Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000374g0110 Nicotiana tabacum HOM05D001492 ORTHO05D001400 3.1e-144 515.4 309 100.0
Nitab4.5_0003393g0010 Nicotiana tabacum HOM05D001492 ORTHO05D001400 7.6e-127 457.6 388 72.7
PGSC0003DMG400006705 Solanum tuberosum HOM05D001492 ORTHO05D001400 5.3e-96 355.1 425 62.6
Sopen07g003720 Solanum pennellii HOM05D001492 ORTHO05D001400 3.8e-94 349.0 425 61.2
Peaxi162Scf00088g00125 Petunia axillaris HOM05D001492 ORTHO05D001400 1.9e-93 346.7 385 59.5
Solyc07g007830.4 Solanum lycopersicum HOM05D001492 ORTHO05D001400 1.1e-82 310.8 425 58.1
CAN.G763.5 Capsicum annuum HOM05D001492 ORTHO05D001400 9.8e-50 201.4 205 70.7
Hma1.2p1_0497F.1_g166440 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 2.6e-26 123.6 416 30.0
Dinv41470 Davidia involucrata HOM05D001492 ORTHO05D001400 4.9e-25 119.4 444 30.2
Actinidia21946 Actinidia chinensis HOM05D001492 ORTHO05D001400 1.7e-22 110.9 442 29.4
Actinidia07322 Actinidia chinensis HOM05D001492 ORTHO05D001400 3.3e-21 106.7 428 30.1
Aqoxy7G03627 Aquilegia oxysepala HOM05D001492 ORTHO05D001400 8.9e-19 98.6 434 26.3
GSVIVG01015602001 Vitis vinifera HOM05D001492 ORTHO05D001400 3.4e-18 96.7 402 29.4
TAR636G0826 Trochodendron aralioides HOM05D001492 ORTHO05D001400 4.4e-18 96.3 430 27.0
Cc06_g08030 Coffea canephora HOM05D001492 ORTHO05D001400 2.9e-17 93.6 456 30.3
TAR383G0276 Trochodendron aralioides HOM05D000291 ORTHO05D001400 1.4e-16 91.3 424 28.5
Nn8g39566 Nelumbo nucifera HOM05D001492 ORTHO05D001400 3.2e-16 90.1 399 29.8
TAR625G0095 Trochodendron aralioides HOM05D001492 ORTHO05D001400 4.1e-16 89.7 426 26.8
Nn2g12127 Nelumbo nucifera HOM05D001492 ORTHO05D001400 7.8e-15 85.5 427 26.7
Glyma.11G046300 Glycine max HOM05D001492 ORTHO05D001400 5.1e-14 82.8 133 40.6
Sc18g0000300 Simmondsia chinensis HOM05D001492 ORTHO05D001400 1.1e-13 81.6 136 41.9
Lsat_1_v5_gn_5_93880 Lactuca sativa HOM05D001492 ORTHO05D001400 1.5e-13 81.3 348 29.0
Prupe.7G249100 Prunus persica HOM05D001492 ORTHO05D001400 1.5e-13 81.3 390 26.4
Manes.14G116228 Manihot esculenta HOM05D001492 ORTHO05D001400 1.6e-12 77.8 395 27.6
Potri.018G125400 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.6e-12 77.8 349 28.4
Potri.T125207 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.6e-12 77.8 349 28.4
MD15G1165700 Malus domestica HOM05D001492 ORTHO05D001400 2.1e-12 77.4 393 25.4
Ciclev10008615m.g Citrus clementina HOM05D001492 ORTHO05D001400 2.8e-12 77.0 394 26.4
Hund26550 Selenicereus undatus HOM05D001492 ORTHO05D001400 2.8e-12 77.0 470 26.0
CiPaw.02G001300 Carya illinoinensis HOM05D001492 ORTHO05D001400 3.6e-12 76.6 123 39.8
Gorai.010G060900 Gossypium raimondii HOM05D001492 ORTHO05D001400 2.4e-11 73.9 112 45.5
Lsat_1_v5_gn_9_120001 Lactuca sativa HOM05D001492 ORTHO05D001400 2.4e-11 73.9 130 43.8
Glyma.01G195400 Glycine max HOM05D001492 ORTHO05D001400 3.1e-11 73.6 128 36.7
TWI63G0959 Tripterygium wilfordii HOM05D001492 ORTHO05D001400 4.0e-11 73.2 116 44.8
