Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-71 271.6 128 100.0
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 1.1e-60 236.5 112 95.5
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 1.5e-52 209.5 117 84.6
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 3.3e-52 208.4 117 83.8
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 5.7e-52 207.6 117 82.1
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 2.1e-46 189.1 114 80.7
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 1.1e-39 166.8 114 70.2
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.4e-39 166.4 112 72.3
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.9e-39 166.0 114 67.5
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 5.5e-39 164.5 114 66.7
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.2e-38 163.3 114 65.8
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 1.6e-38 162.9 114 66.7
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 2.1e-38 162.5 114 68.4
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 2.1e-38 162.5 114 68.4
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 4.6e-38 161.4 114 64.9
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 4.6e-38 161.4 114 65.8
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 4.6e-38 161.4 114 65.8
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 6.1e-38 161.0 114 67.5
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 2.3e-37 159.1 114 66.7
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 5.1e-37 157.9 114 65.8
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 8.8e-37 157.1 114 65.8
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 1.5e-36 156.4 114 66.7
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 1.5e-36 156.4 114 64.0
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 3.3e-36 155.2 114 62.3
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 5.7e-36 154.5 114 65.8
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 2.2e-35 152.5 115 64.3
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 6.3e-35 151.0 119 63.0
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 8.2e-35 150.6 114 62.3
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 4.1e-34 148.3 114 63.2
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.2e-33 146.7 114 63.2
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.3e-32 143.3 114 58.8
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 5.5e-31 137.9 114 59.6
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 7.2e-31 137.5 114 62.3
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 9.4e-31 137.1 115 60.9
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 1.6e-30 136.3 121 59.5
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 1.5e-28 129.8 114 57.9
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.5e-28 129.8 119 58.8
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 2.0e-28 129.4 122 59.0
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 2.0e-28 129.4 119 58.8
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 2.6e-28 129.0 119 58.8
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 5.7e-28 127.9 96 64.6
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 7.4e-28 127.5 120 59.2
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 7.4e-28 127.5 114 55.3
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 9.7e-28 127.1 113 56.6
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 9.7e-28 127.1 115 52.2
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 9.7e-28 127.1 119 58.0
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 1.3e-27 126.7 118 58.5
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 1.7e-27 126.3 118 57.6
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 4.8e-27 124.8 118 56.8
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 5.3e-26 121.3 124 48.4
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.5e-25 119.8 174 42.5
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 5.0e-24 114.8 104 58.7
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 8.5e-24 114.0 113 52.2
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 1.6e-22 109.8 117 47.9
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 2.1e-22 109.4 114 48.2
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 3.6e-22 108.6 126 47.6
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 8.0e-22 107.5 117 52.1
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 8.0e-22 107.5 118 51.7
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 6.3e-19 97.8 166 40.4
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 1.4e-18 96.7 75 60.0
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 5.3e-18 94.7 72 65.3
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 9.1e-18 94.0 144 36.8
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 1.6e-17 93.2 116 41.4
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 2.0e-17 92.8 151 37.1
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 5.0e-16 88.2 64 67.2
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.5e-15 86.7 48 81.2
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.8e-13 79.7 73 53.4
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 5.2e-13 78.2 53 67.9
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 2.6e-12 75.9 71 56.3
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 4.4e-12 75.1 52 65.4
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 4.4e-12 75.1 48 72.9
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 4.4e-12 75.1 76 53.9
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 9.8e-12 73.9 54 63.0
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.3e-11 73.6 43 72.1
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.7e-11 73.2 43 74.4
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 2.8e-11 72.4 44 72.7
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 4.8e-11 71.6 43 72.1
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 6.3e-11 71.2 45 66.7
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 1.1e-10 70.5 43 69.8
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 1.4e-10 70.1 47 63.8
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 4.1e-10 68.6 42 73.8
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 4.1e-10 68.6 75 49.3
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 1.2e-09 67.0 70 52.9
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 4.5e-09 65.1 54 57.4
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 7.7e-09 64.3 43 65.1
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.7e-08 63.2 53 56.6
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 8.5e-08 60.8 43 62.8
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 7.2e-07 57.8 32 75.0
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 2.7e-06 55.8 42 66.7
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 4.7e-06 55.1 34 67.6
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 4.7e-06 55.1 53 52.8
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 8.0e-06 54.3 33 66.7


User provided reference genes

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