Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000397g0160 Nicotiana tabacum HOM05D006170 ORTHO05D007794 1.5e-97 359.4 166 100.0
Peaxi162Scf01086g00027 Petunia axillaris HOM05D006170 ORTHO05D007794 2.8e-75 285.4 189 74.6
CAN.G337.156 Capsicum annuum HOM05D006170 ORTHO05D007794 1.1e-71 273.5 188 73.4
PGSC0003DMG400019265 Solanum tuberosum HOM05D006170 ORTHO05D007794 5.4e-71 271.2 184 73.9
Solyc07g064020.4 Solanum lycopersicum HOM05D006170 ORTHO05D007794 3.1e-66 255.4 180 71.1
Sopen07g032160 Solanum pennellii HOM05D006170 ORTHO05D007794 3.6e-51 205.3 153 68.6
RhsimUnG0253700 Rhododendron simsii HOM05D006170 ORTHO05D007794 1.1e-50 203.8 182 57.1
Cc05_g13150 Coffea canephora HOM05D006170 ORTHO05D007794 1.8e-50 203.0 181 56.4
Dinv22315 Davidia involucrata HOM05D006170 ORTHO05D007794 2.4e-50 202.6 178 53.9
CSS0048908 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 9.0e-50 200.7 178 55.6
QL08p013814 Quercus lobata HOM05D006170 ORTHO05D007794 4.4e-49 198.4 177 55.4
Nitab4.5_0002238g0030 Nicotiana tabacum HOM05D006170 ORTHO05D007794 5.8e-49 198.0 168 65.5
CSS0004985 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 2.9e-48 195.7 178 54.5
Actinidia09955 Actinidia chinensis HOM05D006170 ORTHO05D007794 4.9e-48 194.9 180 52.2
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 4.9e-48 194.9 181 54.1
TAR627G0202 Trochodendron aralioides HOM05D006170 ORTHO05D007794 4.9e-48 194.9 178 55.6
Haze_09591 Corylus avellana HOM05D006170 ORTHO05D007794 6.4e-48 194.5 178 54.5
Ciclev10009527m.g Citrus clementina HOM05D006170 ORTHO05D007794 8.4e-48 194.1 180 53.3
Cfa020437 Carpinus fangiana HOM05D006170 ORTHO05D007794 1.4e-47 193.4 178 53.9
TAR627G0053 Trochodendron aralioides HOM05D006170 ORTHO05D007794 1.9e-47 193.0 178 55.1
GSVIVG01014582001 Vitis vinifera HOM05D006170 ORTHO05D007794 1.9e-47 193.0 178 53.9
Atru.chr2.3180 Acer truncatum HOM05D006170 ORTHO05D007794 2.4e-47 192.6 187 51.9
vmacro09751 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 3.2e-47 192.2 180 53.9
COL.COLO4_09554 Corchorus olitorius HOM05D006170 ORTHO05D007794 7.1e-47 191.0 175 51.4
Lj8A165T103 Lonicera japonica HOM05D006170 ORTHO05D007794 9.3e-47 190.7 180 51.1
Thecc.07G055300 Theobroma cacao HOM05D006170 ORTHO05D007794 1.2e-46 190.3 180 50.6
Duzib213G0548 Durio zibethinus HOM05D006170 ORTHO05D007794 1.6e-46 189.9 180 51.1
Potri.011G131800 Populus trichocarpa HOM05D006170 ORTHO05D007794 1.6e-46 189.9 195 48.7
Sabra11G0118800 Salix brachista HOM05D006170 ORTHO05D007794 2.7e-46 189.1 195 48.2
CiPaw.11G182800 Carya illinoinensis HOM05D006170 ORTHO05D007794 6.0e-46 188.0 176 51.7
Duzib268G1633 Durio zibethinus HOM05D006170 ORTHO05D007794 1.0e-45 187.2 188 50.5
Nn1g06950 Nelumbo nucifera HOM05D006170 ORTHO05D007794 1.3e-45 186.8 178 52.8