Cfa002925 Carpinus fangiana HOM05D001492 ORTHO05D001400 5.2e-11 72.8 431 26.0
MD02G1023000 Malus domestica HOM05D001492 ORTHO05D001400 5.2e-11 72.8 143 39.9
Aa31LG8G12210 Aethionema arabicum HOM05D001492 ORTHO05D001400 1.2e-10 71.6 156 37.8
Oeu021447.1 Olea europaea HOM05D001492 ORTHO05D001400 1.5e-10 71.2 134 35.8
Sabra18G0106700 Salix brachista HOM05D001492 ORTHO05D001400 1.5e-10 71.2 345 29.3
Duzib168G0736 Durio zibethinus HOM05D001492 ORTHO05D001400 2.0e-10 70.9 410 25.9
Gohir.A06G053500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 2.0e-10 70.9 406 25.9
VMungo1215G0686 Vigna mungo HOM05D001492 ORTHO05D001400 2.0e-10 70.9 131 37.4
MBI14_g09865_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 7.6e-10 68.9 422 25.4
Atru.chr7.1954 Acer truncatum HOM05D001492 ORTHO05D001400 9.9e-10 68.6 371 25.6
Rhsim01G0061000 Rhododendron simsii HOM05D001492 ORTHO05D001400 1.7e-09 67.8 126 40.5
Cpa.g.sc46.49 Carica papaya HOM05D001492 ORTHO05D001400 2.9e-09 67.0 113 44.2
Peaxi162Scf00548g10014 Petunia axillaris HOM05D001492 ORTHO05D001400 3.8e-09 66.6 124 36.3
CANSAT11G1666 Cannabis sativa HOM05D001492 ORTHO05D001400 4.9e-09 66.2 361 24.4
HanXRQChr11g0323021 Helianthus annuus HOM05D001492 ORTHO05D001400 4.9e-09 66.2 114 39.5
Lj7A110T25 Lonicera japonica HOM05D001492 ORTHO05D001400 4.9e-09 66.2 124 33.1
CSS0041133 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 6.4e-09 65.9 135 37.0
Carub.0005s1615 Capsella rubella HOM05D001492 ORTHO05D001400 6.4e-09 65.9 138 35.5
CDE01G0606 Ceratophyllum demersum HOM05D001492 ORTHO05D001400 6.4e-09 65.9 127 35.4
BcaC09g49974 Brassica carinata HOM05D001492 ORTHO05D001400 1.1e-08 65.1 141 34.0
A01p24460 Brassica napus HOM05D001492 ORTHO05D001400 1.1e-08 65.1 131 34.4
C01p30490 Brassica napus HOM05D001492 ORTHO05D001400 1.1e-08 65.1 141 34.0
BolC1t02992H Brassica oleracea HOM05D001492 ORTHO05D001400 1.1e-08 65.1 141 34.0
BraA01t02360Z Brassica rapa HOM05D001492 ORTHO05D001400 1.1e-08 65.1 131 34.4
CSS0013283 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 1.1e-08 65.1 135 36.3
CiPaw.04G175700 Carya illinoinensis HOM05D001492 ORTHO05D001400 1.1e-08 65.1 155 33.5
Gohir.D06G052500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 1.1e-08 65.1 403 27.5
MBI12_g44616_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 1.1e-08 65.1 92 43.5
AUR62004025 Chenopodium quinoa HOM05D001492 ORTHO05D001400 1.4e-08 64.7 99 40.4
Migut.H00330 Erythranthe guttata HOM05D001492 ORTHO05D001400 1.4e-08 64.7 127 37.0
Hma1.2p1_1760F.1_g301250 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 1.9e-08 64.3 124 35.5
Hma1.2p1_2434F.1_g322090 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 1.9e-08 64.3 124 35.5
EL10Ac8g18731 Beta vulgaris HOM05D001492 ORTHO05D001400 3.2e-08 63.5 113 35.4
Haze_25495 Corylus avellana HOM05D001492 ORTHO05D001400 4.2e-08 63.2 455 23.7
HPP92_018769 Vanilla planifolia HOM05D001492 ORTHO05D001400 5.4e-08 62.8 154 32.5
