Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000367g0070 Nicotiana tabacum HOM05D002231 ORTHO05D005593 1.5e-65 252.7 127 100.0
Nitab4.5_0000367g0090 Nicotiana tabacum HOM05D002231 ORTHO05D005593 2.1e-30 136.0 68 94.1
Nitab4.5_0001205g0070 Nicotiana tabacum HOM05D002231 ORTHO05D005593 1.0e-29 133.7 68 91.2
Solyc05g015480.3 Solanum lycopersicum HOM05D002231 ORTHO05D005593 3.0e-29 132.1 68 89.7
CAN.G160.31 Capsicum annuum HOM05D002231 ORTHO05D005593 6.7e-29 131.0 68 88.2
Sopen05g010810 Solanum pennellii HOM05D002231 ORTHO05D005593 1.9e-28 129.4 68 88.2
Peaxi162Scf00518g00423 Petunia axillaris HOM05D002231 ORTHO05D005593 1.8e-26 122.9 68 83.8
Oeu049137.1 Olea europaea HOM05D002231 ORTHO05D005593 7.6e-25 117.5 68 80.9
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 2.2e-24 115.9 65 83.1
CSS0014688 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D005593 1.9e-23 112.8 68 75.0
CSS0045916 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D005593 1.9e-23 112.8 68 75.0
TAR371G0615 Trochodendron aralioides HOM05D002231 ORTHO05D005593 2.5e-23 112.5 68 75.0
DCAR_026461 Daucus carota HOM05D002231 ORTHO05D005593 3.2e-23 112.1 68 77.9
TAR629G0514 Trochodendron aralioides HOM05D002231 ORTHO05D005593 4.2e-23 111.7 68 75.0
Actinidia25569 Actinidia chinensis HOM05D002231 ORTHO05D005593 5.5e-23 111.3 68 75.0
MELO3C002365.2 Cucumis melo HOM05D002231 ORTHO05D005593 5.5e-23 111.3 68 75.0
CsaV3_1G009700 Cucumis sativus L. HOM05D002231 ORTHO05D005593 5.5e-23 111.3 68 75.0
Sed0027384 Sechium edule HOM05D002231 ORTHO05D005593 5.5e-23 111.3 68 75.0
ClCG03G003810 Citrullus lanatus HOM05D002231 ORTHO05D005593 1.6e-22 109.8 68 75.0
Oeu029196.1 Olea europaea HOM05D002231 ORTHO05D005593 1.6e-22 109.8 68 76.5
GSVIVG01008549001 Vitis vinifera HOM05D002231 ORTHO05D005593 1.6e-22 109.8 68 76.5
Hma1.2p1_0065F.1_g035430 Hydrangea macrophylla HOM05D002231 ORTHO05D005593 2.1e-22 109.4 68 73.5
HanXRQChr12g0372631 Helianthus annuus HOM05D002231 ORTHO05D005593 2.7e-22 109.0 68 77.9
Aqoxy5G03357 Aquilegia oxysepala HOM05D002231 ORTHO05D005593 3.5e-22 108.6 68 70.6
Atru.chr6.1798 Acer truncatum HOM05D002231 ORTHO05D005593 4.6e-22 108.2 68 72.1
Ciclev10033613m.g Citrus clementina HOM05D002231 ORTHO05D005593 6.0e-22 107.8 68 72.1
MBI07_g21932_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D005593 6.0e-22 107.8 68 75.0
Actinidia08068 Actinidia chinensis HOM05D002231 ORTHO05D005593 7.9e-22 107.5 68 72.1
Migut.I00534 Erythranthe guttata HOM05D002231 ORTHO05D005593 7.9e-22 107.5 68 69.1
Cc11_g16950 Coffea canephora HOM05D002231 ORTHO05D005593 1.0e-21 107.1 65 76.9
ECA233G4818 Erigeron canadensis HOM05D002231 ORTHO05D005593 1.0e-21 107.1 68 75.0
Eucgr.K02721 Eucalyptus grandis HOM05D002231 ORTHO05D005593 1.0e-21 107.1 68 70.6
Lj5C96T1 Lonicera japonica HOM05D002231 ORTHO05D005593 1.0e-21 107.1 68 75.0
Oeu029194.1 Olea europaea HOM05D002231 ORTHO05D005593 1.0e-21 107.1 68 75.0
