Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000368g0410 Nicotiana tabacum HOM05D008706 ORTHO05D010440 3.2e-203 711.4 341 100.0
Nitab4.5_0002715g0100 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.5e-128 463.4 355 71.0
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.3e-87 327.4 316 57.0
Sopen01g043690 Solanum pennellii HOM05D008706 ORTHO05D010440 1.7e-87 327.0 318 56.6
Sopen01g043720 Solanum pennellii HOM05D008706 ORTHO05D010440 1.7e-87 327.0 318 56.6
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.1e-78 297.7 342 53.8
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.3e-76 290.0 389 47.6
Nitab4.5_0008157g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 6.7e-76 288.5 317 53.0
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 2.6e-72 276.6 337 51.9
Peaxi162Scf00136g00622 Petunia axillaris HOM05D008706 ORTHO05D010440 3.2e-62 243.0 316 50.0
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.1e-61 240.4 314 47.5
Nitab4.5_0001201g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.7e-61 239.2 332 46.4
PGSC0003DMG400037185 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.0e-60 236.1 326 43.6
Peaxi162Scf00073g00111 Petunia axillaris HOM05D008706 ORTHO05D010440 4.4e-59 232.6 274 50.7
PGSC0003DMG400009874 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.8e-57 227.3 312 47.1
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.3e-57 225.7 320 45.6
PGSC0003DMG400037851 Solanum tuberosum HOM05D008706 ORTHO05D010440 9.1e-57 224.9 326 43.3
PGSC0003DMG400009945 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.4e-52 211.1 299 43.1
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.8e-52 210.7 316 43.7
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 3.0e-52 209.9 331 42.3
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 8.8e-52 208.4 341 40.8
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 3.4e-51 206.5 331 41.7
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 7.5e-51 205.3 331 41.4
Solyc12g044780.2 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.2e-50 203.8 331 41.7
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 8.3e-50 201.8 358 38.5
Solyc12g044790.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.8e-49 200.7 331 41.1
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 4.7e-45 186.0 231 48.5
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 1.0e-44 184.9 299 41.1
CAN.G546.5 Capsicum annuum HOM05D008706 ORTHO05D010440 8.8e-44 181.8 283 44.9
Peaxi162Scf01026g00232 Petunia axillaris HOM05D008706 ORTHO05D010440 1.5e-35 154.5 278 39.9
Peaxi162Scf01164g10021 Petunia axillaris HOM05D008706 ORTHO05D010440 9.2e-33 145.2 331 35.3
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 3.5e-32 143.3 333 31.8
CAN.G396.6 Capsicum annuum HOM05D008706 ORTHO05D010440 4.4e-27 126.3 195 41.0
Nitab4.5_0006875g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 3.2e-25 120.2 147 50.3
Peaxi162Scf00105g00614 Petunia axillaris HOM05D008706 ORTHO05D010440 9.2e-25 118.6 204 38.2
CAN.G1476.3 Capsicum annuum HOM05D008706 ORTHO05D010440 1.3e-23 114.8 310 31.3
Nitab4.5_0003349g0020 Nicotiana tabacum HOM05D008706 ORTHO05D010440 9.9e-19 98.6 121 54.5
Sopen12g023150 Solanum pennellii HOM05D008706 ORTHO05D010440 2.5e-14 84.0 116 40.5
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 3.3e-14 83.6 192 29.2
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 1.6e-13 81.3 200 31.5
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 1.6e-13 81.3 186 30.6
Nitab4.5_0002715g0110 Nicotiana tabacum HOM05D000488 ORTHO05D010440 2.1e-13 80.9 142 41.5
Duzib177G0763 Durio zibethinus HOM05D007779 ORTHO05D009863 4.7e-13 79.7 186 30.6
CsaV3_3G028310 Cucumis sativus L. HOM05D021455 ORTHO05D010440 4.0e-12 76.6 183 29.5
COL.COLO4_15414 Corchorus olitorius HOM05D007779 ORTHO05D009863 5.2e-12 76.3 186 29.6
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 2.0e-11 74.3 184 30.4
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 4.4e-11 73.2 183 30.6
Gorai.004G248800 Gossypium raimondii HOM05D007779 ORTHO05D009863 7.6e-11 72.4 189 30.2
