Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.2e-211 739.6 378 100.0
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.7e-160 569.7 391 79.5
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.6e-123 446.8 382 66.2
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 6.0e-118 428.3 401 63.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 6.7e-117 424.9 400 63.0
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.4e-114 417.2 407 62.4
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.4e-81 306.2 267 62.9
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.4e-79 300.8 266 61.7
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.1e-78 297.0 349 50.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.1e-78 297.0 414 46.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.1e-76 291.2 396 47.5
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.3e-75 287.7 387 46.0
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.8e-75 285.8 264 58.0
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.4e-74 284.3 280 57.1
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.4e-74 283.5 335 51.0
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.3e-74 282.3 408 44.4
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.2e-73 281.2 380 47.6
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.6e-73 280.0 403 46.4
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.6e-73 280.0 385 46.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.5e-73 279.6 289 55.7
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.5e-73 279.3 259 59.8
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 5.9e-73 278.9 311 52.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.0e-72 278.1 269 57.6
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.8e-72 276.2 324 50.3
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 5.0e-72 275.8 306 51.0
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 6.5e-72 275.4 388 46.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.9e-71 273.9 390 46.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.5e-71 273.5 394 45.7
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 4.2e-71 272.7 402 45.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 9.4e-71 271.6 353 49.0
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.1e-70 270.4 388 46.1
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 3.6e-70 269.6 321 50.2
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 4.7e-70 269.2 304 50.3
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.0e-69 268.1 383 44.6
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.0e-69 266.5 291 53.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 3.0e-69 266.5 291 52.9
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 2.6e-68 263.5 302 48.7
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 3.3e-68 263.1 409 44.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.4e-68 262.7 301 53.2
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.4e-68 262.7 408 44.4
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 5.7e-68 262.3 263 55.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 5.7e-68 262.3 339 46.6
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 7.5e-68 261.9 324 45.7
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.5e-68 261.9 413 42.4
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 9.7e-68 261.5 331 46.2
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.3e-67 261.2 407 43.7
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.7e-67 260.8 305 49.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.7e-67 260.8 265 56.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.2e-67 260.4 320 50.3
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.2e-67 260.4 281 53.4
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.2e-67 260.4 350 47.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.8e-67 260.0 346 46.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.7e-67 259.6 301 52.5
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.7e-67 259.6 298 53.7
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.8e-67 259.2 302 52.6
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.2e-67 258.5 301 52.2
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.1e-66 258.1 316 47.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-66 258.1 258 57.0
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 9.1e-66 255.0 282 51.8
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 2.7e-65 253.4 288 51.7
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 3.5e-65 253.1 420 41.2
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 4.5e-65 252.7 315 47.6
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.7e-64 250.8 291 50.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.9e-64 250.0 265 55.1
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.1e-63 248.1 285 51.2
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.2e-63 246.5 334 46.4
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.4e-63 245.0 372 44.1
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-61 240.4 324 46.6
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.0e-61 240.0 271 53.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 4.0e-61 239.6 283 48.4
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 4.0e-61 239.6 265 52.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.2e-60 238.0 377 42.4
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.7e-59 234.2 259 50.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 3.7e-59 233.0 264 50.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.7e-59 233.0 259 50.2
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 4.8e-59 232.6 266 51.5
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.8e-59 232.6 256 51.2
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.1e-58 231.5 286 49.3
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.8e-58 230.7 261 52.9
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.4e-58 229.2 280 50.0
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.7e-57 226.9 227 56.4
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 5.9e-57 225.7 261 48.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 5.9e-57 225.7 273 49.1
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.0e-56 224.9 206 58.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.0e-56 224.9 206 58.3
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.8e-56 223.0 239 53.1
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 6.5e-56 222.2 236 55.1
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 5.5e-55 219.2 206 56.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.2e-54 218.0 208 58.2
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.1e-54 217.2 206 56.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.1e-54 217.2 206 56.3
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.0e-53 214.9 206 56.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.3e-53 213.8 206 55.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-52 211.1 218 54.1
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 3.4e-52 209.9 202 56.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.8e-51 206.8 186 61.3
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 8.3e-51 205.3 166 66.3
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.5e-49 199.5 275 41.1
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.3e-48 197.2 155 65.8
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.5e-47 194.5 188 55.9
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.5e-44 184.5 190 55.3
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-40 171.0 214 49.1
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.2e-38 164.9 217 48.8
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.6e-38 164.5 218 46.8
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.4e-35 152.5 193 47.7
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.7e-32 144.4 207 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 4.7e-30 136.3 242 34.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 5.2e-29 132.9 135 56.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-27 128.3 151 53.0
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.2e-26 122.1 140 53.6
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.2e-26 122.1 290 36.6
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.5e-23 114.0 154 44.8
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.5e-20 104.8 216 31.0
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 3.2e-18 97.1 59 79.7
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 5.6e-15 86.3 204 30.4
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 4.0e-13 80.1 55 74.5
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 2.2e-11 74.3 53 64.2
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.6e-09 66.6 131 35.1
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.0e-08 65.5 110 43.6
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.3e-07 60.1 98 45.9
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.8e-06 56.6 79 49.4
CDE06G0605 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 8.1e-06 55.8 57 52.6


User provided reference genes

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