Dinv23152 Davidia involucrata HOM05D002231 ORTHO05D005593 1.3e-21 106.7 68 73.5
Rhsim12G0175200 Rhododendron simsii HOM05D002231 ORTHO05D005593 1.3e-21 106.7 68 72.1
Duzib205G0910 Durio zibethinus HOM05D002231 ORTHO05D005593 1.8e-21 106.3 68 72.1
HanXRQChr09g0273271 Helianthus annuus HOM05D002231 ORTHO05D005593 2.3e-21 105.9 68 70.6
COL.COLO4_28134 Corchorus olitorius HOM05D002231 ORTHO05D005593 3.0e-21 105.5 68 72.1
Oeu061148.3 Olea europaea HOM05D002231 ORTHO05D005593 3.0e-21 105.5 68 69.1
vmacro19197 Vaccinium macrocarpon HOM05D002231 ORTHO05D005593 3.0e-21 105.5 68 70.6
vmacro23015 Vaccinium macrocarpon HOM05D002231 ORTHO05D005593 3.0e-21 105.5 68 70.6
Lj3P1069T29 Lonicera japonica HOM05D002231 ORTHO05D005593 3.9e-21 105.1 68 75.0
CSS0006670 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D005593 5.1e-21 104.8 68 69.1
PGR102G2809 Punica granatum HOM05D002231 ORTHO05D005593 5.1e-21 104.8 65 76.9
vmacro16721 Vaccinium macrocarpon HOM05D002231 ORTHO05D005593 5.1e-21 104.8 68 69.1
CSS0049925 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D005593 6.7e-21 104.4 68 70.6
Gohir.A12G189800 Gossypium hirsutum HOM05D002231 ORTHO05D005593 6.7e-21 104.4 68 70.6
RcHm_v2.0_Chr4g0430181 Rosa chinensis HOM05D002231 ORTHO05D005593 6.7e-21 104.4 68 70.6
Potri.012G098200 Populus trichocarpa HOM05D002231 ORTHO05D005593 1.1e-20 103.6 68 69.1
PGR044G2072 Punica granatum HOM05D002231 ORTHO05D005593 1.1e-20 103.6 68 72.1
Cpa.g.sc13.110 Carica papaya HOM05D002231 ORTHO05D005593 1.5e-20 103.2 68 67.6
Cfa018791 Carpinus fangiana HOM05D002231 ORTHO05D005593 1.5e-20 103.2 66 72.7
Manes.12G010800 Manihot esculenta HOM05D002231 ORTHO05D005593 1.5e-20 103.2 68 69.1
ATR0561G262 Amborella trichopoda HOM05D002231 ORTHO05D005593 1.9e-20 102.8 68 73.5
CiPaw.11G006600 Carya illinoinensis HOM05D002231 ORTHO05D005593 1.9e-20 102.8 68 73.5
DCAR_026216 Daucus carota HOM05D002231 ORTHO05D005593 1.9e-20 102.8 68 70.6
Duzib084G0454 Durio zibethinus HOM05D002231 ORTHO05D005593 1.9e-20 102.8 68 70.6
Zm00001eb169510 Zea mays HOM05D002231 ORTHO05D005593 1.9e-20 102.8 61 78.7
Haze_07143 Corylus avellana HOM05D002231 ORTHO05D005593 2.5e-20 102.4 66 71.2
Hma1.2p1_0014F.1_g009370 Hydrangea macrophylla HOM05D002231 ORTHO05D005593 2.5e-20 102.4 68 72.1
PSO017G6560 Papaver somniferum HOM05D002231 ORTHO05D005593 2.5e-20 102.4 68 66.2
Thecc.03G129800 Theobroma cacao HOM05D002231 ORTHO05D005593 2.5e-20 102.4 68 70.6
Oeu005002.1 Olea europaea HOM05D002231 ORTHO05D005593 3.3e-20 102.1 68 66.2
SalBow5G2363 Salvia bowleyana HOM05D002231 ORTHO05D005593 3.3e-20 102.1 68 66.2
GSVIVG01010490001 Vitis vinifera HOM05D002231 ORTHO05D005593 3.3e-20 102.1 68 70.6
Manes.06G120000 Manihot esculenta HOM05D002231 ORTHO05D005593 4.3e-20 101.7 68 69.1
Potri.003G172100 Populus trichocarpa HOM05D002231 ORTHO05D005593 4.3e-20 101.7 68 70.6
MD16G1119900 Malus domestica HOM05D002231 ORTHO05D005593 5.7e-20 101.3 68 67.6