AUR62007533 Chenopodium quinoa HOM05D001492 ORTHO05D001400 7.1e-08 62.4 119 36.1
DCAR_021462 Daucus carota HOM05D001492 ORTHO05D001400 7.1e-08 62.4 118 34.7
FAN28G1598 Fragaria x ananassa HOM05D001492 ORTHO05D001400 7.1e-08 62.4 68 50.0
Oeu011978.1 Olea europaea HOM05D001492 ORTHO05D001400 7.1e-08 62.4 196 32.7
ECA234G0625 Erigeron canadensis HOM05D001492 ORTHO05D001400 9.3e-08 62.0 131 39.7
Thhalv10022763m.g Eutrema salsugineum HOM05D001492 ORTHO05D001400 9.3e-08 62.0 112 41.1
arahy.Tifrunner.gnm1.ann1.TI9N5S Arachis hypogaea HOM05D001492 ORTHO05D001400 1.2e-07 61.6 89 41.6
arahy.Tifrunner.gnm1.ann1.LR6QSS Arachis hypogaea HOM05D001492 ORTHO05D001400 1.6e-07 61.2 114 37.7
Lj2g0025461 Lotus japonicus HOM05D001492 ORTHO05D001400 1.6e-07 61.2 103 35.9
Thecc.09G133500 Theobroma cacao HOM05D001492 ORTHO05D001400 1.6e-07 61.2 109 40.4
CiPaw.03G249000 Carya illinoinensis HOM05D001492 ORTHO05D001400 2.1e-07 60.8 110 36.4
Potri.006G065200 Populus trichocarpa HOM05D001492 ORTHO05D001400 2.1e-07 60.8 117 35.9
Sp3g26130 Schrenkiella parvula HOM05D001492 ORTHO05D001400 2.1e-07 60.8 93 43.0
BcaB05g23159 Brassica carinata HOM05D001492 ORTHO05D001400 2.7e-07 60.5 148 34.5
Haze_15261 Corylus avellana HOM05D001492 ORTHO05D001400 2.7e-07 60.5 138 37.0
Migut.J01209 Erythranthe guttata HOM05D001492 ORTHO05D001400 2.7e-07 60.5 129 39.5
Oeu032430.1 Olea europaea HOM05D001492 ORTHO05D001400 2.7e-07 60.5 163 32.5
DCAR_025819 Daucus carota HOM05D001492 ORTHO05D001400 3.5e-07 60.1 120 31.7
Sabra14G0006200 Salix brachista HOM05D001492 ORTHO05D001400 3.5e-07 60.1 144 33.3
Hund13960 Selenicereus undatus HOM05D001492 ORTHO05D001400 3.5e-07 60.1 84 45.2
EL10Ac6g15603 Beta vulgaris HOM05D001492 ORTHO05D001400 4.6e-07 59.7 109 37.6
FAN26G0558 Fragaria x ananassa HOM05D001492 ORTHO05D001400 4.6e-07 59.7 138 32.6
HPP92_019630 Vanilla planifolia HOM05D001492 ORTHO05D001400 4.6e-07 59.7 157 31.8
MD15G1299800 Malus domestica HOM05D001492 ORTHO05D001400 6.0e-07 59.3 137 35.0
Medtr5g015180 Medicago truncatula HOM05D001492 ORTHO05D001400 6.0e-07 59.3 88 39.8
PSO541G4541 Papaver somniferum HOM05D001492 ORTHO05D001400 6.0e-07 59.3 139 34.5
RcHm_v2.0_Chr2g0108531 Rosa chinensis HOM05D001492 ORTHO05D001400 6.0e-07 59.3 139 34.5
Actinidia16416 Actinidia chinensis HOM05D001492 ORTHO05D001400 7.8e-07 58.9 84 39.3
AL8G43620 Arabidopsis lyrata HOM05D001492 ORTHO05D001400 7.8e-07 58.9 123 33.3
FAN23G1722 Fragaria x ananassa HOM05D001492 ORTHO05D001400 7.8e-07 58.9 69 47.8
Oeu056952.1 Olea europaea HOM05D001492 ORTHO05D001400 7.8e-07 58.9 381 26.0
Aa31LG4G18270 Aethionema arabicum HOM05D001492 ORTHO05D001400 1.0e-06 58.5 116 37.1
CARHR158870 Cardamine hirsuta HOM05D001492 ORTHO05D001400 1.0e-06 58.5 124 36.3
Lalb_Chr16g0378961 Lupinus albus HOM05D001492 ORTHO05D001400 1.0e-06 58.5 95 41.1
vmacro18019 Vaccinium macrocarpon HOM05D001492 ORTHO05D001400 1.0e-06 58.5 121 37.2
AL5G29790 Arabidopsis lyrata HOM05D001492 ORTHO05D001400 1.3e-06 58.2 129 32.6
