Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 4.4e-170 601.3 321 100.0
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 1.7e-150 536.2 370 81.4
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 6.2e-148 527.7 328 87.5
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 6.4e-145 517.7 329 86.0
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 1.1e-139 500.4 387 74.4
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 7.6e-138 494.2 333 83.5
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 3.7e-124 448.7 272 84.6
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 2.9e-121 439.1 270 82.6
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 2.3e-118 429.5 277 80.9
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 1.1e-117 427.2 338 69.8
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 1.5e-117 426.8 323 72.4
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 1.5e-117 426.8 324 72.2
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.3e-116 423.7 322 72.0
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 1.3e-116 423.7 313 72.5
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 3.7e-116 422.2 325 72.3
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 3.7e-116 422.2 273 81.3
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 3.7e-116 422.2 329 71.7
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 4.8e-116 421.8 271 80.8
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 5.3e-115 418.3 286 76.6
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 2.6e-114 416.0 314 72.6
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 4.5e-114 415.2 319 71.5
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 5.8e-114 414.8 317 72.9
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 1.0e-113 414.1 311 71.7
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 1.3e-113 413.7 299 73.9
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 1.7e-113 413.3 328 69.2
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 1.7e-113 413.3 317 69.4
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 4.9e-113 411.8 264 81.1
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 1.1e-112 410.6 307 72.0
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 1.1e-112 410.6 304 71.7
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 1.1e-112 410.6 314 71.7
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 1.4e-112 410.2 308 73.1
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 1.9e-112 409.8 326 70.2
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 2.5e-112 409.5 311 69.8
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 2.5e-112 409.5 258 82.6
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 4.2e-112 408.7 266 80.5
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 4.2e-112 408.7 307 71.7
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 4.2e-112 408.7 322 70.8
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 5.5e-112 408.3 322 69.9
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 7.1e-112 407.9 282 77.3
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 7.1e-112 407.9 325 69.2
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 7.1e-112 407.9 323 69.7
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.2e-111 407.1 308 71.1
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 1.2e-111 407.1 310 69.7
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 1.2e-111 407.1 318 70.4
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 1.6e-111 406.8 308 69.5
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 2.7e-111 406.0 321 68.2
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 3.5e-111 405.6 320 69.1
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 1.0e-110 404.1 317 70.7
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 1.0e-110 404.1 270 77.0
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 2.3e-110 402.9 329 68.1
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 2.3e-110 402.9 292 75.7
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 2.3e-110 402.9 315 69.5
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 3.0e-110 402.5 257 79.8
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 3.9e-110 402.1 263 80.2
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 3.9e-110 402.1 260 81.2
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 5.1e-110 401.7 292 73.6
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 6.7e-110 401.4 313 71.6
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 6.7e-110 401.4 253 80.6
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 8.7e-110 401.0 285 74.4
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 8.7e-110 401.0 321 68.2
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 1.1e-109 400.6 261 78.2
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 3.3e-109 399.1 263 77.9
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 4.3e-109 398.7 307 71.3
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 1.3e-108 397.1 319 67.4
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 1.3e-108 397.1 266 78.2
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 4.8e-108 395.2 315 69.5
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 8.2e-108 394.4 321 67.3
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 1.1e-107 394.0 292 71.6
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 1.1e-107 394.0 321 67.9
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 1.4e-107 393.7 301 69.4
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 3.1e-107 392.5 321 67.6
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 6.9e-107 391.3 325 65.2
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 9.0e-107 391.0 266 75.9
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 1.2e-106 390.6 324 67.6
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 1.5e-106 390.2 328 65.5
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 2.0e-106 389.8 266 75.2
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 2.6e-106 389.4 266 75.9
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 3.4e-106 389.0 323 67.2
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 4.5e-106 388.7 316 67.7
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 5.9e-106 388.3 266 74.8
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 2.9e-105 386.0 266 74.4
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 2.9e-105 386.0 306 69.0
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 5.0e-105 385.2 335 64.2
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 8.5e-105 384.4 266 74.1
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 1.4e-104 383.6 318 67.6
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 3.2e-104 382.5 265 75.1
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 7.2e-104 381.3 268 73.1
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 7.9e-103 377.9 276 71.7
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 1.1e-101 374.0 273 72.2
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 2.5e-101 372.9 293 70.0
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 7.4e-101 371.3 292 69.2
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 1.7e-100 370.2 383 58.0
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 6.9e-99 364.8 253 72.7
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 1.5e-98 363.6 309 63.4
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 4.2e-96 355.5 248 73.0
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 2.1e-95 353.2 225 80.0
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 2.1e-95 353.2 225 80.0
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 5.1e-94 348.6 242 76.9
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 3.7e-92 342.4 257 66.1
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 4.5e-90 335.5 233 72.1
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 2.5e-88 329.7 478 45.6
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 8.0e-87 324.7 182 94.0
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 7.4e-85 318.2 258 70.9
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 2.8e-84 316.2 222 74.8
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 1.0e-81 307.8 246 68.7
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 1.3e-81 307.4 257 57.6
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 6.5e-81 305.1 251 69.3
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 1.2e-79 300.8 221 72.4
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 6.8e-78 295.0 257 58.8
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 1.5e-77 293.9 245 61.2
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 5.7e-77 292.0 254 58.7
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 2.9e-73 279.6 293 56.3
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 5.0e-73 278.9 247 54.3
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 5.5e-72 275.4 249 56.6
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 1.8e-70 270.4 299 52.5
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 1.5e-64 250.8 186 74.2
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 5.4e-59 232.3 171 74.9
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 2.3e-54 216.9 237 50.6
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 2.3e-54 216.9 208 58.2
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 5.2e-54 215.7 177 64.4
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 1.5e-53 214.2 254 48.4
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 9.2e-51 204.9 256 47.3
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 1.2e-47 194.5 209 55.5
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 1.3e-44 184.5 267 42.7
Medtr7g055620 Medicago truncatula HOM05D005699 ORTHO05D007496 7.1e-27 125.6 87 75.9
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 3.1e-22 110.2 125 53.6
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 1.2e-21 108.2 117 53.0
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 3.8e-20 103.2 72 69.4
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 7.3e-16 89.0 57 80.7
SEGI_06384 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 7.3e-16 89.0 63 66.7
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 8.1e-15 85.5 53 83.0
FvH4_7g00710 Fragaria vesca HOM05D005699 ORTHO05D046157 1.0e-09 68.6 48 62.5
FAN06G4357 Fragaria x ananassa HOM05D023873 ORTHO05D007496 1.5e-08 64.7 40 70.0
FAN10G4235 Fragaria x ananassa HOM05D030717 ORTHO05D046157 1.5e-08 64.7 71 47.9
Actinidia39422 Actinidia chinensis HOM05D005699 ORTHO05D056065 1.3e-07 61.6 42 69.0
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.1e-06 58.5 210 29.0
BcaB02g07173 Brassica carinata HOM05D005699 ORTHO05D091938 1.8e-06 57.8 87 44.8


User provided reference genes

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