Potri.001G416200 Populus trichocarpa HOM05D006170 ORTHO05D007794 1.3e-45 186.8 180 50.6
MBI18_g24149_MAGBIO Magnolia biondii HOM05D006170 ORTHO05D007794 3.0e-45 185.7 177 50.3
Manes.03G122000 Manihot esculenta HOM05D006170 ORTHO05D007794 3.0e-45 185.7 181 51.9
Glyma.12G215300 Glycine max HOM05D006170 ORTHO05D007794 5.1e-45 184.9 178 51.7
Glyma.13G286300 Glycine max HOM05D006170 ORTHO05D007794 8.7e-45 184.1 178 52.2
FvH4_3g21680 Fragaria vesca HOM05D006170 ORTHO05D007794 1.5e-44 183.3 188 48.4
CiPaw.12G125700 Carya illinoinensis HOM05D006170 ORTHO05D007794 1.9e-44 183.0 177 51.4
Lj3g0005940 Lotus japonicus HOM05D006170 ORTHO05D007794 1.9e-44 183.0 176 52.8
VMungo1080G0982 Vigna mungo HOM05D006170 ORTHO05D007794 1.9e-44 183.0 178 50.6
FAN25G0963 Fragaria x ananassa HOM05D006170 ORTHO05D007794 2.5e-44 182.6 188 48.4
RcHm_v2.0_Chr5g0037161 Rosa chinensis HOM05D006170 ORTHO05D007794 2.5e-44 182.6 184 48.9
Gohir.A13G141800 Gossypium hirsutum HOM05D006170 ORTHO05D007794 3.3e-44 182.2 180 50.0
Sabra16G0282800 Salix brachista HOM05D006170 ORTHO05D007794 3.3e-44 182.2 179 49.7
Gorai.013G164300 Gossypium raimondii HOM05D006170 ORTHO05D007794 4.3e-44 181.8 180 50.0
SalBow7G2464 Salvia bowleyana HOM05D006170 ORTHO05D007794 4.3e-44 181.8 178 51.7
TWI39G0874 Tripterygium wilfordii HOM05D006170 ORTHO05D007794 4.3e-44 181.8 190 47.4
Lsat_1_v5_gn_7_108120 Lactuca sativa HOM05D006170 ORTHO05D007794 7.3e-44 181.0 172 50.0
Phvul.005G090600 Phaseolus vulgaris HOM05D006170 ORTHO05D007794 7.3e-44 181.0 178 50.6
PSO832G2973 Papaver somniferum HOM05D006170 ORTHO05D007794 9.6e-44 180.6 187 50.3
Aqoxy1G03815 Aquilegia oxysepala HOM05D006170 ORTHO05D007794 2.1e-43 179.5 179 51.4
Ah.04g165500 Amaranthus hybridus HOM05D006170 ORTHO05D007794 2.8e-43 179.1 165 53.3
FAN16G2181 Fragaria x ananassa HOM05D006170 ORTHO05D007794 2.8e-43 179.1 188 47.3
FAN21G2913 Fragaria x ananassa HOM05D006170 ORTHO05D007794 2.8e-43 179.1 188 47.9
PSO210G3318 Papaver somniferum HOM05D006170 ORTHO05D007794 3.6e-43 178.7 186 49.5
Lalb_Chr22g0357121 Lupinus albus HOM05D006170 ORTHO05D007794 4.8e-43 178.3 178 49.4
EL10Ac4g07990 Beta vulgaris HOM05D006170 ORTHO05D007794 1.1e-42 177.2 178 50.0
Hund23320 Selenicereus undatus HOM05D006170 ORTHO05D007794 1.1e-42 177.2 177 49.7
Gohir.D13G146500 Gossypium hirsutum HOM05D006170 ORTHO05D007794 1.8e-42 176.4 180 50.0
Manes.15G077500 Manihot esculenta HOM05D006170 ORTHO05D007794 1.8e-42 176.4 178 50.0
arahy.Tifrunner.gnm1.ann1.I4GK8M Arachis hypogaea HOM05D006170 ORTHO05D007794 2.4e-42 176.0 184 47.8
Medtr2g082180 Medicago truncatula HOM05D006170 ORTHO05D007794 2.4e-42 176.0 177 49.2
arahy.Tifrunner.gnm1.ann1.IBV8H8 Arachis hypogaea HOM05D006170 ORTHO05D007794 5.3e-42 174.9 186 47.3