BcaC06g32099 Brassica carinata HOM05D007779 ORTHO05D009863 1.3e-10 71.6 212 26.9
Gohir.D08G234100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 1.3e-10 71.6 189 30.2
ClCG00G005860 Citrullus lanatus HOM05D021455 ORTHO05D010440 3.8e-10 70.1 181 29.3
ClCG07G001350 Citrullus lanatus HOM05D021455 ORTHO05D010440 3.8e-10 70.1 181 29.3
Gohir.A08G217100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 3.8e-10 70.1 189 29.6
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 3.8e-10 70.1 183 29.0
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 4.9e-10 69.7 190 26.8
Peaxi162Scf00314g00026 Petunia axillaris HOM05D033978 ORTHO05D024718 4.9e-10 69.7 214 30.8
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 8.4e-10 68.9 183 33.9
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 8.4e-10 68.9 229 27.5
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 1.4e-09 68.2 189 27.5
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 1.9e-09 67.8 184 27.2
A10p32150 Brassica napus HOM05D007779 ORTHO05D009863 1.9e-09 67.8 212 26.9
BraA10t45258Z Brassica rapa HOM05D007779 ORTHO05D009863 1.9e-09 67.8 212 26.9
Potri.019G013900 Populus trichocarpa HOM05D007779 ORTHO05D009863 1.9e-09 67.8 184 27.7
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 2.4e-09 67.4 211 30.8
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 3.2e-09 67.0 228 26.3
BcaB05g21790 Brassica carinata HOM05D007779 ORTHO05D009863 5.4e-09 66.2 216 30.1
Thhalv10013722m.g Eutrema salsugineum HOM05D007779 ORTHO05D009863 5.4e-09 66.2 192 26.6
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 7.1e-09 65.9 142 33.8
AT5G03970 Arabidopsis thaliana HOM05D007779 ORTHO05D009863 7.1e-09 65.9 190 28.9
C09p72880 Brassica napus HOM05D007779 ORTHO05D009863 7.1e-09 65.9 212 25.9
BolC9t60024H Brassica oleracea HOM05D007779 ORTHO05D009863 7.1e-09 65.9 212 25.9
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 9.2e-09 65.5 248 29.0
C09p72900 Brassica napus HOM05D007779 ORTHO05D009863 1.6e-08 64.7 190 26.3
BolC9t60025H Brassica oleracea HOM05D007779 ORTHO05D009863 1.6e-08 64.7 190 26.3
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 1.6e-08 64.7 174 29.9
Sabra19G0026600 Salix brachista HOM05D007779 ORTHO05D009863 2.1e-08 64.3 184 26.6
Sabra19G0016500 Salix brachista HOM05D007779 ORTHO05D009863 3.5e-08 63.5 184 26.6
Aa31LG1G21350 Aethionema arabicum HOM05D007779 ORTHO05D009863 6.0e-08 62.8 216 28.7
PSO407G0006 Papaver somniferum HOM05D008326 ORTHO05D001155 6.0e-08 62.8 238 29.4
PGSC0003DMG400039069 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.3e-07 61.6 119 33.6
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 1.7e-07 61.2 207 31.4
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.7e-07 61.2 276 25.4
RcHm_v2.0_Chr6g0292091 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-07 61.2 165 29.7
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 2.3e-07 60.8 183 32.2
Aqoxy7G01704 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 3.0e-07 60.5 216 26.4
MD12G1244700 Malus domestica HOM05D007779 ORTHO05D009863 5.1e-07 59.7 184 25.5
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.5e-06 58.2 297 25.3
Aqoxy1G00049 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.9e-06 57.8 103 34.0
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 1.9e-06 57.8 246 26.4
AL6G13560 Arabidopsis lyrata HOM05D007779 ORTHO05D009863 3.3e-06 57.0 157 28.7
Duzib106G0954 Durio zibethinus HOM05D007779 ORTHO05D009863 3.3e-06 57.0 93 36.6
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 3.3e-06 57.0 251 22.7
Sopen11g027850 Solanum pennellii HOM05D008706 ORTHO05D010440 3.3e-06 57.0 123 34.1
Dinv04029 Davidia involucrata HOM05D001729 ORTHO05D001155 4.3e-06 56.6 229 26.6
C09p72920 Brassica napus HOM05D007779 ORTHO05D009863 5.6e-06 56.2 152 27.6
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 5.6e-06 56.2 291 25.8
HanXRQChr02g0054011 Helianthus annuus HOM05D002420 ORTHO05D002422 7.3e-06 55.8 223 28.7
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 7.3e-06 55.8 161 35.4


User provided reference genes

Program Settings