Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-71 270.8 141 100.0
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-37 159.8 102 86.3
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-36 156.0 102 84.3
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-35 152.5 102 82.4
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-34 149.8 102 80.4
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-34 149.8 102 81.4
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-34 147.5 102 81.4
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-34 147.5 100 82.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-32 141.7 102 77.5
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-32 141.7 102 78.4
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-31 139.4 102 78.4
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-31 138.3 103 77.7
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.9e-31 137.5 96 79.2
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.9e-31 137.5 101 75.2
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-30 134.4 101 74.3
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-29 133.7 92 79.3
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-29 132.1 101 74.3
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-29 131.3 102 74.5
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-29 131.0 102 74.5
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-28 130.2 100 71.0
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-28 129.8 103 71.8
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-28 127.5 81 84.0
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-27 126.7 80 85.0
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-27 126.3 89 74.2
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-27 124.8 103 68.9
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-26 121.7 80 82.5
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-26 121.3 79 82.3
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-26 120.9 78 83.3
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-25 120.6 78 82.1
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-25 119.8 94 72.3
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-25 118.2 79 81.0
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-24 117.1 85 77.6
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-24 115.2 87 75.9
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-24 115.2 79 81.0
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-24 114.8 92 70.7
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-23 113.2 86 75.6
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-23 112.8 101 66.3
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-23 112.5 86 75.6
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-23 112.1 101 67.3
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-23 112.1 76 78.9
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-23 111.3 102 65.7
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-22 109.0 78 78.2
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-22 108.6 105 64.8
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-22 108.2 72 80.6
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-22 107.8 75 77.3
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-22 107.5 102 67.6
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-22 107.5 86 70.9
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-21 107.1 102 64.7
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-20 102.1 69 79.7
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-19 100.1 102 52.9
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-19 99.0 57 89.5
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-19 98.6 75 74.7
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-19 98.2 102 59.8
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 9.1e-19 97.4 102 51.0
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-18 97.1 69 75.4
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-18 97.1 76 71.1
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-18 94.4 102 59.8
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-17 93.6 94 61.7
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 8.5e-17 90.9 103 49.5
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-16 90.1 92 62.0
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-16 89.0 86 64.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-16 87.8 86 59.3
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-15 86.7 100 49.0
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-15 85.5 52 82.7
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 1.0e-14 84.0 101 47.5
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-14 84.0 77 67.5
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-14 83.6 92 56.5
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 3.9e-14 82.0 98 46.9
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-14 81.6 74 66.2
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 6.7e-14 81.3 82 58.5
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 2.0e-13 79.7 101 44.6
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-13 79.0 79 60.8
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 4.4e-13 78.6 99 46.5
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 5.7e-13 78.2 92 44.6
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.4e-13 77.8 96 50.0
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-12 76.3 45 84.4
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 3.7e-12 75.5 110 41.8
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 8.2e-12 74.3 75 53.3
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-12 74.3 83 60.2
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.1e-11 73.9 82 56.1
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 4.1e-11 72.0 99 43.4
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-11 72.0 101 50.5
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 5.9e-10 68.2 75 50.7
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-10 67.8 98 43.9
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 7.7e-10 67.8 98 43.9
Nitab4.5_0018043g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-09 67.4 58 69.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-09 67.0 101 41.6
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 86 51.2
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-09 65.9 94 44.7
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-09 65.5 101 40.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-09 65.1 79 50.6
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-09 64.7 98 42.9
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-09 64.3 94 48.9
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.5e-09 64.3 92 44.6
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.5e-09 64.3 101 40.6
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 63.9 50 76.0
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 44 77.3
Solyc05g043390.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 84 48.8
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-08 62.8 81 46.9
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-08 62.4 86 50.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-08 62.4 98 41.8
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-08 62.4 79 46.8
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.2e-08 62.0 75 46.7
CAN.G226.31 Capsicum annuum HOM05D003911 ORTHO05D002175 5.5e-08 61.6 50 62.0
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-08 61.6 83 47.0
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-08 61.2 93 43.0
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-08 61.2 98 40.8
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-08 61.2 101 39.6
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-08 60.8 75 46.7
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-08 60.8 88 44.3
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-07 60.5 94 41.5
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-07 60.5 73 46.6
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.2e-07 60.5 101 38.6
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-07 60.5 79 43.0
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.6e-07 60.1 101 38.6
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-07 60.1 79 43.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 99 38.4
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-07 59.7 98 39.8
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-07 59.7 62 53.2
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 2.7e-07 59.3 107 38.3
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-07 59.3 98 40.8
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 2.7e-07 59.3 101 37.6
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.7e-07 59.3 79 43.0
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-07 58.9 95 43.2
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-07 58.9 79 41.8
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.7e-07 58.5 64 51.6
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-07 58.5 98 38.8
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-07 58.5 99 39.4
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.7e-07 58.5 81 46.9
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.7e-07 58.5 79 43.0
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-06 57.4 61 50.8
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.0e-06 57.4 100 39.0
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 32 90.6
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 102 38.2
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 57.0 73 43.8
CAN.G148.6 Capsicum annuum HOM05D003911 ORTHO05D001773 1.8e-06 56.6 74 44.6
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-06 56.6 75 42.7
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 1.8e-06 56.6 88 42.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.8e-06 56.6 101 37.6
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 56.2 100 39.0
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-06 56.2 89 41.6
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-06 55.8 67 50.7
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-06 55.8 50 72.0
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 5.2e-06 55.1 50 56.0
CAN.G760.2 Capsicum annuum HOM05D000399 ORTHO05D018858 6.7e-06 54.7 62 51.6
Nitab4.5_0000378g0120 Nicotiana tabacum HOM05D000995 ORTHO05D010997 6.7e-06 54.7 34 73.5
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-06 54.3 96 38.5
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.8e-06 54.3 128 32.8


User provided reference genes

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