MSTRG.23659 Avicennia marina HOM05D001492 ORTHO05D001400 1.3e-06 58.2 166 32.5
FAN28G0781 Fragaria x ananassa HOM05D001492 ORTHO05D001400 1.3e-06 58.2 117 36.8
PSO675G7944 Papaver somniferum HOM05D001492 ORTHO05D001400 1.3e-06 58.2 138 33.3
Potri.007G006400 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.3e-06 58.2 114 34.2
Ah.02g125340 Amaranthus hybridus HOM05D001492 ORTHO05D001400 1.7e-06 57.8 120 35.8
AT5G65910 Arabidopsis thaliana HOM05D001492 ORTHO05D001400 1.7e-06 57.8 122 32.8
CARHR279910 Cardamine hirsuta HOM05D001492 ORTHO05D001400 1.7e-06 57.8 123 31.7
Ciclev10025443m.g Citrus clementina HOM05D001492 ORTHO05D001400 1.7e-06 57.8 147 30.6
FvH4_1g18060 Fragaria vesca HOM05D001492 ORTHO05D001400 1.7e-06 57.8 135 34.1
Lsat_1_v5_gn_4_160081 Lactuca sativa HOM05D001492 ORTHO05D001400 1.7e-06 57.8 83 43.4
Lalb_Chr05g0213801 Lupinus albus HOM05D001492 ORTHO05D001400 1.7e-06 57.8 136 32.4
BcaB02g09907 Brassica carinata HOM05D001492 ORTHO05D001400 2.3e-06 57.4 117 34.2
Manes.06G046451 Manihot esculenta HOM05D001492 ORTHO05D001400 2.3e-06 57.4 119 37.0
Rhsim08G0092200 Rhododendron simsii HOM05D001492 ORTHO05D001400 2.3e-06 57.4 123 35.0
GSVIVG01009312001 Vitis vinifera HOM05D001492 ORTHO05D001400 2.3e-06 57.4 153 30.7
CDE07G0831 Ceratophyllum demersum HOM05D001492 ORTHO05D001400 3.0e-06 57.0 145 31.7
Dinv23036 Davidia involucrata HOM05D001492 ORTHO05D001400 3.0e-06 57.0 134 33.6
FAN19G0631 Fragaria x ananassa HOM05D001492 ORTHO05D001400 3.0e-06 57.0 132 32.6
Gorai.007G225700 Gossypium raimondii HOM05D001492 ORTHO05D001400 3.0e-06 57.0 138 31.9
Lj4A164G31 Lonicera japonica HOM05D001492 ORTHO05D001400 3.0e-06 57.0 137 29.9
PGR004G1641 Punica granatum HOM05D001492 ORTHO05D001400 3.0e-06 57.0 162 32.1
Sabra07G0004800 Salix brachista HOM05D001492 ORTHO05D001400 3.0e-06 57.0 99 38.4
Cpa.g.sc129.78 Carica papaya HOM05D001492 ORTHO05D001400 3.9e-06 56.6 141 33.3
SGA_v2.0_scaffold15G07482 Striga asiatica HOM05D001492 ORTHO05D001400 3.9e-06 56.6 139 31.7
Gohir.D11G210400 Gossypium hirsutum HOM05D001492 ORTHO05D001400 5.1e-06 56.2 138 31.9
Hma1.2p1_0424F.1_g150560 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 5.1e-06 56.2 132 32.6
Prupe.6G217900 Prunus persica HOM05D001492 ORTHO05D001400 5.1e-06 56.2 137 34.3
AT3G49800 Arabidopsis thaliana HOM05D001492 ORTHO05D001400 6.6e-06 55.8 130 31.5
CDE04G1116 Ceratophyllum demersum HOM05D001492 ORTHO05D001400 6.6e-06 55.8 145 31.7
SalBow3G2554 Salvia bowleyana HOM05D001492 ORTHO05D001400 6.6e-06 55.8 127 34.6
Manes.12G116700 Manihot esculenta HOM05D001492 ORTHO05D001400 8.7e-06 55.5 98 37.8
QL02p090023 Quercus lobata HOM05D001492 ORTHO05D001400 8.7e-06 55.5 120 35.0
Sed0019402 Sechium edule HOM05D001492 ORTHO05D001400 8.7e-06 55.5 132 28.8
THA.LOC104827707 Tarenaya hassleriana HOM05D001492 ORTHO05D001400 8.7e-06 55.5 133 30.1


User provided reference genes

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