Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.0e-151 538.1 279 100.0
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 3.9e-122 441.8 285 81.8
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.4e-118 428.7 283 80.2
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 1.1e-116 423.7 282 79.8
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 2.2e-109 399.4 273 77.7
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.6e-102 375.9 284 71.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.2e-101 372.9 287 70.4
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.1e-99 366.3 283 70.0
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.5e-99 365.5 298 69.8
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.3e-97 359.0 279 68.8
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 3.3e-97 359.0 278 71.6
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 7.4e-97 357.8 291 67.7
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.6e-96 356.7 276 69.6
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.7e-96 355.5 290 67.2
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 3.7e-96 355.5 280 68.2
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.8e-96 355.1 310 66.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 6.2e-96 354.8 277 69.0
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.1e-95 354.0 292 66.4
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.4e-95 353.6 283 68.6
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.8e-95 353.2 276 70.3
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.1e-95 352.4 290 66.2
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 5.3e-95 351.7 285 68.4
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 5.3e-95 351.7 286 65.0
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 9.0e-95 350.9 281 67.6
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.2e-94 350.5 281 67.6
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.0e-94 349.7 300 64.7
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.6e-94 349.4 287 66.9
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.4e-94 349.0 295 65.1
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.3e-93 347.1 280 66.4
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.7e-93 346.7 276 66.7
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.2e-93 346.3 281 66.5
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.8e-93 345.5 291 66.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 4.9e-93 345.1 279 67.0
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 8.4e-93 344.4 282 66.3
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.4e-92 343.6 341 58.9
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.9e-92 343.2 282 67.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.9e-92 343.2 289 65.4
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.5e-92 342.8 293 64.5
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.2e-92 342.4 280 68.2
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 3.2e-92 342.4 288 63.9
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 5.5e-92 341.7 289 65.1
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 5.5e-92 341.7 281 66.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 7.1e-92 341.3 277 65.3
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 3.5e-91 339.0 291 63.2
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.6e-91 338.6 279 64.9
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 6.0e-91 338.2 282 65.6
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.9e-91 337.8 291 62.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 5.1e-90 335.1 296 66.2
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 1.5e-89 333.6 282 63.5
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.1e-88 329.7 279 65.2
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 4.8e-88 328.6 195 83.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 8.2e-88 327.8 283 64.7
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.4e-87 327.0 242 69.0
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.4e-87 327.0 277 65.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.8e-87 326.6 205 80.5
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 3.1e-87 325.9 315 57.5
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 6.9e-87 324.7 199 80.9
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 6.9e-87 324.7 280 63.9
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 9.0e-87 324.3 284 62.0
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 9.0e-87 324.3 275 63.6
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.5e-86 323.6 284 67.6
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.0e-85 320.9 195 80.5
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.2e-85 319.7 195 81.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.8e-85 318.9 291 64.9
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 8.5e-85 317.8 291 61.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.4e-84 317.0 273 61.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.5e-84 316.2 370 52.4
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 5.5e-84 315.1 273 63.7
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.2e-83 313.9 269 62.5
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.9e-81 306.6 278 60.4
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 4.3e-81 305.4 272 61.0
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 9.7e-81 304.3 202 72.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.3e-80 303.9 411 47.4
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.6e-80 303.5 279 59.9
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 8.2e-80 301.2 150 98.7
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.4e-79 299.7 306 57.5
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 3.1e-79 299.3 283 59.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 5.3e-79 298.5 286 59.1
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.0e-77 294.3 276 59.4
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 6.5e-77 291.6 319 52.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.4e-76 290.4 273 59.0
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.4e-76 290.4 279 60.6
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.2e-75 287.3 274 58.0
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.6e-75 287.0 198 73.7
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.7e-75 286.2 207 70.0
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.6e-75 285.8 213 68.1
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 7.9e-75 284.6 286 56.6
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.5e-73 280.4 277 56.7
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.6e-73 279.6 277 58.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 4.4e-73 278.9 299 53.2
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.7e-72 276.9 294 54.8
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.8e-71 273.5 191 71.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 2.0e-70 270.0 193 68.9
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.2e-68 262.3 247 63.2
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 5.2e-66 255.4 258 54.3
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.3e-65 252.7 240 59.2
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.0e-61 241.1 306 48.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.0e-57 226.9 176 71.6
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 4.5e-54 215.7 156 72.4
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.9e-53 213.0 189 63.0
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.2e-52 209.1 133 82.0
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.8e-50 203.8 131 76.3
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 4.5e-46 189.1 202 55.4
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.7e-45 187.2 239 45.2
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.4e-42 177.6 207 50.7
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.0e-42 176.4 114 74.6
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 3.0e-42 176.4 398 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.7e-32 144.1 149 51.7
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.8e-27 126.7 80 75.0
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 5.2e-26 122.5 284 37.0
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.0e-25 120.6 226 41.2
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 8.3e-24 115.2 75 73.3
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 9.2e-23 111.7 96 62.5
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.9e-15 87.4 111 49.5
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.7e-13 80.9 231 30.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-10 71.6 72 51.4
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.4e-07 59.3 61 54.1
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.1e-06 57.4 38 71.1
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.0e-06 55.8 63 50.8
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.0e-06 55.8 37 67.6


User provided reference genes

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