Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000391g0130 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.6e-110 401.7 225 100.0
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.8e-54 215.3 144 82.6
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.2e-51 206.5 146 81.5
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.5e-42 175.3 433 35.3
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.3e-40 170.6 145 68.3
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.7e-39 165.2 145 68.3
Sopen05g007690 Solanum pennellii HOM05D003448 ORTHO05D004028 9.7e-31 137.9 142 59.2
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 2.2e-30 136.7 142 58.5
Peaxi162Scf00222g00119 Petunia axillaris HOM05D003448 ORTHO05D004028 8.2e-30 134.8 141 61.7
Sopen05g007670 Solanum pennellii HOM05D003448 ORTHO05D004028 6.9e-29 131.7 146 53.4
Solyc05g012850.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 2.0e-28 130.2 146 52.7
Sopen05g007660 Solanum pennellii HOM05D003448 ORTHO05D004028 1.0e-27 127.9 146 52.1
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.0e-27 127.9 145 54.5
Solyc05g012820.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.1e-26 124.4 140 51.4
PGSC0003DMG400028404 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.8e-24 117.1 141 55.3
Nitab4.5_0004471g0140 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.7e-23 112.1 72 76.4
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 1.0e-19 101.3 379 29.0
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 3.0e-16 89.7 154 41.6
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.3e-15 86.3 150 42.0
Nitab4.5_0000014g0220 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.3e-14 84.3 160 40.0
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 3.7e-14 82.8 138 42.8
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.8e-14 82.4 161 39.8
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.4e-13 80.9 150 40.7
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 2.4e-13 80.1 150 40.0
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 2.4e-13 80.1 162 38.9
Solyc04g005530.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 3.1e-13 79.7 162 38.9
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 1.2e-12 77.8 151 39.1
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 4.5e-12 75.9 132 40.2
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 5.9e-12 75.5 153 34.0
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 7.7e-12 75.1 130 41.5
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 7.7e-12 75.1 158 36.7
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 7.7e-12 75.1 147 39.5
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 1.3e-11 74.3 132 37.1
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 2.2e-11 73.6 143 42.0
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 2.2e-11 73.6 134 41.8
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 2.9e-11 73.2 142 34.5
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.9e-11 73.2 156 36.5
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 3.8e-11 72.8 152 38.8
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 5.0e-11 72.4 141 38.3
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 5.0e-11 72.4 156 36.5
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 5.0e-11 72.4 70 57.1
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 1.1e-10 71.2 149 34.9
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 1.1e-10 71.2 129 40.3
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 1.5e-10 70.9 142 35.9
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 1.9e-10 70.5 148 37.2
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 2.5e-10 70.1 152 36.8
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 2.5e-10 70.1 133 40.6
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 3.2e-10 69.7 163 38.0
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 5.5e-10 68.9 135 37.0
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 5.5e-10 68.9 140 40.0
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 9.4e-10 68.2 136 37.5
Solyc05g012810.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 9.4e-10 68.2 59 64.4
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.2e-09 67.8 146 38.4
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 1.2e-09 67.8 135 40.0
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 1.6e-09 67.4 139 41.7
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 1.6e-09 67.4 157 38.2
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 1.6e-09 67.4 147 36.7
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 2.1e-09 67.0 146 34.9
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 2.1e-09 67.0 147 34.7
MD16G1066700 Malus domestica HOM05D003448 ORTHO05D004028 2.7e-09 66.6 152 35.5
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 3.6e-09 66.2 145 37.9
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 4.7e-09 65.9 146 33.6
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 4.7e-09 65.9 144 37.5
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 4.7e-09 65.9 130 37.7
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 6.1e-09 65.5 147 37.4
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 6.1e-09 65.5 144 37.5
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 8.0e-09 65.1 145 37.2
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.0e-08 64.7 148 33.8
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 1.0e-08 64.7 138 37.0
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 1.4e-08 64.3 132 37.9
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 1.4e-08 64.3 145 34.5
Cc11_g07300 Coffea canephora HOM05D003448 ORTHO05D004028 1.8e-08 63.9 138 38.4
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 1.8e-08 63.9 135 37.8
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 1.8e-08 63.9 139 38.1
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 1.8e-08 63.9 137 33.6
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 2.3e-08 63.5 133 38.3
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 2.3e-08 63.5 134 35.1
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 3.0e-08 63.2 153 35.9
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 5.2e-08 62.4 154 36.4
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 5.2e-08 62.4 170 31.8
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 5.2e-08 62.4 141 38.3
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 5.2e-08 62.4 143 33.6
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 6.7e-08 62.0 140 37.9
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 8.8e-08 61.6 148 35.1
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 8.8e-08 61.6 145 34.5
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 8.8e-08 61.6 133 36.8
VMungo0251G3339 Vigna mungo HOM05D003448 ORTHO05D004028 8.8e-08 61.6 147 34.7
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 1.1e-07 61.2 139 35.3
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 1.1e-07 61.2 139 34.5
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 1.5e-07 60.8 132 36.4
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 4.4e-07 59.3 163 30.7
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 5.7e-07 58.9 151 33.8
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 7.5e-07 58.5 135 35.6
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 7.5e-07 58.5 153 35.9
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 9.7e-07 58.2 129 36.4
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 9.7e-07 58.2 133 35.3
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 1.3e-06 57.8 156 33.3
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 1.3e-06 57.8 150 36.0
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 1.3e-06 57.8 154 35.1
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 1.7e-06 57.4 149 32.2
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 2.2e-06 57.0 165 32.7
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 2.8e-06 56.6 146 32.9
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 2.8e-06 56.6 152 33.6
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 2.8e-06 56.6 130 38.5
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 3.7e-06 56.2 151 33.1
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 4.8e-06 55.8 138 38.4
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 4.8e-06 55.8 138 38.4
Lalb_Chr09g0329141 Lupinus albus HOM05D003448 ORTHO05D004028 6.3e-06 55.5 124 35.5
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 6.3e-06 55.5 135 34.8
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 8.2e-06 55.1 141 32.6
Lsat_1_v5_gn_8_49200 Lactuca sativa HOM05D003448 ORTHO05D004028 8.2e-06 55.1 134 37.3


User provided reference genes

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