Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000357g0290 Nicotiana tabacum HOM05D004074 ORTHO05D004717 8.3e-34 146.4 69 100.0
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.6e-29 131.0 62 96.8
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.2e-29 130.2 61 98.4
Nitab4.5_0007548g0020 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.1e-28 127.9 61 96.7
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 4.0e-28 127.5 61 93.4
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 4.0e-28 127.5 61 93.4
CAN.G1073.1 Capsicum annuum HOM05D004074 ORTHO05D004717 5.2e-28 127.1 61 93.4
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 5.2e-28 127.1 61 93.4
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 5.2e-28 127.1 61 93.4
CAN.G790.25 Capsicum annuum HOM05D004074 ORTHO05D004717 1.2e-27 125.9 61 93.4
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 1.5e-27 125.6 61 91.8
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.5e-27 125.6 61 91.8
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.0e-27 125.2 61 91.8
Solyc12g055760.2 Solanum lycopersicum HOM05D004074 ORTHO05D004717 3.4e-27 124.4 61 90.2
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 4.4e-27 124.0 61 90.2
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 4.4e-27 124.0 61 90.2
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 4.4e-27 124.0 61 90.2
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 1.3e-26 122.5 61 88.5
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 1.3e-26 122.5 61 88.5
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.7e-26 122.1 61 88.5
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.2e-26 121.7 61 88.5
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.2e-26 121.7 61 88.5
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 2.2e-26 121.7 61 88.5
Manes.05G195000 Manihot esculenta HOM05D004074 ORTHO05D004717 2.2e-26 121.7 61 88.5
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 2.9e-26 121.3 61 86.9
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 2.9e-26 121.3 61 86.9
ClCG09G001480 Citrullus lanatus HOM05D004074 ORTHO05D004717 2.9e-26 121.3 61 88.5
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 4.9e-26 120.6 61 85.2
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 4.9e-26 120.6 61 86.9
Actinidia31138 Actinidia chinensis HOM05D004074 ORTHO05D004717 6.4e-26 120.2 61 86.9
Dinv20359 Davidia involucrata HOM05D004074 ORTHO05D004717 6.4e-26 120.2 61 86.9
Rhsim06G0076700 Rhododendron simsii HOM05D004074 ORTHO05D004717 6.4e-26 120.2 61 86.9
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 85.2
MELO3C024297.2 Cucumis melo HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 86.9
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 83.6
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 83.6
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 83.6
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 86.9
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 1.1e-25 119.4 61 86.9
Cc01_g08930 Coffea canephora HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 86.9
Dinv37799 Davidia involucrata HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 85.2
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 83.6
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 83.6
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 83.6
Hma1.2p1_0039F.1_g024790 Hydrangea macrophylla HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 85.2
