Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.5e-69 265.4 139 100.0
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.2e-68 263.1 139 99.3
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.3e-65 253.1 132 97.7
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.1e-64 250.0 131 98.5
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 1.2e-63 246.5 131 95.4
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 1.2e-63 246.5 131 96.2
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 1.2e-63 246.5 131 96.2
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 4.5e-63 244.6 131 95.4
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 5.9e-63 244.2 131 96.2
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 5.9e-63 244.2 131 96.2
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 7.7e-63 243.8 131 95.4
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 2.9e-62 241.9 131 94.7
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 2.9e-62 241.9 131 93.9
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 3.8e-62 241.5 131 93.9
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 5.0e-62 241.1 131 93.9
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 5.0e-62 241.1 131 92.4
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 6.5e-62 240.7 131 93.1
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 8.5e-62 240.4 131 94.7
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 8.5e-62 240.4 131 92.4
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 8.5e-62 240.4 131 92.4
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.1e-61 240.0 131 93.1
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 1.1e-61 240.0 131 93.1
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 1.5e-61 239.6 131 93.1
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 1.5e-61 239.6 131 92.4
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 1.9e-61 239.2 131 93.1
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.9e-61 239.2 131 92.4
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.9e-61 239.2 131 92.4
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 1.9e-61 239.2 131 93.1
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 1.9e-61 239.2 131 93.1
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 2.5e-61 238.8 131 93.1
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 2.5e-61 238.8 131 92.4
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 2.5e-61 238.8 131 92.4
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 3.2e-61 238.4 134 89.6
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 3.2e-61 238.4 131 93.1
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 4.2e-61 238.0 129 93.8
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 4.2e-61 238.0 131 93.1
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 5.5e-61 237.7 131 91.6
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 7.2e-61 237.3 131 91.6
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 7.2e-61 237.3 131 92.4
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 9.4e-61 236.9 131 92.4
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 9.4e-61 236.9 131 91.6
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 9.4e-61 236.9 131 91.6
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 1.6e-60 236.1 131 90.8
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 1.6e-60 236.1 131 92.4
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 1.6e-60 236.1 131 92.4
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.1e-60 235.7 131 90.8
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.1e-60 235.7 131 90.8
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 2.1e-60 235.7 131 92.4
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.7e-60 235.3 131 90.8
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 2.7e-60 235.3 131 90.8
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 2.7e-60 235.3 131 91.6
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 3.6e-60 235.0 131 91.6
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 3.6e-60 235.0 131 92.4
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 3.6e-60 235.0 131 90.8
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 3.6e-60 235.0 131 91.6
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 3.6e-60 235.0 131 90.1
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 4.7e-60 234.6 131 90.8
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 4.7e-60 234.6 130 92.3
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 4.7e-60 234.6 131 92.4
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 6.1e-60 234.2 131 91.6
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 6.1e-60 234.2 131 89.3
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 6.1e-60 234.2 131 90.8
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 6.1e-60 234.2 131 90.8
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 8.0e-60 233.8 131 91.6
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 8.0e-60 233.8 129 90.7
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 8.0e-60 233.8 137 86.9
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 1.0e-59 233.4 131 91.6
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.4e-59 233.0 131 90.8
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 1.4e-59 233.0 131 92.4
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 1.4e-59 233.0 129 92.2
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 1.4e-59 233.0 129 92.2
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 1.4e-59 233.0 131 90.8
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 1.4e-59 233.0 131 89.3
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.8e-59 232.6 131 90.8
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 1.8e-59 232.6 131 91.6
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 1.8e-59 232.6 131 90.1
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.8e-59 232.6 131 90.1
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 1.8e-59 232.6 131 89.3
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 3.0e-59 231.9 131 90.1
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 4.0e-59 231.5 131 91.6
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 4.0e-59 231.5 131 90.1
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.2e-59 231.1 131 90.1
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 6.8e-59 230.7 131 88.5
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 8.8e-59 230.3 131 89.3
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 8.8e-59 230.3 131 89.3
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 8.8e-59 230.3 131 89.3
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 1.5e-58 229.6 131 87.8
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 2.0e-58 229.2 129 89.1
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 2.0e-58 229.2 131 88.5
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.6e-58 228.8 123 94.3
