Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000368g0090 Nicotiana tabacum HOM05D006888 ORTHO05D008371 6.5e-122 442.2 324 100.0
PGSC0003DMG400002802 Solanum tuberosum HOM05D006888 ORTHO05D008371 1.8e-92 344.4 222 81.1
Solyc01g100450.1 Solanum lycopersicum HOM05D006888 ORTHO05D008371 1.2e-91 341.7 222 80.6
Sopen01g043970 Solanum pennellii HOM05D006888 ORTHO05D008371 4.5e-91 339.7 222 80.2
CAN.G1715.1 Capsicum annuum HOM05D006888 ORTHO05D008371 2.0e-86 324.3 221 76.5
Peaxi162Scf00673g00033 Petunia axillaris HOM05D006888 ORTHO05D008371 1.5e-78 298.1 203 73.9
Oeu064824.1 Olea europaea HOM05D006888 ORTHO05D008371 9.3e-52 209.1 193 57.0
SGA_v2.0_scaffold5G02782 Striga asiatica HOM05D006888 ORTHO05D008371 2.0e-46 191.4 214 50.5
CSS0014440 Camellia sinensis var. sinensis HOM05D006888 ORTHO05D008371 3.4e-46 190.7 202 53.0
CSS0050387 Camellia sinensis var. sinensis HOM05D006888 ORTHO05D008371 1.4e-44 185.3 186 55.4
TAR362G0873 Trochodendron aralioides HOM05D006888 ORTHO05D008371 4.2e-44 183.7 173 53.8
Gorai.007G306300 Gossypium raimondii HOM05D006888 ORTHO05D008371 5.4e-44 183.3 173 54.3
Gohir.D11G283400 Gossypium hirsutum HOM05D006888 ORTHO05D008371 7.1e-44 183.0 173 54.3
Prupe.7G165800 Prunus persica HOM05D006888 ORTHO05D008371 1.2e-43 182.2 173 52.6
Gohir.A11G273300 Gossypium hirsutum HOM05D006888 ORTHO05D008371 6.0e-43 179.9 173 54.3
Hma1.2p1_0472F.1_g160001 Hydrangea macrophylla HOM05D006888 ORTHO05D008371 7.9e-43 179.5 214 47.7
Migut.K00794 Erythranthe guttata HOM05D006888 ORTHO05D008371 1.3e-42 178.7 185 49.7
GSVIVG01031237001 Vitis vinifera HOM05D006888 ORTHO05D008371 2.3e-42 177.9 219 48.4
ClCG02G014950 Citrullus lanatus HOM05D006888 ORTHO05D008371 1.1e-41 175.6 192 51.6
Cfa006701 Carpinus fangiana HOM05D006888 ORTHO05D008371 1.9e-41 174.9 206 47.1
Lsat_1_v5_gn_7_74401 Lactuca sativa HOM05D006888 ORTHO05D008371 2.5e-41 174.5 212 47.6
SalBow3G0195 Salvia bowleyana HOM05D006888 ORTHO05D008371 2.5e-41 174.5 192 46.9
TWI56G0663 Tripterygium wilfordii HOM05D006888 ORTHO05D008371 2.5e-41 174.5 173 50.9
MELO3C004188.2 Cucumis melo HOM05D006888 ORTHO05D008371 5.6e-41 173.3 192 51.0
Duzib177G0618 Durio zibethinus HOM05D006888 ORTHO05D008371 5.6e-41 173.3 173 53.8
CsaV3_2G007050 Cucumis sativus L. HOM05D006888 ORTHO05D008371 7.4e-41 172.9 222 45.9
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 9.6e-41 172.6 206 46.6
Medtr4g108060 Medicago truncatula HOM05D006888 ORTHO05D008371 2.1e-40 171.4 173 53.8
Medtr4g074390 Medicago truncatula HOM05D006888 ORTHO05D008371 8.1e-40 169.5 173 53.2
Ciclev10003346m.g Citrus clementina HOM05D006888 ORTHO05D008371 1.8e-39 168.3 173 52.6
QL03p039859 Quercus lobata HOM05D006888 ORTHO05D008371 3.1e-39 167.5 206 47.1
Sc16g0009020 Simmondsia chinensis HOM05D006888 ORTHO05D008371 3.1e-39 167.5 192 47.4
TPR.G21561 Trifolium pratense HOM05D006888 ORTHO05D008371 3.1e-39 167.5 175 52.0
C05p07930 Brassica napus HOM05D006888 ORTHO05D008371 4.0e-39 167.2 173 49.7
MD02G1110600 Malus domestica HOM05D006888 ORTHO05D008371 5.3e-39 166.8 213 44.1
Phvul.002G058500 Phaseolus vulgaris HOM05D006888 ORTHO05D008371 5.3e-39 166.8 187 47.6
Potri.005G014500 Populus trichocarpa HOM05D006888 ORTHO05D008371 6.9e-39 166.4 173 47.4
QL03p013638 Quercus lobata HOM05D006888 ORTHO05D008371 6.9e-39 166.4 206 46.6
Aa31LG1G5110 Aethionema arabicum HOM05D006888 ORTHO05D008371 2.6e-38 164.5 192 44.8
