Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.4e-28 129.0 122 100.0
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 6.2e-16 87.8 58 77.6
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 2.2e-13 79.3 73 71.2
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 1.2e-11 73.6 64 53.1
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 1.2e-11 73.6 64 53.1
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 2.1e-11 72.8 34 91.2
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 2.1e-11 72.8 59 59.3
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 6.0e-11 71.2 34 85.3
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 6.0e-11 71.2 34 85.3
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.0e-10 70.5 34 88.2
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 85.3
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 85.3
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 85.3
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 88.2
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 88.2
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 88.2
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 1.3e-10 70.1 34 88.2
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 1.8e-10 69.7 34 82.4
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.8e-10 69.7 34 88.2
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 2.3e-10 69.3 33 84.8
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 2.3e-10 69.3 34 85.3
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.3e-10 69.3 34 85.3
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 3.9e-10 68.6 34 88.2
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.9e-10 68.6 33 87.9
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 5.1e-10 68.2 34 85.3
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 5.1e-10 68.2 34 85.3
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 6.7e-10 67.8 34 85.3
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 6.7e-10 67.8 34 85.3
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 6.7e-10 67.8 34 85.3
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 6.7e-10 67.8 34 85.3
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 6.7e-10 67.8 34 85.3
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 8.7e-10 67.4 34 85.3
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 8.7e-10 67.4 34 82.4
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.1e-09 67.0 63 71.4
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.1e-09 67.0 34 82.4
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 85.3
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 1.5e-09 66.6 34 82.4
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 1.9e-09 66.2 34 82.4
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.9e-09 66.2 32 84.4
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 2.5e-09 65.9 32 87.5
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 3.3e-09 65.5 34 79.4
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 3.3e-09 65.5 32 87.5
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 4.3e-09 65.1 34 79.4
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 4.3e-09 65.1 34 76.5
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 4.3e-09 65.1 33 81.8
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 5.6e-09 64.7 33 81.8
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 5.6e-09 64.7 32 84.4
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 5.6e-09 64.7 32 84.4
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 5.6e-09 64.7 33 81.8
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 7.4e-09 64.3 34 82.4
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 7.4e-09 64.3 34 82.4
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 7.4e-09 64.3 34 82.4
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 7.4e-09 64.3 34 76.5
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 9.6e-09 63.9 34 76.5
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 9.6e-09 63.9 34 76.5
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 9.6e-09 63.9 34 76.5
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 9.6e-09 63.9 34 79.4
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 1.3e-08 63.5 34 76.5
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 1.6e-08 63.2 34 76.5
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 1.6e-08 63.2 34 76.5
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 1.6e-08 63.2 34 79.4
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 1.6e-08 63.2 34 79.4
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 2.1e-08 62.8 32 81.2
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 2.1e-08 62.8 34 76.5
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 3.7e-08 62.0 34 76.5
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 3.7e-08 62.0 34 76.5
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 4.8e-08 61.6 34 76.5
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 4.8e-08 61.6 34 73.5
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 6.2e-08 61.2 34 76.5
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 6.2e-08 61.2 32 78.1
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 6.2e-08 61.2 34 79.4
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 8.1e-08 60.8 34 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 1.1e-07 60.5 61 47.5
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.1e-07 60.5 34 76.5
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 2.4e-07 59.3 34 73.5
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 4.5e-06 55.1 34 61.8
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.6e-06 54.3 32 71.9


User provided reference genes

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