Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 4.5e-94 347.8 165 100.0
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.5e-93 344.0 165 98.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.3e-85 319.7 161 91.3
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.2e-85 318.9 161 91.3
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.8e-85 318.2 161 91.3
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.8e-85 318.2 161 90.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.4e-79 299.7 161 84.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.4e-79 298.9 161 85.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.7e-78 293.9 158 84.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 7.7e-78 293.9 161 82.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.2e-77 292.4 159 81.8
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.9e-77 292.0 162 84.6
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 2.9e-77 292.0 163 79.1
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 8.5e-77 290.4 159 82.4
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.1e-76 290.0 158 82.9
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.1e-76 290.0 162 82.1
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.1e-76 290.0 161 80.1
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 82.3
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 4.2e-76 288.1 158 82.3
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 9.4e-76 287.0 161 80.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 157 81.5
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 2.1e-75 285.8 161 80.7
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.7e-75 285.4 156 82.7
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 2.7e-75 285.4 156 82.7
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 158 80.4
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.6e-75 285.0 160 79.4
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 3.6e-75 285.0 158 79.7
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.7e-75 284.6 158 81.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 6.1e-75 284.3 158 78.5
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.1e-75 284.3 149 87.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 6.1e-75 284.3 159 79.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.0e-75 283.9 158 81.6
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 8.0e-75 283.9 156 83.3
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.0e-74 283.5 156 82.1
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.4e-74 283.1 163 76.7
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.4e-74 283.1 158 77.8
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.8e-74 282.7 161 77.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.8e-74 282.7 158 80.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.8e-74 282.7 161 80.1
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 77.6
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 77.6
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 3.0e-74 282.0 161 77.0
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 4.0e-74 281.6 162 78.4
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 6.8e-74 280.8 161 76.4
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 6.8e-74 280.8 160 79.4
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.8e-74 280.8 160 79.4
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.8e-74 280.8 160 79.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 6.8e-74 280.8 157 79.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.8e-74 280.8 158 80.4
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.8e-74 280.8 158 80.4
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 8.8e-74 280.4 158 78.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 8.8e-74 280.4 161 75.8
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 8.8e-74 280.4 161 77.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-73 280.0 157 81.5
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 77.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.5e-73 279.6 149 84.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.5e-73 279.6 158 78.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.0e-73 279.3 161 76.4
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.0e-73 279.3 163 74.8
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.0e-73 279.3 160 76.9
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 2.0e-73 279.3 161 78.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.6e-73 278.9 158 80.4
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.6e-73 278.9 161 78.3
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.4e-73 278.5 154 80.5
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 4.4e-73 278.1 161 75.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.7e-73 277.7 154 79.9
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 7.5e-73 277.3 158 77.8
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 7.5e-73 277.3 158 77.8
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 9.8e-73 276.9 158 80.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.2e-72 275.8 155 80.6
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 79.1
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.9e-72 274.6 154 80.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.9e-72 274.6 158 77.2
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 8.3e-72 273.9 171 71.9
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-71 273.5 169 72.8
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 4.1e-71 271.6 157 78.3
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 5.4e-71 271.2 158 77.8
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 7.0e-71 270.8 148 80.4
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 9.2e-71 270.4 158 77.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.2e-70 270.0 154 76.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.7e-70 268.9 154 76.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.5e-70 268.1 135 91.9
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 5.9e-70 267.7 162 74.7
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.9e-70 267.7 161 75.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 7.7e-70 267.3 154 76.6
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 7.7e-70 267.3 214 59.8
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.8e-69 265.0 162 73.5
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.9e-68 262.7 157 74.5
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 7.3e-68 260.8 161 72.0
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.6e-67 259.6 156 75.0
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 2.1e-67 259.2 161 75.8
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.7e-67 258.1 161 71.4
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 8.0e-67 257.3 162 71.0
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 8.0e-67 257.3 148 76.4
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.8e-66 256.1 145 80.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 6.8e-66 254.2 141 81.6
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 3.4e-65 251.9 158 75.3
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-63 245.7 135 80.0
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 9.2e-63 243.8 138 78.3
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 2.3e-61 239.2 137 77.4
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.6e-61 237.3 155 67.7
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 6.8e-58 227.6 161 70.8
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 8.9e-58 227.3 117 88.9
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.5e-57 226.5 138 75.4
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 8.3e-56 220.7 152 68.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.4e-55 219.2 137 73.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.7e-53 213.0 114 83.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.9e-52 209.5 116 83.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.9e-52 209.5 121 80.2
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.9e-52 209.5 183 59.0
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.9e-52 209.5 140 67.9
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.1e-51 206.1 149 59.7
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.6e-51 205.3 142 59.9
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.6e-49 199.1 142 58.5
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.4e-49 198.4 159 61.0
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 4.9e-48 194.9 152 61.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.4e-47 191.4 137 65.0
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 6.6e-45 184.5 99 80.8
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.6e-43 179.9 95 83.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 2.2e-40 169.5 102 72.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.9e-37 158.7 158 55.7
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.5e-36 156.8 171 46.2
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.7e-35 151.8 135 57.8
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.2e-34 148.3 85 80.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 5.8e-33 144.8 86 76.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.1e-26 124.0 73 76.7
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.0e-21 107.5 52 90.4
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.2e-17 94.0 60 70.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-09 67.0 71 46.5


User provided reference genes

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