Ca_03033_v3 Cicer arietinum L. HOM05D006888 ORTHO05D008371 2.6e-38 164.5 175 48.6
Glyma.11G103200 Glycine max HOM05D006888 ORTHO05D008371 2.6e-38 164.5 175 49.7
RcHm_v2.0_Chr2g0099761 Rosa chinensis HOM05D006888 ORTHO05D008371 3.4e-38 164.1 211 44.5
Psat5g196040 Pisum sativum HOM05D006888 ORTHO05D008371 4.5e-38 163.7 173 50.9
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 5.8e-38 163.3 181 50.3
Lalb_Chr01g0001501 Lupinus albus HOM05D006888 ORTHO05D008371 1.0e-37 162.5 183 47.5
BolC5t29545H Brassica oleracea HOM05D006888 ORTHO05D008371 1.3e-37 162.2 173 48.6
Lj3g0005449 Lotus japonicus HOM05D006888 ORTHO05D008371 1.3e-37 162.2 182 49.5
Psat5g190440 Pisum sativum HOM05D006888 ORTHO05D008371 1.3e-37 162.2 182 48.9
VMungo1215G1495 Vigna mungo HOM05D006888 ORTHO05D008371 1.3e-37 162.2 187 44.9
Nn1g08113 Nelumbo nucifera HOM05D006888 ORTHO05D008371 4.9e-37 160.2 221 43.4
EL10Ac4g09447 Beta vulgaris HOM05D006888 ORTHO05D008371 8.4e-37 159.5 224 39.7
Manes.03G083400 Manihot esculenta HOM05D006888 ORTHO05D008371 8.4e-37 159.5 171 48.5
Actinidia35523 Actinidia chinensis HOM05D006888 ORTHO05D008371 1.4e-36 158.7 222 44.1
Carub.0001s0920 Capsella rubella HOM05D006888 ORTHO05D008371 1.4e-36 158.7 175 47.4
AL1G20420 Arabidopsis lyrata HOM05D006888 ORTHO05D008371 2.5e-36 157.9 173 47.4
Thhalv10009487m.g Eutrema salsugineum HOM05D006888 ORTHO05D008371 2.5e-36 157.9 173 46.8
Sp1g08450 Schrenkiella parvula HOM05D006888 ORTHO05D008371 3.2e-36 157.5 173 49.1
arahy.Tifrunner.gnm1.ann1.8HC1KC Arachis hypogaea HOM05D006888 ORTHO05D008371 5.5e-36 156.8 173 49.1
CARHR009830 Cardamine hirsuta HOM05D006888 ORTHO05D008371 5.5e-36 156.8 173 48.6
FvH4_1g12100 Fragaria vesca HOM05D006888 ORTHO05D008371 7.1e-36 156.4 191 46.1
FAN19G1999 Fragaria x ananassa HOM05D006888 ORTHO05D008371 9.3e-36 156.0 191 46.1
AT1G09820 Arabidopsis thaliana HOM05D006888 ORTHO05D008371 1.2e-35 155.6 192 44.8
CiPaw.08G155700 Carya illinoinensis HOM05D006888 ORTHO05D008371 1.2e-35 155.6 192 44.8
arahy.Tifrunner.gnm1.ann1.8QK61L Arachis hypogaea HOM05D006888 ORTHO05D008371 2.7e-35 154.5 173 48.6
CANSAT54G0476 Cannabis sativa HOM05D006888 ORTHO05D008371 1.0e-34 152.5 177 47.5
A06p06540 Brassica napus HOM05D006888 ORTHO05D008371 1.3e-34 152.1 203 44.8
THA.LOC104820294 Tarenaya hassleriana HOM05D006888 ORTHO05D008371 2.3e-34 151.4 213 40.8
BraA06t23865Z Brassica rapa HOM05D006888 ORTHO05D008371 6.7e-34 149.8 203 44.8
RcHm_v2.0_Chr3g0457031 Rosa chinensis HOM05D006888 ORTHO05D008371 8.7e-34 149.4 184 45.1
HanXRQChr02g0059161 Helianthus annuus HOM05D006888 ORTHO05D008371 3.3e-33 147.5 181 46.4
FAN26G0552 Fragaria x ananassa HOM05D006888 ORTHO05D008371 4.3e-33 147.1 193 46.1
CDE05G0641 Ceratophyllum demersum HOM05D002225 ORTHO05D002271 9.6e-33 146.0 162 48.1
FAN23G2816 Fragaria x ananassa HOM05D006888 ORTHO05D008371 9.6e-33 146.0 211 42.2
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 1.6e-32 145.2 177 45.2
Psat5g195760 Pisum sativum HOM05D006888 ORTHO05D008371 2.8e-32 144.4 182 44.5
FAN19G0192 Fragaria x ananassa HOM05D006888 ORTHO05D008371 6.2e-32 143.3 211 42.2
FAN28G0085 Fragaria x ananassa HOM05D006888 ORTHO05D008371 6.2e-32 143.3 211 42.2
FvH4_6g07430 Fragaria vesca HOM05D006888 ORTHO05D008371 1.2e-30 139.0 181 40.3