ClCG10G005700 Citrullus lanatus HOM05D006170 ORTHO05D007794 5.3e-42 174.9 181 49.7
Gohir.A01G073600 Gossypium hirsutum HOM05D006170 ORTHO05D007794 9.0e-42 174.1 182 50.0
Eucgr.F00998 Eucalyptus grandis HOM05D006170 ORTHO05D007794 1.2e-41 173.7 179 46.9
Gohir.D01G060200 Gossypium hirsutum HOM05D006170 ORTHO05D007794 2.0e-41 172.9 182 49.5
PGR083G1948 Punica granatum HOM05D006170 ORTHO05D007794 2.0e-41 172.9 181 47.5
Gorai.002G081600 Gossypium raimondii HOM05D006170 ORTHO05D007794 2.6e-41 172.6 182 49.5
TPR.G36813 Trifolium pratense HOM05D006170 ORTHO05D007794 2.6e-41 172.6 177 47.5
Sed0018130 Sechium edule HOM05D006170 ORTHO05D007794 7.6e-41 171.0 181 47.0
unitig_37.g12585 Utricularia gibba HOM05D006170 ORTHO05D007794 9.9e-41 170.6 174 49.4
Psat5g249640 Pisum sativum HOM05D006170 ORTHO05D007794 1.3e-40 170.2 179 48.0
AUR62029239 Chenopodium quinoa HOM05D006170 ORTHO05D007794 1.7e-40 169.9 162 50.6
Cpa.g.sc97.82 Carica papaya HOM05D006170 ORTHO05D007794 3.8e-40 168.7 180 46.1
BcaB05g22153 Brassica carinata HOM05D006170 ORTHO05D007794 4.9e-40 168.3 173 47.4
A02p10120 Brassica napus HOM05D006170 ORTHO05D007794 4.9e-40 168.3 173 47.4
BraA02t06083Z Brassica rapa HOM05D006170 ORTHO05D007794 4.9e-40 168.3 173 47.4
AUR62015633 Chenopodium quinoa HOM05D006170 ORTHO05D007794 4.9e-40 168.3 162 50.0
Ca_01769_v3 Cicer arietinum L. HOM05D006170 ORTHO05D007794 4.9e-40 168.3 177 47.5
Lalb_Chr14g0366041 Lupinus albus HOM05D006170 ORTHO05D007794 6.4e-40 167.9 179 49.2
MD03G1213300 Malus domestica HOM05D006170 ORTHO05D007794 8.4e-40 167.5 193 47.7
MD11G1228200 Malus domestica HOM05D006170 ORTHO05D007794 8.4e-40 167.5 185 48.6
Atru.chr2.3190 Acer truncatum HOM05D006170 ORTHO05D007794 1.1e-39 167.2 155 52.9
ECA236G0468 Erigeron canadensis HOM05D006170 ORTHO05D007794 1.9e-39 166.4 176 49.4
Sc03g0009170 Simmondsia chinensis HOM05D006170 ORTHO05D007794 7.1e-39 164.5 180 44.4
CsaV3_3G005420 Cucumis sativus L. HOM05D006170 ORTHO05D007794 9.3e-39 164.1 182 48.4
SGA_v2.0_scaffold34G13954 Striga asiatica HOM05D000141 ORTHO05D001968 9.3e-39 164.1 182 47.3
CDE05G2462 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 1.2e-38 163.7 177 45.8
Migut.M01817 Erythranthe guttata HOM05D006170 ORTHO05D007794 1.6e-38 163.3 191 45.5
BcaC03g14298 Brassica carinata HOM05D006170 ORTHO05D007794 4.6e-38 161.8 173 46.2
C02p16810 Brassica napus HOM05D006170 ORTHO05D007794 4.6e-38 161.8 173 46.2
BolC2t07784H Brassica oleracea HOM05D006170 ORTHO05D007794 4.6e-38 161.8 173 46.2
Thhalv10014749m.g Eutrema salsugineum HOM05D006170 ORTHO05D007794 4.6e-38 161.8 177 46.9
HanXRQChr11g0332711 Helianthus annuus HOM05D006170 ORTHO05D007794 4.6e-38 161.8 171 48.5
MELO3C025424.2 Cucumis melo HOM05D006170 ORTHO05D007794 1.8e-37 159.8 182 47.3
VMungo1127G1132 Vigna mungo HOM05D006170 ORTHO05D007794 1.8e-37 159.8 178 46.6