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 1.4e-25 119.0 61 83.6
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 1.9e-25 118.6 61 86.9
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 2.4e-25 118.2 61 82.0
Gohir.A12G001600 Gossypium hirsutum HOM05D004074 ORTHO05D004717 2.4e-25 118.2 61 82.0
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 2.4e-25 118.2 61 82.0
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 3.2e-25 117.9 61 82.0
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 3.2e-25 117.9 61 82.0
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 3.2e-25 117.9 61 83.6
HanXRQChr12g0359921 Helianthus annuus HOM05D004074 ORTHO05D004717 3.2e-25 117.9 61 83.6
CsaV3_7G033840 Cucumis sativus L. HOM05D004074 ORTHO05D004717 4.1e-25 117.5 61 85.2
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 4.1e-25 117.5 61 82.0
Duzib187G1118 Durio zibethinus HOM05D004074 ORTHO05D004717 4.1e-25 117.5 61 82.0
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 4.1e-25 117.5 61 82.0
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 4.1e-25 117.5 61 82.0
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 4.1e-25 117.5 62 83.9
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 5.4e-25 117.1 61 82.0
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 5.4e-25 117.1 61 82.0
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 5.4e-25 117.1 61 82.0
Thhalv10021996m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 7.1e-25 116.7 61 82.0
BcaB04g19151 Brassica carinata HOM05D004074 ORTHO05D004717 9.2e-25 116.3 61 82.0
BcaC01g03518 Brassica carinata HOM05D004074 ORTHO05D004717 9.2e-25 116.3 61 82.0
BolC3t17439H Brassica oleracea HOM05D000606 ORTHO05D001265 9.2e-25 116.3 61 82.0
BraA03t13364Z Brassica rapa HOM05D000606 ORTHO05D001265 9.2e-25 116.3 61 82.0
CARHR097100 Cardamine hirsuta HOM05D004074 ORTHO05D004717 9.2e-25 116.3 61 82.0
Sed0005809 Sechium edule HOM05D004074 ORTHO05D004717 9.2e-25 116.3 61 82.0
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 1.2e-24 115.9 61 80.3
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 1.2e-24 115.9 61 80.3
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 1.2e-24 115.9 61 82.0
Potri.008G008900 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.2e-24 115.9 61 83.6
Potri.010G250000 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.2e-24 115.9 61 83.6
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 82.0
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 82.0
MD09G1158500 Malus domestica HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 78.7
Phvul.008G255900 Phaseolus vulgaris HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 80.3
Sabra10G0194600 Salix brachista HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 83.6
TWI77G0047 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 1.6e-24 115.5 61 82.0
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 2.1e-24 115.2 61 80.3
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 2.1e-24 115.2 61 80.3
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 3.5e-24 114.4 60 81.7
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 3.5e-24 114.4 59 83.1
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 3.5e-24 114.4 59 83.1
Prupe.3G167500 Prunus persica HOM05D004074 ORTHO05D004717 3.5e-24 114.4 61 78.7
TWI53G1078 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 3.5e-24 114.4 61 80.3
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 3.5e-24 114.4 61 80.3
