Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 1.9e-150 535.8 275 100.0
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 2.7e-107 392.5 281 76.5
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 4.9e-101 371.7 267 76.4
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 6.6e-98 361.3 269 75.5
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 1.2e-94 350.5 318 63.8
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 4.1e-76 288.9 184 83.2
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 8.4e-69 264.6 279 54.1
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 2.4e-68 263.1 290 52.1
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 1.6e-67 260.4 295 51.9
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 2.1e-67 260.0 229 58.1
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 6.0e-67 258.5 275 54.2
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 7.8e-67 258.1 301 50.8
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 2.3e-66 256.5 243 57.6
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 1.5e-65 253.8 234 57.7
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 2.5e-65 253.1 194 66.0
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 4.3e-65 252.3 319 49.5
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 5.6e-65 251.9 279 50.9
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 1.6e-64 250.4 210 61.0
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 3.6e-64 249.2 264 52.3
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 4.8e-64 248.8 207 60.4
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 1.8e-63 246.9 289 50.2
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 4.0e-63 245.7 276 52.2
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 5.3e-63 245.4 256 52.7
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.6e-62 243.0 199 61.8
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 2.6e-62 243.0 226 58.0
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 3.4e-62 242.7 292 49.3
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 5.8e-62 241.9 211 59.2
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 7.6e-62 241.5 199 61.8
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 1.3e-61 240.7 243 53.5
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 1.3e-61 240.7 194 62.9
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 2.2e-61 240.0 285 50.5
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 2.9e-61 239.6 209 59.3
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 3.8e-61 239.2 194 62.4
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 6.4e-61 238.4 204 58.8
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 6.4e-61 238.4 246 54.1
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 1.4e-60 237.3 199 60.8
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.4e-60 237.3 199 60.8
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 1.9e-60 236.9 265 50.6
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 3.2e-60 236.1 299 46.5
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 4.2e-60 235.7 207 58.0
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 5.4e-60 235.3 268 50.7
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 5.4e-60 235.3 220 55.9
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 7.1e-60 235.0 274 51.5
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 7.1e-60 235.0 274 51.5
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 9.3e-60 234.6 199 60.8
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 9.3e-60 234.6 142 77.5
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 2.1e-59 233.4 193 59.1
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 2.1e-59 233.4 204 60.8
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 2.7e-59 233.0 213 56.3
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 3.5e-59 232.6 218 57.3
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 6.0e-59 231.9 279 52.3
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 6.0e-59 231.9 283 47.7
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 1.0e-58 231.1 290 47.2
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 2.3e-58 229.9 218 54.1
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 3.0e-58 229.6 213 55.9
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 5.1e-58 228.8 200 60.0
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 8.7e-58 228.0 292 47.6
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 1.5e-57 227.3 290 49.3
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 1.9e-57 226.9 243 51.9
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 2.5e-57 226.5 303 46.5
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.3e-57 226.1 263 51.7
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 5.6e-57 225.3 204 58.3
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 9.6e-57 224.6 263 49.0
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 2.8e-56 223.0 200 58.0
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 3.6e-56 222.6 270 49.6
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 6.2e-56 221.9 192 59.4
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.4e-55 220.7 199 58.8
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 1.4e-55 220.7 280 49.6
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.4e-55 220.7 202 55.4
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 1.4e-55 220.7 192 58.3
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 1.8e-55 220.3 195 57.4
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 3.1e-55 219.5 247 51.0
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 1.5e-54 217.2 343 42.6
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.5e-54 217.2 271 48.7
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 2.0e-54 216.9 201 57.2
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 4.5e-54 215.7 210 53.3
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 5.8e-54 215.3 288 45.8
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 7.6e-54 214.9 168 64.3
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 9.9e-54 214.5 197 56.3
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 1.7e-53 213.8 225 53.8
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 2.9e-53 213.0 197 55.8
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 2.9e-53 213.0 197 55.8
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 1.1e-52 211.1 287 46.7
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 1.9e-52 210.3 173 60.7
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 7.1e-52 208.4 200 55.0
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 1.6e-51 207.2 198 54.0
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 1.6e-51 207.2 198 54.0
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 6.0e-51 205.3 138 71.0
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 5.3e-47 192.2 420 36.4
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 2.6e-46 189.9 203 48.8
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 4.5e-46 189.1 97 95.9
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 7.6e-46 188.3 201 48.3
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 1.8e-42 177.2 178 52.8
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 3.7e-40 169.5 296 41.9
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.8e-39 167.2 196 48.0
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 1.0e-37 161.4 137 54.7
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 2.5e-36 156.8 165 50.3
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 1.2e-35 154.5 139 52.5
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 2.7e-35 153.3 139 50.4
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 2.5e-33 146.7 296 38.2
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 1.2e-27 127.9 260 38.8
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 8.8e-26 121.7 137 47.4
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.4e-23 113.6 186 41.4
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.7e-21 107.5 134 41.0
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 2.2e-21 107.1 142 41.5
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 1.4e-15 87.8 225 34.2
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 1.6e-14 84.3 101 45.5
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 1.1e-12 78.2 135 43.7
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 2.1e-11 73.9 134 36.6
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.0e-10 71.6 84 51.2
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 1.4e-10 71.2 123 37.4
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 4.0e-10 69.7 98 42.9
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 1.3e-08 64.7 66 50.0


User provided reference genes

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