15 85.9 145 37.9
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 2.8e-15 85.9 113 41.6
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 4.7e-15 85.1 154 39.6
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 6.2e-15 84.7 144 37.5
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 6.2e-15 84.7 156 36.5
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 8.1e-15 84.3 145 37.9
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.4e-14 83.6 144 38.2
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.8e-14 83.2 148 41.9
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.8e-14 83.2 147 40.1
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.8e-14 83.2 152 37.5
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.8e-14 83.2 135 38.5
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.8e-14 83.2 114 42.1
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 5.2e-14 81.6 148 36.5
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 8.9e-14 80.9 147 37.4
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 8.9e-14 80.9 156 37.8
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.2e-13 80.5 150 37.3
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 3.4e-13 79.0 144 37.5
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 3.4e-13 79.0 145 36.6
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-13 78.2 151 34.4
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 7.5e-13 77.8 146 37.0
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.3e-12 77.0 145 37.2
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 1.7e-12 76.6 114 46.5
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.2e-12 76.3 151 34.4
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 3.7e-12 75.5 142 38.0
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 6.4e-12 74.7 119 38.7
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.4e-12 74.7 155 34.2
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 8.3e-12 74.3 145 38.6
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 1.4e-11 73.6 153 33.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.9e-11 73.2 147 38.8
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-11 73.2 151 33.1
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.4e-11 72.8 142 35.9
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 5.4e-11 71.6 150 39.3
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 7.1e-11 71.2 143 38.5
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 7.1e-11 71.2 152 38.2
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 9.2e-11 70.9 152 33.6
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 1.6e-10 70.1 146 35.6
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.1e-10 69.7 145 36.6
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 2.1e-10 69.7 147 35.4
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 6.0e-10 68.2 138 37.0
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.0e-10 68.2 113 39.8
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 7.8e-10 67.8 104 35.6
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 7.8e-10 67.8 149 34.2
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.8e-10 67.8 130 35.4
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 1.0e-09 67.4 133 34.6
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 1.3e-09 67.0 133 33.1
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 1.3e-09 67.0 160 31.2
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.3e-09 67.0 151 32.5
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.3e-09 67.0 151 32.5
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.3e-09 67.0 151 32.5
Sabra02G0106400 Salix brachista HOM05D006536 ORTHO05D005877 1.7e-09 66.6 107 40.2
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.7e-09 66.6 139 34.5
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 2.3e-09 66.2 145 33.1
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.3e-09 66.2 143 33.6
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.3e-09 66.2 154 32.5
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 3.0e-09 65.9 155 31.6
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 3.0e-09 65.9 140 33.6
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 3.0e-09 65.9 140 33.6
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.9e-09 65.5 154 33.8
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 3.9e-09 65.5 153 32.7
Oeu007646.1 Olea europaea HOM05D006536 ORTHO05D005877 3.9e-09 65.5 142 33.1
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 5.1e-09 65.1 150 33.3
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 5.1e-09 65.1 145 34.5
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 6.6e-09 64.7 92 38.0
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 8.6e-09 64.3 146 28.1
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 1.1e-08 63.9 152 32.2
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 1.1e-08 63.9 143 37.1
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.5e-08 63.5 154 31.8
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 1.5e-08 63.5 147 34.7
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 1.5e-08 63.5 113 38.1
SalBow3G3753 Salvia bowleyana HOM05D006536 ORTHO05D005877 1.5e-08 63.5 78 48.7
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.9e-08 63.2 95 35.8
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.5e-08 62.8 145 33.8
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 2.5e-08 62.8 147 32.0
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 3.3e-08 62.4 151 27.2
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.3e-08 62.4 154 31.8
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 3.3e-08 62.4 150 33.3
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.3e-08 62.4 151 33.1
GSVIVG01001973001 Vitis vinifera HOM05D006536 ORTHO05D005877 4.3e-08 62.0 112 41.1
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 5.6e-08 61.6 125 32.8
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 5.6e-08 61.6 155 32.9
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 9.5e-08 60.8 120 32.5
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 9.5e-08 60.8 148 31.8
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 9.5e-08 60.8 95 34.7
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 9.5e-08 60.8 148 33.8
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 9.5e-08 60.8 148 32.4
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 9.5e-08 60.8 147 32.7
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 9.5e-08 60.8 107 35.5
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.2e-07 60.5 145 33.1
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 1.2e-07 60.5 147 33.3
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 1.2e-07 60.5 152 36.8
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-07 60.1 157 35.0
Lsat_1_v5_gn_7_108020 Lactuca sativa HOM05D006536 ORTHO05D005877 1.6e-07 60.1 146 32.9
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.6e-07 60.1 147 34.0
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 2.1e-07 59.7 132 30.3
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 2.8e-07 59.3 158 34.2
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 2.8e-07 59.3 137 30.7
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 2.8e-07 59.3 136 33.1
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 3.6e-07 58.9 141 27.7
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 4.7e-07 58.5 120 34.2
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 6.2e-07 58.2 141 28.4
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.1e-06 57.4 143 32.9
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.4e-06 56.2 152 33.6
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 2.4e-06 56.2 152 34.2
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 3.1e-06 55.8 144 27.8
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.1e-06 55.8 141 29.1
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 3.1e-06 55.8 122 32.0
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 4.0e-06 55.5 163 35.6
Gohir.D01G062500 Gossypium hirsutum HOM05D015826 ORTHO05D005877 4.0e-06 55.5 147 33.3
Gorai.002G083200 Gossypium raimondii HOM05D015826 ORTHO05D005877 4.0e-06 55.5 147 33.3
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 5.2e-06 55.1 160 31.9
Gohir.A01G075200 Gossypium hirsutum HOM05D015826 ORTHO05D005877 5.2e-06 55.1 147 31.3
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 5.2e-06 55.1 129 31.0
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.2e-06 55.1 164 34.8
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.2e-06 55.1 110 32.7
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 6.8e-06 54.7 144 29.2
MBI18_g46234_MAGBIO Magnolia biondii HOM05D009374 ORTHO05D005877 8.9e-06 54.3 113 31.9
PGR083G0669 Punica granatum HOM05D006536 ORTHO05D005877 8.9e-06 54.3 148 33.1
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 8.9e-06 54.3 115 31.3


User provided reference genes

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