BcaB04g20604 Brassica carinata HOM05D004074 ORTHO05D004717 4.6e-24 114.0 61 80.3
BcaNung05296 Brassica carinata HOM05D004074 ORTHO05D004717 4.6e-24 114.0 61 80.3
A01p33680 Brassica napus HOM05D004074 ORTHO05D004717 4.6e-24 114.0 61 80.3
RcHm_v2.0_Chr2g0150171 Rosa chinensis HOM05D004074 ORTHO05D004717 4.6e-24 114.0 61 80.3
Aa31LG8G7900 Aethionema arabicum HOM05D004074 ORTHO05D004717 6.0e-24 113.6 61 82.0
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 6.0e-24 113.6 61 78.7
Thhalv10011901m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 7.8e-24 113.2 61 78.7
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 7.8e-24 113.2 61 80.3
MBI04_g18036_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 7.8e-24 113.2 67 73.1
Psat1g059640 Pisum sativum HOM05D004074 ORTHO05D004717 7.8e-24 113.2 61 78.7
Sp3g19200 Schrenkiella parvula HOM05D004074 ORTHO05D004717 7.8e-24 113.2 61 78.7
BolC1t04251H Brassica oleracea HOM05D004074 ORTHO05D004717 1.0e-23 112.8 61 78.7
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 1.0e-23 112.8 61 80.3
CDE05G2863 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 1.0e-23 112.8 61 77.0
DCAR_007668 Daucus carota HOM05D004074 ORTHO05D004717 1.0e-23 112.8 60 80.0
Hund14448 Selenicereus undatus HOM05D004074 ORTHO05D004717 1.0e-23 112.8 59 81.4
unitig_32.g11555 Utricularia gibba HOM05D004074 ORTHO05D004717 1.0e-23 112.8 61 82.0
Aa31LG10G3130 Aethionema arabicum HOM05D004074 ORTHO05D004717 1.3e-23 112.5 61 80.3
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 1.3e-23 112.5 61 78.7
Glyma.08G222900 Glycine max HOM05D004074 ORTHO05D004717 1.3e-23 112.5 61 77.0
QL05p083316 Quercus lobata HOM05D004074 ORTHO05D004717 1.3e-23 112.5 60 80.0
Hund11291 Selenicereus undatus HOM05D004074 ORTHO05D004717 1.3e-23 112.5 59 83.1
Sabra08G0005100 Salix brachista HOM05D004074 ORTHO05D004717 1.7e-23 112.1 62 79.0
SHI21232 Sapria himalayana HOM05D004074 ORTHO05D004717 1.7e-23 112.1 61 80.3
BcaB02g11264 Brassica carinata HOM05D004074 ORTHO05D004717 2.3e-23 111.7 61 78.7
A05p19470 Brassica napus HOM05D004074 ORTHO05D004717 2.3e-23 111.7 61 78.7
C01p43050 Brassica napus HOM05D004074 ORTHO05D004717 2.3e-23 111.7 61 77.0
BraA05t20851Z Brassica rapa HOM05D004074 ORTHO05D004717 2.3e-23 111.7 61 78.7
CANSAT01G1956 Cannabis sativa HOM05D004074 ORTHO05D004717 2.3e-23 111.7 61 80.3
Ah.07g199420 Amaranthus hybridus HOM05D004074 ORTHO05D004717 3.0e-23 111.3 57 86.0
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 3.0e-23 111.3 61 75.4
TPR.G2285 Trifolium pratense HOM05D004074 ORTHO05D004717 3.0e-23 111.3 61 77.0
EL10Ac5g12205 Beta vulgaris HOM05D004074 ORTHO05D004717 3.9e-23 110.9 62 77.4
Glyma.07G003700 Glycine max HOM05D004074 ORTHO05D004717 3.9e-23 110.9 61 77.0
arahy.Tifrunner.gnm1.ann1.9ZAP4M Arachis hypogaea HOM05D004074 ORTHO05D004717 6.6e-23 110.2 60 75.0
BcaC08g43926 Brassica carinata HOM05D004074 ORTHO05D004717 6.6e-23 110.2 61 78.7
C06p13180 Brassica napus HOM05D004074 ORTHO05D004717 6.6e-23 110.2 61 78.7
BolC6t36474H Brassica oleracea HOM05D004074 ORTHO05D004717 6.6e-23 110.2 61 78.7
BcaC09g49057 Brassica carinata HOM05D004074 ORTHO05D004717 1.1e-22 109.4 61 75.4
Lalb_Chr25g0278611 Lupinus albus HOM05D004074 ORTHO05D004717 1.5e-22 109.0 61 75.4
Psat7g263760 Pisum sativum HOM05D004074 ORTHO05D004717 1.5e-22 109.0 60 73.3
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 1.9e-22 108.6 60 76.7
TAR383G0992 Trochodendron aralioides HOM05D004074 ORTHO05D004717 1.9e-22 108.6 59 76.3
TAR626G1506 Trochodendron aralioides HOM05D004074 ORTHO05D004717 1.9e-22 108.6 60 75.0
