Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 1.0e-51 206.5 106 100.0
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 2.0e-50 202.2 105 98.1
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 7.5e-50 200.3 106 96.2
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 5.5e-45 184.1 106 86.8
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 3.0e-43 178.3 106 84.9
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 1.5e-42 176.0 106 84.0
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 2.8e-41 171.8 106 79.2
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.1e-40 169.9 106 78.3
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.1e-40 169.9 106 79.2
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 5.4e-40 167.5 106 78.3
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 5.4e-40 167.5 106 79.2
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 7.0e-40 167.2 106 78.3
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 9.2e-40 166.8 105 79.0
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 2.7e-39 165.2 105 79.0
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 7.8e-39 163.7 106 76.4
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 1.3e-38 162.9 107 77.6
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.9e-38 161.8 105 76.2
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 2.9e-38 161.8 106 76.4
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 2.9e-38 161.8 105 74.3
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 5.0e-38 161.0 106 75.5
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 8.6e-38 160.2 100 81.0
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 1.1e-37 159.8 107 77.6
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 1.1e-37 159.8 106 76.4
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 1.9e-37 159.1 106 77.4
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 2.5e-37 158.7 106 76.4
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 2.5e-37 158.7 106 74.5
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 3.3e-37 158.3 106 79.2
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 3.3e-37 158.3 106 74.5
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 3.3e-37 158.3 106 73.6
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 9.5e-37 156.8 108 75.9
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 1.2e-36 156.4 106 73.6
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 1.2e-36 156.4 106 74.5
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 1.6e-36 156.0 108 75.9
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 1.6e-36 156.0 104 75.0
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 1.6e-36 156.0 106 74.5
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 1.6e-36 156.0 108 75.9
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 3.6e-36 154.8 106 73.6
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 6.1e-36 154.1 97 79.4
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 8.0e-36 153.7 104 73.1
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.4e-35 152.9 106 73.6
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.4e-35 152.9 106 73.6
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 1.8e-35 152.5 104 72.1
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 3.0e-35 151.8 104 73.1
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 4.0e-35 151.4 102 75.5
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 5.2e-35 151.0 106 69.8
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 5.2e-35 151.0 106 72.6
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 6.8e-35 150.6 104 71.2
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 8.9e-35 150.2 106 71.7
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 1.5e-34 149.4 104 70.2
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 1.7e-33 146.0 106 65.1
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 2.9e-33 145.2 104 69.2
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 1.8e-32 142.5 104 71.2
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 3.2e-32 141.7 105 64.8
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 5.4e-32 141.0 95 74.7
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 2.0e-31 139.0 108 66.7
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 1.0e-30 136.7 106 67.0
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 3.9e-30 134.8 104 66.3
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 6.6e-30 134.0 96 75.0
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 6.6e-30 134.0 106 68.9
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 7.3e-29 130.6 104 65.4
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 1.1e-24 116.7 112 59.8
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 3.3e-21 105.1 103 53.4
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 1.2e-20 103.2 106 54.7
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 4.7e-20 101.3 82 62.2
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 6.2e-20 100.9 107 53.3
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 1.4e-19 99.8 106 52.8
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 1.8e-19 99.4 106 44.3
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 6.8e-19 97.4 107 52.3
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 2.2e-17 92.4 82 57.3
PGR044G2297 Punica granatum HOM05D008087 ORTHO05D010187 2.1e-15 85.9 89 52.8
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 4.6e-15 84.7 114 45.6
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 8.6e-14 80.5 106 46.2
Zm00001eb005810 Zea mays HOM05D008087 ORTHO05D010187 1.2e-07 60.1 106 39.6
SMO358G0701 Selaginella moellendorffii HOM05D016812 ORTHO05D010187 3.5e-07 58.5 99 36.4


User provided reference genes

Program Settings