Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000359g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.0e-94 347.1 171 100.0
Nitab4.5_0003679g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.6e-40 167.9 166 57.8
Nitab4.5_0002356g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-36 156.8 168 55.4
Nitab4.5_0014138g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.6e-36 156.0 169 56.2
Nitab4.5_0002588g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-32 143.3 165 50.3
Nitab4.5_0005587g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.8e-30 135.2 161 49.1
Nitab4.5_0001811g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.0e-29 132.1 240 36.7
Nitab4.5_0012419g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-25 120.2 73 79.5
Nitab4.5_0007412g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.6e-25 118.6 83 69.9
Nitab4.5_0000059g0630 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.1e-24 115.2 116 56.0
Nitab4.5_0003679g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.1e-22 109.8 66 83.3
CAN.G2500.1 Capsicum annuum HOM05D007579 ORTHO05D000285 3.1e-21 105.9 160 40.6
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 9.0e-21 104.4 118 48.3
Nitab4.5_0006555g0040 Nicotiana tabacum HOM05D007579 ORTHO05D284009 4.2e-18 95.5 156 40.4
Nitab4.5_0007287g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.2e-18 95.5 87 62.1
Nitab4.5_0002745g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-17 93.6 138 44.2
Nitab4.5_0004989g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.3e-15 85.9 94 53.2
Nitab4.5_0000062g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-14 84.0 147 39.5
Nitab4.5_0002507g0110 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-14 84.0 50 86.0
Nitab4.5_0004614g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-14 84.0 50 86.0
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 4.8e-14 82.0 111 40.5
Peaxi162Scf00558g00416 Petunia axillaris HOM05D007579 ORTHO05D000285 6.2e-14 81.6 165 33.3
Nitab4.5_0000915g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-13 80.1 197 34.0
PGSC0003DMG400041016 Solanum tuberosum HOM05D007579 ORTHO05D000285 1.8e-13 80.1 70 52.9
Peaxi162Scf00174g00006 Petunia axillaris HOM05D007579 ORTHO05D000285 2.4e-13 79.7 76 48.7
PGSC0003DMG400037326 Solanum tuberosum HOM05D007579 ORTHO05D000285 5.3e-13 78.6 70 50.0
Nitab4.5_0002600g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.9e-13 78.2 139 40.3
Nitab4.5_0003230g0090 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.9e-13 78.2 157 35.7
Nitab4.5_0003606g0080 Nicotiana tabacum HOM05D007579 ORTHO05D283450 1.5e-12 77.0 121 40.5
Nitab4.5_0000720g0140 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.5e-12 75.5 70 58.6
Nitab4.5_0000801g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.2e-10 69.3 99 43.4
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.5e-10 68.6 72 47.2
Nitab4.5_0000297g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.1e-10 68.2 99 41.4
Peaxi162Scf00973g00320 Petunia axillaris HOM05D007579 ORTHO05D000285 7.1e-10 68.2 85 43.5
Nitab4.5_0001611g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.2e-09 67.4 78 41.0
Peaxi162Scf00201g01410 Petunia axillaris HOM05D007579 ORTHO05D000037 1.2e-09 67.4 51 58.8
Nitab4.5_0000072g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 2.7e-09 66.2 113 39.8
Nitab4.5_0006822g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.5e-09 65.9 72 47.2
Nitab4.5_0000506g0250 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.1e-09 65.1 149 34.9
Nitab4.5_0001872g0050 Nicotiana tabacum HOM05D007579 ORTHO05D014074 1.3e-08 63.9 136 38.2
Nitab4.5_0020090g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.3e-08 63.2 56 51.8
Peaxi162Scf00593g00324 Petunia axillaris HOM05D007579 ORTHO05D000285 8.7e-08 61.2 86 37.2
Nitab4.5_0008299g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.1e-07 60.8 77 40.3
Nitab4.5_0012930g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-07 60.5 72 43.1
Solyc04g049020.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 1.5e-07 60.5 46 60.9
Nitab4.5_0000545g0010 Nicotiana tabacum HOM05D007579 ORTHO05D014074 2.5e-07 59.7 100 39.0
Peaxi162Scf00386g00007 Petunia axillaris HOM05D007579 ORTHO05D000285 4.3e-07 58.9 160 30.6
Sopen06g005920 Solanum pennellii HOM05D000034 ORTHO05D000037 7.4e-07 58.2 46 58.7
Solyc09g015810.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.8e-06 56.2 45 57.8
Solyc12g150115.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.8e-06 56.2 46 56.5
Nitab4.5_0000666g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.7e-06 55.8 62 48.4
Peaxi162Scf00298g00614 Petunia axillaris HOM05D007579 ORTHO05D000285 3.7e-06 55.8 49 51.0
CAN.G134.83 Capsicum annuum HOM05D001789 ORTHO05D001755 6.3e-06 55.1 47 57.4
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 8.2e-06 54.7 145 26.9


User provided reference genes

Program Settings