Hma1.2p1_0052F.1_g030800 Hydrangea macrophylla HOM05D006888 ORTHO05D008371 1.2e-30 139.0 123 58.5
PGR083G0380 Punica granatum HOM05D006888 ORTHO05D008371 5.8e-30 136.7 132 53.0
FAN14G0975 Fragaria x ananassa HOM05D006888 ORTHO05D008371 7.6e-30 136.3 181 39.2
Psat5g177360 Pisum sativum HOM05D006888 ORTHO05D008371 2.9e-29 134.4 175 45.1
BcaC05g24842 Brassica carinata HOM05D006888 ORTHO05D008371 8.4e-29 132.9 173 42.8
Aqoxy3G04232 Aquilegia oxysepala HOM05D006888 ORTHO05D008371 1.4e-28 132.1 187 42.8
Atru.BG.136.p Acer truncatum HOM05D006888 ORTHO05D008371 1.3e-26 125.6 113 57.5
Psat5g190520 Pisum sativum HOM05D006888 ORTHO05D008371 1.3e-26 125.6 182 42.3
EL10Ac4g09424 Beta vulgaris HOM05D006888 ORTHO05D008371 1.6e-24 118.6 153 41.8
Nitab4.5_0004873g0030 Nicotiana tabacum HOM05D006888 ORTHO05D008371 3.1e-23 114.4 60 95.0
Psat7g173680 Pisum sativum HOM05D006888 ORTHO05D008371 1.2e-22 112.5 150 44.7
SHI18058 Sapria himalayana HOM05D006888 ORTHO05D008371 2.0e-22 111.7 175 38.9
Thhalv10000737m.g Eutrema salsugineum HOM05D006888 ORTHO05D008371 3.8e-21 107.5 99 51.5
Lj5A334T57 Lonicera japonica HOM05D006888 ORTHO05D008371 6.5e-21 106.7 210 33.8
ClCG00G002450 Citrullus lanatus HOM05D006888 ORTHO05D008371 1.1e-20 105.9 191 39.3
Ah.06g195940 Amaranthus hybridus HOM05D006888 ORTHO05D008371 7.2e-20 103.2 108 50.9
vmacro01561 Vaccinium macrocarpon HOM05D006888 ORTHO05D008371 7.2e-20 103.2 82 64.6
AUR62000398 Chenopodium quinoa HOM05D006888 ORTHO05D008371 3.0e-18 97.8 127 44.9
AUR62006754 Chenopodium quinoa HOM05D006888 ORTHO05D008371 4.3e-17 94.0 127 43.3
SEGI_04891 Sequoiadendron giganteum HOM05D006888 ORTHO05D008371 6.3e-16 90.1 204 27.9
DCAR_005421 Daucus carota HOM05D006888 ORTHO05D008371 5.3e-15 87.0 60 70.0
Hma1.2p1_0472F.1_g160010 Hydrangea macrophylla HOM05D006888 ORTHO05D008371 1.2e-14 85.9 60 66.7
Hma1.2p1_0472F.1_g160023 Hydrangea macrophylla HOM05D006888 ORTHO05D008371 1.2e-14 85.9 60 66.7
Sabra05G0011500 Salix brachista HOM05D006888 ORTHO05D008371 9.4e-12 76.3 61 62.3
Thecc.05G322900 Theobroma cacao HOM05D006888 ORTHO05D008371 1.2e-11 75.9 60 63.3
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 6.1e-11 73.6 86 43.0
Cc02_g35010 Coffea canephora HOM05D006888 ORTHO05D008371 1.4e-10 72.4 60 55.0
FAN09G2872 Fragaria x ananassa HOM05D006888 ORTHO05D008371 3.0e-10 71.2 169 29.0
Eucgr.A00652 Eucalyptus grandis HOM05D006888 ORTHO05D008371 5.1e-10 70.5 59 57.6
FAN02G2736 Fragaria x ananassa HOM05D006888 ORTHO05D008371 5.1e-10 70.5 181 29.3
Dinv24442 Davidia involucrata HOM05D006888 ORTHO05D008371 4.4e-09 67.4 70 51.4
HPP92_008224 Vanilla planifolia HOM05D006888 ORTHO05D008371 5.7e-09 67.0 177 29.9
Lalb_Chr05g0225641 Lupinus albus HOM05D006888 ORTHO05D008371 2.2e-08 65.1 139 31.7
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 1.4e-07 62.4 194 25.3
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 1.2e-06 59.3 239 24.7
Rhsim01G0212700 Rhododendron simsii HOM05D006931 ORTHO05D008782 1.2e-06 59.3 163 26.4
Thecc.05G322800 Theobroma cacao HOM05D006888 ORTHO05D008371 1.2e-06 59.3 78 38.5
Rhsim06G0175400 Rhododendron simsii HOM05D006931 ORTHO05D008782 3.5e-06 57.8 164 26.8
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.9e-06 57.0 197 23.4
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.9e-06 57.0 197 23.4


User provided reference genes

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