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 2.6e-58 228.8 129 89.1
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 4.4e-58 228.0 131 88.5
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 5.7e-58 227.6 131 87.8
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 5.7e-58 227.6 129 88.4
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 7.5e-58 227.3 131 86.3
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 9.8e-58 226.9 131 89.3
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 1.7e-57 226.1 131 86.3
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 2.2e-57 225.7 131 87.8
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.2e-57 225.7 131 89.3
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 2.8e-57 225.3 131 87.8
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 4.9e-57 224.6 131 87.8
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 6.3e-57 224.2 131 87.0
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 1.1e-56 223.4 131 86.3
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 1.4e-56 223.0 130 86.2
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.4e-56 223.0 131 87.8
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 1.8e-56 222.6 131 86.3
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 2.4e-56 222.2 131 86.3
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 3.1e-56 221.9 126 85.7
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 3.1e-56 221.9 126 85.7
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 3.1e-56 221.9 131 88.5
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 3.1e-56 221.9 131 88.5
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 5.4e-56 221.1 126 85.7
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 5.4e-56 221.1 115 95.7
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 5.4e-56 221.1 115 96.5
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 7.0e-56 220.7 126 87.3
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 9.1e-56 220.3 131 83.2
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 9.1e-56 220.3 126 86.5
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 1.6e-55 219.5 131 87.0
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 2.0e-55 219.2 126 85.7
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 2.0e-55 219.2 126 85.7
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.0e-55 219.2 131 87.0
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 2.0e-55 219.2 126 86.5
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 2.7e-55 218.8 126 84.9
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 2.7e-55 218.8 115 94.8
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 5.9e-55 217.6 115 94.8
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 5.9e-55 217.6 131 87.0
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 3.8e-54 214.9 129 84.5
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.8e-54 214.9 111 98.2
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 1.1e-53 213.4 133 82.0
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 4.3e-53 211.5 110 96.4
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 9.5e-53 210.3 115 92.2
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 1.2e-52 209.9 160 72.5
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 2.8e-52 208.8 139 77.7
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 8.0e-52 207.2 139 77.0
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 1.0e-51 206.8 156 73.7
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.4e-51 206.5 114 89.5
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 8.9e-51 203.8 122 87.7
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 1.7e-49 199.5 119 79.0
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.2e-49 199.1 128 76.6
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 7.0e-48 194.1 117 77.8
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-47 193.0 117 84.6
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.8e-47 190.7 105 89.5
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.8e-47 190.7 105 89.5
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 7.8e-47 190.7 129 77.5
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.0e-46 190.3 102 91.2
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 1.7e-46 189.5 126 71.4
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 3.9e-46 188.3 100 92.0
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 9.5e-45 183.7 122 72.1
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-43 179.9 102 86.3
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 6.8e-43 177.6 115 81.7
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 6.8e-43 177.6 115 81.7
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 9.8e-42 173.7 98 84.7
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 4.9e-41 171.4 131 72.5
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 2.0e-39 166.0 115 66.1
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.7e-39 165.6 102 81.4
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 5.0e-38 161.4 115 67.0
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.1e-37 160.2 129 67.4
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 2.5e-37 159.1 89 89.9
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 7.3e-37 157.5 115 64.3
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.2e-36 156.8 82 93.9
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.2e-36 156.8 103 79.6
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 6.2e-36 154.5 82 92.7
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.4e-35 153.3 82 91.5
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 7.8e-31 137.5 80 86.2
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 6.8e-27 124.4 78 78.2
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 1.5e-26 123.2 77 75.3
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 2.6e-26 122.5 156 49.4
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.6e-26 122.5 132 56.1
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.3e-25 120.2 63 95.2
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 1.1e-24 117.1 112 48.2
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.7e-23 112.5 69 82.6
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 5.6e-21 104.8 55 94.5
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 2.1e-20 102.8 52 96.2
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 2.8e-20 102.4 52 96.2
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 1.4e-19 100.1 80 65.0
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 2.4e-16 89.4 58 84.5
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 9.6e-13 77.4 48 79.2
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 6.9e-11 71.2 35 94.3
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 9.0e-11 70.9 35 88.6


User provided reference genes

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