Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 2.2e-196 688.7 336 100.0
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 3.5e-170 601.7 337 88.7
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 7.6e-157 557.4 337 82.5
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 4.2e-155 551.6 330 82.7
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 6.7e-153 544.3 339 81.1
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 5.1e-145 518.1 288 86.8
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 1.6e-130 469.9 277 83.0
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 4.2e-107 392.1 277 69.7
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.6e-106 390.2 277 69.3
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 1.5e-104 383.6 277 67.1
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 6.3e-103 378.3 277 66.8
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 9.2e-102 374.4 277 64.6
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 7.8e-101 371.3 283 66.1
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 2.9e-100 369.4 277 63.9
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 4.7e-98 362.1 277 65.3
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 8.9e-97 357.8 276 63.4
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 1.5e-96 357.1 277 62.5
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 1.5e-96 357.1 234 70.9
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 3.4e-96 355.9 279 63.1
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.3e-95 354.0 277 61.4
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 1.7e-95 353.6 306 60.5
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 2.9e-95 352.8 280 61.8
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 2.9e-95 352.8 280 63.2
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 3.2e-94 349.4 277 62.8
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 4.1e-94 349.0 275 61.5
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 5.4e-94 348.6 375 50.7
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 7.0e-94 348.2 277 62.5
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 1.0e-92 344.4 282 61.3
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.7e-92 343.6 284 61.3
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 5.0e-92 342.0 276 58.3
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 6.6e-92 341.7 279 63.8
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 8.6e-92 341.3 278 60.8
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.1e-91 340.9 278 60.1
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 1.9e-91 340.1 282 60.6
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 4.3e-91 339.0 303 55.1
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 1.6e-90 337.0 278 61.2
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 2.1e-90 336.7 278 60.4
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.8e-90 336.3 273 59.3
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 3.6e-90 335.9 277 61.4
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 3.6e-90 335.9 279 58.4
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 8.0e-90 334.7 273 59.0
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 1.8e-89 333.6 287 55.7
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 2.3e-89 333.2 279 60.2
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 3.1e-89 332.8 284 60.6
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 3.1e-89 332.8 281 57.7
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.5e-88 330.5 280 58.2
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.5e-88 330.5 279 57.0
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 2.0e-88 330.1 291 56.7
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 2.0e-88 330.1 274 58.8
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.6e-88 329.7 282 56.7
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 4.4e-88 328.9 280 57.1
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 1.3e-87 327.4 279 59.1
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 4.9e-87 325.5 303 53.8
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 1.4e-86 323.9 276 58.3
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 1.4e-86 323.9 281 56.9
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.1e-86 322.4 277 58.5
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 5.4e-86 322.0 310 52.3
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 5.4e-86 322.0 275 59.3
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 7.0e-86 321.6 278 58.6
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.7e-85 319.7 276 55.8
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 2.7e-85 319.7 278 57.6
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 4.6e-85 318.9 278 57.9
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 4.6e-85 318.9 278 57.9
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 7.8e-85 318.2 278 58.3
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 7.8e-85 318.2 278 57.2
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.7e-84 317.0 278 57.9
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 3.9e-84 315.8 278 57.6
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 6.6e-84 315.1 278 57.9
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 8.6e-84 314.7 271 58.3
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 1.9e-83 313.5 278 56.8
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 1.6e-82 310.5 275 57.5
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.6e-82 310.5 204 65.2
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 1.6e-82 310.5 358 44.4
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 3.1e-81 306.2 268 58.6
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 3.1e-81 306.2 274 56.2
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 3.1e-81 306.2 269 53.5
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 8.9e-81 304.7 277 59.2
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 5.8e-80 302.0 288 52.1
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.3e-79 300.8 278 55.4
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 3.0e-76 289.7 499 37.3
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 3.9e-76 289.3 285 51.2
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 1.1e-73 281.2 253 59.3
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 1.7e-71 273.9 205 62.0
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 1.4e-70 270.8 243 54.7
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 7.1e-70 268.5 251 54.6
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 7.8e-69 265.0 157 74.5
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 2.5e-67 260.0 277 50.5
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.4e-65 253.4 319 48.3
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 3.1e-65 253.1 279 44.4
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 5.6e-51 205.7 209 43.5
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 7.4e-51 205.3 220 54.1
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 6.2e-50 202.2 217 53.5
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 1.2e-48 198.0 183 57.4
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 1.7e-47 194.1 182 47.8
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 9.3e-46 188.3 190 52.1
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 1.6e-45 187.6 261 37.5
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 2.7e-45 186.8 234 38.0
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 7.4e-43 178.7 110 70.9
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 1.1e-35 154.8 198 46.5
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 2.5e-35 153.7 109 63.3
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 4.6e-29 132.9 214 36.4
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 6.3e-26 122.5 95 56.8
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 8.2e-26 122.1 70 70.0
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 9.1e-25 118.6 177 40.1
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 3.2e-22 110.2 140 46.4
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 7.9e-21 105.5 86 55.8
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 2.4e-17 94.0 68 57.4
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 9.7e-11 72.0 46 58.7
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 4.8e-10 69.7 328 20.7
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 3.8e-07 60.1 284 22.9


User provided reference genes

Program Settings