Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 0.0e+00 1336.2 675 100.0
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 0.0e+00 1182.9 682 89.7
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 1.4e-290 1002.7 680 77.9
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 9.9e-289 996.5 680 77.6
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.1e-287 993.0 680 77.2
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 4.9e-280 967.6 676 75.3
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 9.1e-226 787.3 653 68.3
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 2.5e-223 779.2 688 60.8
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 4.4e-220 768.5 677 61.3
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 3.7e-219 765.4 680 61.3
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 1.0e-213 747.3 615 62.8
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 2.0e-209 733.0 679 59.2
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.0e-208 730.7 678 57.7
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.3e-208 730.3 680 58.1
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 3.8e-208 728.8 644 60.2
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 5.0e-208 728.4 673 58.2
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 8.6e-208 727.6 680 57.8
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.9e-207 726.5 677 57.8
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 2.5e-207 726.1 647 60.9
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 1.2e-206 723.8 683 57.2
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.4e-205 720.3 676 57.1
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 5.2e-205 718.4 679 56.4
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.4e-202 710.3 680 58.5
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 9.2e-202 707.6 670 56.7
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 1.6e-201 706.8 673 55.9
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 3.3e-199 699.1 672 57.0
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 7.3e-199 698.0 679 56.0
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.4e-197 693.7 692 55.5
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 2.3e-197 693.0 679 55.4
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.0e-196 689.9 675 55.6
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 5.8e-196 688.3 677 54.4
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.7e-195 686.8 680 54.3
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 8.3e-195 684.5 691 53.0
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 8.3e-195 684.5 679 55.7
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 1.1e-194 684.1 677 54.7
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 4.1e-194 682.2 673 55.6
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 9.2e-194 681.0 691 54.3
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 2.0e-193 679.9 679 54.5
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 6.0e-193 678.3 688 53.2
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 1.0e-192 677.6 679 53.5
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.7e-192 676.8 681 53.6
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.0e-192 676.0 679 54.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.5e-191 673.7 677 53.9
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 5.6e-191 671.8 670 54.5
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 9.5e-191 671.0 643 56.5
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 1.2e-190 670.6 683 53.1
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 3.6e-190 669.1 672 53.9
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 1.8e-189 666.8 683 54.5
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 1.8e-189 666.8 671 53.8
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 2.3e-189 666.4 670 54.3
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 6.8e-189 664.8 669 55.2
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 6.8e-189 664.8 681 54.6
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 1.5e-188 663.7 681 54.9
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 2.0e-188 663.3 681 54.9
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 3.4e-188 662.5 599 58.9
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 1.3e-187 660.6 653 56.2
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.7e-187 659.1 651 53.8
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 4.9e-187 658.7 679 54.9
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 4.9e-187 658.7 681 54.5
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 8.3e-187 657.9 680 52.8
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 8.3e-187 657.9 674 52.8
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 1.1e-186 657.5 602 58.5
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 1.9e-186 656.8 675 54.8
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 5.4e-186 655.2 671 53.1
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 9.2e-186 654.4 673 54.4
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.6e-185 653.7 681 54.5
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 1.9e-183 646.7 647 55.3
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 1.6e-182 643.7 608 56.7
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 6.2e-182 641.7 611 56.5
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.1e-181 641.0 577 61.2
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 1.4e-178 630.6 681 52.7
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.1e-177 626.7 669 51.7
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 6.0e-177 625.2 677 51.7
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 6.6e-176 621.7 726 49.4
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 5.6e-175 618.6 678 51.8
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 1.2e-174 617.5 682 51.8
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 2.1e-174 616.7 668 51.2
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 4.7e-174 615.5 679 51.7
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 8.1e-174 614.8 677 51.8
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 2.4e-173 613.2 655 52.2
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 3.1e-173 612.8 672 50.4
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 3.1e-173 612.8 668 51.5
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 8.9e-173 611.3 662 53.0
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 2.9e-171 606.3 677 51.1
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.9e-170 603.6 650 52.0
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 4.2e-170 602.4 593 54.5
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 5.4e-170 602.1 675 51.3
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 9.3e-170 601.3 675 51.1
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 9.3e-170 601.3 675 51.1
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 3.5e-169 599.4 683 50.4
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 9.6e-167 591.3 673 50.8
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-166 590.5 655 48.7
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.1e-166 590.1 671 51.6
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 8.4e-163 578.2 684 51.9
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 2.4e-162 576.6 685 48.8
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 3.5e-161 572.8 676 47.6
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 6.7e-160 568.5 653 49.6
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 4.3e-159 565.8 670 47.5
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 5.6e-159 565.5 571 56.2
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 4.8e-158 562.4 653 48.2
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 1.7e-155 553.9 670 47.5
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 2.2e-155 553.5 669 47.7
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 6.0e-153 545.4 589 51.8
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 7.9e-153 545.0 474 60.3
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 7.4e-151 538.5 512 55.1
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 1.4e-149 534.3 603 51.2
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 3.0e-144 516.5 475 57.7
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.5e-143 514.2 671 45.6
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.5e-139 498.8 643 44.3
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 1.8e-136 490.7 571 50.1
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 1.2e-132 478.0 414 60.4
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 9.1e-109 398.7 679 38.0
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 6.1e-105 386.0 552 41.8
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 2.8e-97 360.5 681 34.9
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 3.8e-91 340.1 589 37.0
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 3.3e-90 337.0 638 34.3
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.6e-89 333.6 380 47.4
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 4.7e-81 306.6 370 46.2
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 4.7e-81 306.6 282 54.6
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-80 305.1 390 44.4
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 1.0e-67 262.3 270 50.4
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 3.6e-57 227.3 213 55.4
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-53 215.3 332 40.7
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 9.3e-53 212.6 302 42.7
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 1.0e-51 209.1 462 30.7
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-44 185.3 226 48.2
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 1.7e-30 138.7 263 34.6
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 2.5e-29 134.8 227 40.1
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-21 109.0 209 36.8
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 5.5e-21 107.1 176 35.8
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 1.3e-17 95.9 125 48.8
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 4.8e-17 94.0 250 35.6
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.1e-13 82.8 88 54.5
TPR.G39542 Trifolium pratense HOM05D005553 ORTHO05D006866 2.6e-10 71.6 88 44.3
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 4.8e-09 67.4 59 52.5
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 5.3e-08 63.9 427 21.1


User provided reference genes

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