Sp6g16620 Schrenkiella parvula HOM05D006170 ORTHO05D007794 2.3e-37 159.5 177 46.3
AT5G54660 Arabidopsis thaliana HOM05D006170 ORTHO05D007794 3.0e-37 159.1 177 45.2
BcaC04g20316 Brassica carinata HOM05D006170 ORTHO05D007794 3.9e-37 158.7 177 46.3
BolC9t57379H Brassica oleracea HOM05D006170 ORTHO05D007794 3.9e-37 158.7 177 46.3
C09p45040 Brassica napus HOM05D006170 ORTHO05D007794 5.1e-37 158.3 177 45.8
BcaB08g35828 Brassica carinata HOM05D006170 ORTHO05D007794 6.7e-37 157.9 176 46.0
CANSAT11G1152 Cannabis sativa HOM05D006170 ORTHO05D007794 8.7e-37 157.5 190 47.4
HPP92_000867 Vanilla planifolia HOM05D006170 ORTHO05D007794 2.5e-36 156.0 178 43.8
Carub.0008s1492 Capsella rubella HOM05D006170 ORTHO05D007794 3.3e-36 155.6 177 45.2
AL8G30110 Arabidopsis lyrata HOM05D006170 ORTHO05D007794 4.3e-36 155.2 178 45.5
Aa31LG3G10590 Aethionema arabicum HOM05D006170 ORTHO05D007794 1.6e-35 153.3 177 43.5
BraA10t43291Z Brassica rapa HOM05D006170 ORTHO05D007794 3.7e-35 152.1 177 44.6
THA.LOC104799886 Tarenaya hassleriana HOM05D006170 ORTHO05D007794 6.2e-35 151.4 184 44.0
CDE05G1194 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 4.2e-31 138.7 177 41.2
A10p11950 Brassica napus HOM05D006170 ORTHO05D007794 2.1e-30 136.3 224 35.7
Zm00001eb291920 Zea mays HOM05D006170 ORTHO05D007794 1.5e-28 130.2 164 43.9
Os05g0500500 Oryza sativa ssp. japonica HOM05D006170 ORTHO05D007794 1.9e-28 129.8 173 41.0
Zm00001eb352720 Zea mays HOM05D006170 ORTHO05D007794 9.6e-28 127.5 162 43.2
Oeu013861.1 Olea europaea HOM05D000359 ORTHO05D000251 2.6e-25 119.4 87 65.5
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 7.6e-25 117.9 87 59.8
Atru.chr2.3169 Acer truncatum HOM05D006170 ORTHO05D007794 3.8e-24 115.5 111 51.4
Atru.chr2.3172 Acer truncatum HOM05D006170 ORTHO05D007794 3.8e-24 115.5 113 51.3
Atru.chr2.3179 Acer truncatum HOM05D006170 ORTHO05D007794 1.9e-23 113.2 92 58.7
Atru.chr2.3188 Acer truncatum HOM05D006170 ORTHO05D007794 1.9e-23 113.2 92 58.7
CARHR267970 Cardamine hirsuta HOM05D006170 ORTHO05D007794 5.7e-20 101.7 82 53.7
ATR1088G045 Amborella trichopoda HOM05D006170 ORTHO05D007794 5.3e-18 95.1 172 36.6
vmacro22724 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 5.3e-18 95.1 111 46.8
Nitab4.5_0000104g0260 Nicotiana tabacum HOM05D006170 ORTHO05D007794 1.0e-16 90.9 41 97.6
Prupe.4G201100 Prunus persica HOM05D006170 ORTHO05D007794 4.2e-15 85.5 117 41.0
SEGI_04384 Sequoiadendron giganteum HOM05D006170 ORTHO05D000001 6.7e-13 78.2 131 35.9
Medtr0769s0020 Medicago truncatula HOM05D006170 ORTHO05D007794 8.8e-13 77.8 70 48.6
SEGI_21038 Sequoiadendron giganteum HOM05D000136 ORTHO05D007794 4.5e-09 65.5 167 29.9


User provided reference genes

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