ECA232G3460 Erigeron canadensis HOM05D002231 ORTHO05D005593 7.4e-20 100.9 68 67.6
MD06G1028900 Malus domestica HOM05D002231 ORTHO05D005593 7.4e-20 100.9 68 69.1
FvH4_4g23710 Fragaria vesca HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
FAN07G2577 Fragaria x ananassa HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
FAN12G2842 Fragaria x ananassa HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
Gohir.D12G192200 Gossypium hirsutum HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
Gorai.008G206500 Gossypium raimondii HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 66.2
Sabra15G0117700 Salix brachista HOM05D002231 ORTHO05D005593 9.7e-20 100.5 68 67.6
Prupe.1G225300 Prunus persica HOM05D002231 ORTHO05D005593 1.3e-19 100.1 68 66.2
Nitab4.5_0004080g0020 Nicotiana tabacum HOM05D002231 ORTHO05D005593 1.6e-19 99.8 68 75.0
Potri.015G097000 Populus trichocarpa HOM05D002231 ORTHO05D005593 1.6e-19 99.8 68 66.2
HPP92_023388 Vanilla planifolia HOM05D002231 ORTHO05D005593 1.6e-19 99.8 65 72.3
Lsat_1_v5_gn_4_80841 Lactuca sativa HOM05D002231 ORTHO05D005593 2.2e-19 99.4 64 71.9
Manes.13G011600 Manihot esculenta HOM05D002231 ORTHO05D005593 2.2e-19 99.4 68 69.1
QL03p052593 Quercus lobata HOM05D002231 ORTHO05D005593 2.8e-19 99.0 65 69.2
FAN22G0599 Fragaria x ananassa HOM05D002231 ORTHO05D005593 3.7e-19 98.6 68 64.7
MD13G1119700 Malus domestica HOM05D002231 ORTHO05D005593 3.7e-19 98.6 68 66.2
CANSAT80G2200 Cannabis sativa HOM05D002231 ORTHO05D005593 6.3e-19 97.8 69 68.1
CANSAT01G2545 Cannabis sativa HOM05D002231 ORTHO05D005593 8.2e-19 97.4 68 67.6
TWI14G0859 Tripterygium wilfordii HOM05D002231 ORTHO05D005593 8.2e-19 97.4 68 63.2
COL.COLO4_20408 Corchorus olitorius HOM05D002231 ORTHO05D005593 1.1e-18 97.1 68 67.6
Gohir.A03G125900 Gossypium hirsutum HOM05D002231 ORTHO05D005593 1.1e-18 97.1 64 73.4
Gohir.D02G148900 Gossypium hirsutum HOM05D002231 ORTHO05D005593 1.1e-18 97.1 64 73.4
Gorai.005G166900 Gossypium raimondii HOM05D002231 ORTHO05D005593 1.1e-18 97.1 64 73.4
Thecc.02G207600 Theobroma cacao HOM05D002231 ORTHO05D005593 1.1e-18 97.1 108 50.9
Os11g0487100 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D005593 1.4e-18 96.7 53 81.1
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.8e-18 96.3 68 67.6
FvH4_5g21420 Fragaria vesca HOM05D002231 ORTHO05D005593 4.1e-18 95.1 65 67.7
FAN13G1342 Fragaria x ananassa HOM05D002231 ORTHO05D005593 4.1e-18 95.1 65 67.7
FAN18G0826 Fragaria x ananassa HOM05D002231 ORTHO05D005593 4.1e-18 95.1 65 67.7
Potri.001G056400 Populus trichocarpa HOM05D002231 ORTHO05D005593 4.1e-18 95.1 68 66.2
HPP92_009720 Vanilla planifolia HOM05D002231 ORTHO05D005593 4.1e-18 95.1 69 63.8
Migut.D00277 Erythranthe guttata HOM05D002231 ORTHO05D005593 5.3e-18 94.7 59 76.3
FAN04G1694 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.3e-18 94.7 65 67.7
FAN08G3576 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.3e-18 94.7 65 67.7
