Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.3e-145 519.6 252 100.0
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 9.9e-125 450.3 238 92.0
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.4e-102 376.7 238 79.0
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 1.2e-85 320.5 239 70.3
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 1.0e-81 307.4 241 66.8
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 6.9e-70 268.1 234 64.5
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 1.7e-68 263.5 234 64.1
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 8.3e-47 191.4 244 44.3
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 7.2e-43 178.3 198 50.0
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 2.0e-37 160.2 195 44.1
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.5e-37 159.1 209 42.6
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 4.5e-37 159.1 191 45.0
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.3e-36 157.5 200 47.0
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 5.0e-36 155.6 194 47.9
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 2.5e-35 153.3 204 45.1
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 3.3e-35 152.9 243 39.9
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 2.1e-34 150.2 248 39.9
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.6e-34 149.4 244 41.0
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 4.7e-34 149.1 190 46.3
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 8.0e-34 148.3 191 44.5
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.8e-33 147.1 194 43.3
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 2.3e-33 146.7 201 43.3
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 2.3e-33 146.7 191 45.0
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 8.9e-33 144.8 192 42.7
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 2.6e-32 143.3 191 42.9
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 5.7e-32 142.1 220 40.9
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 5.7e-32 142.1 220 40.9
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 7.5e-32 141.7 201 44.8
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 9.8e-32 141.4 231 37.7
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.3e-31 141.0 198 43.9
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.2e-31 140.2 193 42.5
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 2.8e-31 139.8 198 42.4
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 8.3e-31 138.3 208 39.9
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.2e-30 136.3 208 40.4
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 4.1e-30 136.0 208 40.4
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.2e-29 134.4 247 36.4
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.0e-28 131.3 225 37.3
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.3e-28 131.0 197 42.1
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.7e-28 130.6 248 38.3
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 2.9e-28 129.8 201 39.3
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 5.0e-28 129.0 201 38.8
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 1.1e-27 127.9 204 39.2
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.9e-27 127.1 196 42.9
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 2.5e-27 126.7 207 38.2
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 4.3e-27 125.9 199 38.7
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 5.6e-27 125.6 198 39.9
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 1.2e-26 124.4 197 40.1
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.2e-26 124.4 196 42.3
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.6e-26 124.0 204 39.2
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 4.7e-26 122.5 214 36.9
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 6.1e-26 122.1 203 38.4
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 1.0e-25 121.3 200 41.0
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 8.9e-25 118.2 196 36.7
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 8.9e-25 118.2 196 36.7
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 1.5e-24 117.5 196 40.8
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 7.5e-24 115.2 192 38.5
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 3.7e-23 112.8 218 37.2
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 6.4e-23 112.1 233 36.5
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 1.4e-22 110.9 201 39.8
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 2.4e-22 110.2 218 39.4
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 7.0e-22 108.6 256 31.6
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 7.0e-22 108.6 176 36.4
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 1.2e-21 107.8 206 33.5
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 1.2e-21 107.8 249 32.5
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.0e-21 107.1 151 41.7
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 7.8e-21 105.1 177 37.3
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 1.3e-20 104.4 242 30.2
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 1.7e-20 104.0 197 38.1
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 2.3e-20 103.6 200 37.0
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 5.0e-20 102.4 200 37.0
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.5e-19 100.1 162 39.5
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 3.3e-19 99.8 195 36.9
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 3.3e-19 99.8 220 33.6
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 3.6e-18 96.3 151 41.1
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 3.6e-18 96.3 221 36.2
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 3.6e-18 96.3 143 42.0
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.4e-17 94.4 230 33.9
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.5e-16 90.9 190 33.7
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.3e-15 87.8 128 40.6
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 6.4e-15 85.5 143 38.5
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 1.4e-14 84.3 146 37.7
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 3.2e-14 83.2 211 34.6
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.6e-13 80.9 141 36.9
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.7e-12 77.4 141 34.8
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 3.0e-12 76.6 134 39.6
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.9e-12 76.3 117 41.0
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 3.9e-12 76.3 203 29.1
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 9.5e-11 71.6 258 28.7
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 2.8e-10 70.1 150 34.0
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 4.7e-10 69.3 142 31.7
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.1e-09 68.2 146 30.1
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 3.1e-09 66.6 146 30.1
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 4.0e-09 66.2 47 57.4
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 2.6e-08 63.5 245 25.7
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 2.6e-08 63.5 144 31.9
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 3.4e-08 63.2 212 32.5
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 5.8e-08 62.4 154 31.8
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 7.6e-08 62.0 139 32.4
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 7.6e-08 62.0 154 32.5
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 9.9e-08 61.6 97 34.0
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 6.4e-07 58.9 136 32.4
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 6.4e-07 58.9 130 33.1
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 9.2e-06 55.1 139 30.2


User provided reference genes

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