Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.8e-260 901.4 432 100.0
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 9.9e-258 892.9 432 98.1
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 3.4e-242 841.3 430 90.2
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 1.6e-236 822.4 430 88.1
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 3.6e-236 821.2 430 87.9
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.1e-235 818.1 430 87.7
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 9.0e-235 816.6 438 86.3
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 7.6e-226 786.9 435 83.2
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 7.9e-223 776.9 431 87.7
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 2.3e-222 775.4 435 81.6
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 1.9e-221 772.3 431 81.4
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 1.3e-220 769.6 435 80.5
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 2.1e-220 768.8 430 82.3
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.1e-220 768.8 430 82.8
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 5.3e-219 764.2 430 80.5
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 4.9e-217 757.7 431 80.5
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 2.5e-216 755.4 438 80.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 4.6e-215 751.1 506 70.6
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 4.3e-213 744.6 429 80.0
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 8.2e-212 740.3 430 79.3
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 4.1e-211 738.0 435 78.4
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.2e-210 736.5 433 80.6
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 3.4e-210 734.9 438 78.3
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 7.7e-210 733.8 405 82.7
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 5.0e-209 731.1 429 78.3
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 3.2e-208 728.4 432 75.9
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 7.2e-208 727.2 436 78.0
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 2.1e-207 725.7 436 76.6
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.8e-206 722.6 434 76.3
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.8e-206 722.6 430 77.4
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 5.7e-205 717.6 427 77.5
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 9.7e-205 716.8 430 76.5
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 2.2e-204 715.7 393 81.7
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 3.7e-204 714.9 437 76.7
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 3.7e-204 714.9 434 76.3
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 4.8e-204 714.5 436 76.6
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 8.2e-204 713.8 433 75.1
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 1.1e-203 713.4 437 76.7
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.1e-203 713.4 435 76.6
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 1.1e-203 713.4 439 75.2
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 1.1e-203 713.4 436 76.1
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 3.1e-203 711.8 440 76.4
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 3.1e-203 711.8 442 76.2
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 4.1e-203 711.4 448 75.7
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 5.3e-203 711.1 434 76.5
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 6.9e-203 710.7 431 74.7
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 6.9e-203 710.7 441 75.5
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 6.9e-203 710.7 436 76.1
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 9.1e-203 710.3 435 76.3
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 1.2e-202 709.9 424 77.4
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 1.5e-202 709.5 436 75.0
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 2.0e-202 709.1 428 75.5
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 2.0e-202 709.1 430 75.1
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 4.5e-202 708.0 435 75.4
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 7.7e-202 707.2 436 76.4
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 1.3e-201 706.4 438 75.6
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.7e-201 706.1 435 75.2
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.2e-201 705.7 437 76.9
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 2.9e-201 705.3 438 76.9
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 3.8e-201 704.9 435 77.2
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 7.2e-200 700.7 437 74.8
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 9.4e-200 700.3 437 74.8
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 9.4e-200 700.3 450 74.2
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.2e-199 699.9 436 75.7
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.7e-199 698.7 431 73.5
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 3.6e-199 698.4 434 76.7
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.6e-199 698.4 444 74.1
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 4.7e-199 698.0 437 77.1
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 7.9e-199 697.2 435 76.8
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.0e-198 696.8 437 74.8
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 1.0e-198 696.8 405 78.3
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 1.8e-198 696.0 435 74.7
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 1.8e-198 696.0 450 74.0
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 2.3e-198 695.7 438 75.1
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 2.3e-198 695.7 450 73.8
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 2.3e-198 695.7 443 74.9
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 2.3e-198 695.7 437 74.4
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 8.8e-198 693.7 442 74.9
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 1.1e-197 693.3 435 74.3
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.1e-197 693.3 441 74.6
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.5e-197 693.0 438 74.7
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 1.5e-197 693.0 438 74.2
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 2.0e-197 692.6 433 74.6
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 4.4e-197 691.4 451 72.7
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 5.7e-197 691.0 426 76.1
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 9.7e-197 690.3 434 74.2
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 1.3e-196 689.9 443 74.0
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.7e-196 689.5 444 73.6
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 2.2e-196 689.1 435 74.7
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 2.8e-196 688.7 436 75.7
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 6.3e-196 687.6 450 72.7
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 8.2e-196 687.2 451 72.7
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 8.2e-196 687.2 445 74.2
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.1e-195 686.8 449 72.8
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.4e-195 686.4 435 73.8
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 2.4e-195 685.6 436 74.3
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 2.4e-195 685.6 436 74.3
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 3.1e-195 685.3 433 74.8
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 5.3e-195 684.5 450 72.7
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 7.0e-195 684.1 450 72.4
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 1.2e-194 683.3 436 74.3
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 1.2e-194 683.3 439 73.3
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.2e-194 683.3 431 74.9
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 1.0e-193 680.2 436 73.9
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.7e-193 679.5 422 75.4
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.7e-193 679.5 451 72.5
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 5.0e-193 677.9 436 72.9
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 6.5e-193 677.6 474 69.2
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 4.2e-192 674.9 426 71.1
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 1.2e-191 673.3 432 74.5
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 6.1e-191 671.0 366 82.8
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 1.4e-190 669.8 366 82.8
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 4.8e-188 661.4 428 71.3
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 2.0e-186 656.0 385 77.7
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 9.7e-181 637.1 442 69.0
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 1.2e-178 630.2 424 69.8
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 2.7e-178 629.0 346 83.2
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 8.0e-175 617.5 322 86.0
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 8.8e-174 614.0 460 64.1
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 1.7e-172 609.8 322 84.8
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 3.1e-163 578.9 405 68.1
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 9.5e-160 567.4 338 79.6
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.6e-159 566.6 336 73.5
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.8e-159 565.8 290 86.6
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 8.9e-158 560.8 290 85.5
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 3.4e-157 558.9 289 85.8
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.6e-154 550.1 388 70.9
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 5.8e-149 531.6 287 82.6
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 8.6e-145 517.7 266 87.2
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-142 510.8 334 66.2
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.4e-126 457.2 294 72.4
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 6.9e-126 454.9 300 73.7
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 2.1e-122 443.4 371 53.6
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 2.5e-120 436.4 285 67.0
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 4.0e-118 429.1 313 67.7
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-107 394.4 336 51.8
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-96 357.8 321 52.3
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.1e-94 351.3 271 66.4
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 6.1e-90 335.5 332 48.5
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 5.3e-70 269.2 138 85.5
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 3.6e-66 256.5 179 67.0
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 1.4e-57 228.0 120 85.0
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.1e-54 216.5 109 87.2
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.2e-53 214.9 119 79.0
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 6.1e-50 202.6 138 64.5
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 1.8e-49 201.1 127 73.2
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.8e-33 147.9 85 78.8
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 5.2e-33 146.4 85 77.6
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 6.6e-28 129.4 101 60.4
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 1.9e-27 127.9 80 70.0
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 9.6e-19 99.0 109 45.0
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 3.8e-15 87.0 52 76.9
QL11p016407 Quercus lobata HOM05D004680 ORTHO05D039099 1.4e-06 58.5 127 38.6


User provided reference genes

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