RcHm_v2.0_Chr7g0208851 Rosa chinensis HOM05D002231 ORTHO05D005593 6.9e-18 94.4 64 67.2
Aqoxy5G03358 Aquilegia oxysepala HOM05D002231 ORTHO05D005593 9.0e-18 94.0 64 65.6
Lj4g0001184 Lotus japonicus HOM05D002231 ORTHO05D005593 9.0e-18 94.0 64 73.4
Ciclev10031960m.g Citrus clementina HOM05D002231 ORTHO05D005593 4.5e-17 91.7 68 63.2
Prupe.5G042900 Prunus persica HOM05D002231 ORTHO05D005593 4.5e-17 91.7 60 71.7
arahy.Tifrunner.gnm1.ann1.185HYR Arachis hypogaea HOM05D002231 ORTHO05D005593 5.9e-17 91.3 64 71.9
arahy.Tifrunner.gnm1.ann1.6KU1RV Arachis hypogaea HOM05D002231 ORTHO05D005593 5.9e-17 91.3 64 71.9
Glyma.05G048700 Glycine max HOM05D002231 ORTHO05D005593 5.9e-17 91.3 64 73.4
Dinv10953 Davidia involucrata HOM05D002231 ORTHO05D005593 1.3e-16 90.1 58 72.4
TWI18G0460 Tripterygium wilfordii HOM05D002231 ORTHO05D005593 1.3e-16 90.1 68 61.8
Lalb_Chr07g0183481 Lupinus albus HOM05D002231 ORTHO05D005593 1.7e-16 89.7 65 70.8
Medtr3g099200 Medicago truncatula HOM05D002231 ORTHO05D005593 2.9e-16 89.0 59 71.2
Atru.chr11.2329 Acer truncatum HOM05D002231 ORTHO05D005593 3.8e-16 88.6 68 60.3
TPR.G19237 Trifolium pratense HOM05D002231 ORTHO05D005593 3.8e-16 88.6 65 70.8
Psat5g051440 Pisum sativum HOM05D002231 ORTHO05D005593 5.0e-16 88.2 59 71.2
TPR.G14214 Trifolium pratense HOM05D002231 ORTHO05D005593 5.0e-16 88.2 59 71.2
VMungo1215G1447 Vigna mungo HOM05D002231 ORTHO05D005593 5.0e-16 88.2 64 71.9
Eucgr.B03497 Eucalyptus grandis HOM05D002231 ORTHO05D005593 8.5e-16 87.4 64 62.5
Ca_26103_v3 Cicer arietinum L. HOM05D002231 ORTHO05D005593 1.1e-15 87.0 65 70.8
Medtr4g102890 Medicago truncatula HOM05D002231 ORTHO05D005593 1.4e-15 86.7 65 69.2
Glyma.04G196000 Glycine max HOM05D002231 ORTHO05D005593 1.9e-15 86.3 58 70.7
Glyma.06G169800 Glycine max HOM05D002231 ORTHO05D005593 1.9e-15 86.3 58 70.7
Phvul.009G166200 Phaseolus vulgaris HOM05D002231 ORTHO05D005593 1.9e-15 86.3 58 70.7
VMungo1309G2479 Vigna mungo HOM05D002231 ORTHO05D005593 1.9e-15 86.3 58 70.7
Ca_16048_v3 Cicer arietinum L. HOM05D002231 ORTHO05D005593 2.5e-15 85.9 59 67.8
Psat4g066760 Pisum sativum HOM05D002231 ORTHO05D005593 2.5e-15 85.9 65 67.7
Lj1g0004967 Lotus japonicus HOM05D002231 ORTHO05D005593 3.2e-15 85.5 59 67.8
CiPaw.05G109200 Carya illinoinensis HOM05D002231 ORTHO05D005593 1.6e-14 83.2 68 58.8
Sed0004434 Sechium edule HOM05D002231 ORTHO05D005593 3.6e-14 82.0 49 73.5
Medtr4g104060 Medicago truncatula HOM05D002231 ORTHO05D005593 6.1e-14 81.3 61 70.5
SMO137G0388 Selaginella moellendorffii HOM05D002231 ORTHO05D005593 6.1e-14 81.3 62 67.7
QL10p002857 Quercus lobata HOM05D002231 ORTHO05D005593 3.3e-12 75.5 47 70.2
AagrBONN_evm.TU.Sc2ySwM_368.1934 Anthoceros agrestis HOM05D002231 ORTHO05D005593 4.8e-11 71.6 57 57.9
Cfa010010 Carpinus fangiana HOM05D001873 ORTHO05D001976 2.2e-08 62.8 58 53.4
Nitab4.5_0005014g0050 Nicotiana tabacum HOM05D002231 ORTHO05D005593 1.4e-07 60.1 31 90.3


User provided reference genes

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