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 2.5e-22 108.2 56 80.4
Medtr5g040610 Medicago truncatula HOM05D004074 ORTHO05D004717 4.3e-22 107.5 60 75.0
Aqoxy7G03184 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 5.6e-22 107.1 61 78.7
QL05p083267 Quercus lobata HOM05D004074 ORTHO05D004717 7.3e-22 106.7 60 75.0
SEGI_28642 Sequoiadendron giganteum HOM05D004074 ORTHO05D004717 7.3e-22 106.7 61 73.8
SGA_v2.0_scaffold71G24013 Striga asiatica HOM05D001270 ORTHO05D001099 7.3e-22 106.7 60 76.7
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 9.6e-22 106.3 62 71.0
PSO170G4934 Papaver somniferum HOM05D004074 ORTHO05D004717 1.6e-21 105.5 60 76.7
PSO339G3796 Papaver somniferum HOM05D004074 ORTHO05D004717 1.6e-21 105.5 60 76.7
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 2.1e-21 105.1 61 75.4
C02p10320 Brassica napus HOM05D004074 ORTHO05D004717 2.1e-21 105.1 61 75.4
AUR62018789 Chenopodium quinoa HOM05D004074 ORTHO05D004717 2.1e-21 105.1 61 77.0
BcaC08g44915 Brassica carinata HOM05D004074 ORTHO05D004717 4.7e-21 104.0 62 74.2
C06p25410 Brassica napus HOM05D004074 ORTHO05D004717 4.7e-21 104.0 62 74.2
BolC6t37702H Brassica oleracea HOM05D004074 ORTHO05D004717 4.7e-21 104.0 62 74.2
Aqoxy5G02869 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 1.1e-20 102.8 58 77.6
Zm00001eb161770 Zea mays HOM05D004074 ORTHO05D004717 1.1e-20 102.8 60 73.3
Zm00001eb357940 Zea mays HOM05D004074 ORTHO05D004717 1.1e-20 102.8 60 73.3
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 4.0e-20 100.9 58 72.4
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 2.0e-19 98.6 60 70.0
GSVIVG01037184001 Vitis vinifera HOM05D004074 ORTHO05D004717 2.6e-19 98.2 57 73.7
AagrBONN_evm.TU.Sc2ySwM_117.3571 Anthoceros agrestis HOM05D004074 ORTHO05D004717 3.2e-17 91.3 66 60.6
SalBow6G5392 Salvia bowleyana HOM05D004074 ORTHO05D004717 3.2e-17 91.3 47 83.0
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 5.4e-17 90.5 47 78.7
AagrBONN_evm.TU.Sc2ySwM_344.1495 Anthoceros agrestis HOM05D004074 ORTHO05D004717 1.6e-16 89.0 66 59.1
HPP92_021648 Vanilla planifolia HOM05D004074 ORTHO05D004717 2.1e-16 88.6 59 64.4
GSVIVG01037963001 Vitis vinifera HOM05D004074 ORTHO05D004717 2.7e-16 88.2 45 82.2
Lsat_1_v5_gn_5_137500 Lactuca sativa HOM05D001270 ORTHO05D001099 3.0e-15 84.7 46 80.4
SMO351G0623 Selaginella moellendorffii HOM05D004074 ORTHO05D004717 3.9e-15 84.3 57 59.6
Pp3c1_12120 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.9e-14 82.0 65 55.4
Pp3c2_24870 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.9e-14 82.0 65 55.4
C02p45000 Brassica napus HOM05D000128 ORTHO05D000059 2.5e-14 81.6 45 77.8
Thhalv10022333m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 3.3e-14 81.3 61 62.3
Mapoly0001s0230 Marchantia polymorpha HOM05D004074 ORTHO05D004717 3.6e-13 77.8 59 54.2
MCO11G253 Micromonas commoda HOM05D004074 ORTHO05D004717 5.3e-12 73.9 63 49.2
PSO455G0136 Papaver somniferum HOM05D004074 ORTHO05D004717 2.0e-11 72.0 60 60.0
Pp3c1_10140 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.0e-11 72.0 59 54.2
Medtr4g005960 Medicago truncatula HOM05D004074 ORTHO05D004717 2.2e-10 68.6 53 56.6
PRCOL_00000946 Prasinoderma coloniale HOM05D004074 ORTHO05D004717 2.9e-10 68.2 56 50.0
Zm00001eb394860 Zea mays HOM05D004074 ORTHO05D004717 4.9e-10 67.4 47 59.6
Cre10.g420700 Chlamydomonas reinhardtii HOM05D004074 ORTHO05D004717 6.7e-07 57.0 52 44.2


User provided reference genes

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