Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.8e-230 800.8 406 100.0
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.2e-214 748.8 401 94.3
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.4e-212 741.5 407 93.4
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.9e-211 738.4 407 93.1
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.5e-178 629.8 407 80.6
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 3.3e-178 628.6 407 80.8
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 2.8e-169 599.0 408 77.7
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 7.5e-167 590.9 350 84.3
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 4.6e-132 475.3 409 62.6
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 2.1e-129 466.5 324 71.0
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.4e-127 459.1 408 60.0
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.1e-122 444.1 406 58.1
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.9e-122 443.4 407 58.5
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.3e-122 442.2 341 65.4
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 3.7e-121 439.1 409 58.9
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 8.2e-121 438.0 325 66.2
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 1.1e-120 437.6 414 58.0
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 4.5e-119 432.2 410 55.6
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.9e-117 426.8 415 55.9
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 4.6e-116 422.2 328 61.9
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 4.6e-116 422.2 343 63.0
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.0e-115 421.0 344 59.3
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.8e-115 420.2 321 63.6
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.3e-115 419.9 406 56.4
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 5.1e-115 418.7 319 64.3
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 8.7e-115 417.9 393 53.7
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 1.1e-114 417.5 406 54.9
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.1e-114 417.5 324 65.4
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 2.5e-114 416.4 318 61.6
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 4.3e-114 415.6 414 54.6
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 4.3e-114 415.6 357 59.4
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 5.7e-114 415.2 324 65.1
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 2.8e-113 412.9 413 53.3
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 2.8e-113 412.9 328 61.0
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 8.2e-113 411.4 325 63.1
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 1.1e-112 411.0 403 55.3
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.1e-112 411.0 332 63.9
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 1.1e-112 411.0 319 63.0
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 1.4e-112 410.6 415 52.8
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 1.4e-112 410.6 321 62.0
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 4.1e-112 409.1 322 61.8
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 6.9e-112 408.3 321 60.7
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 1.5e-111 407.1 306 62.7
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.0e-111 406.8 410 52.4
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.6e-111 406.4 411 53.8
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 4.5e-111 405.6 360 58.3
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 1.0e-110 404.4 304 62.8
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.3e-110 404.1 415 52.5
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.3e-110 404.1 407 52.1
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 1.1e-109 401.0 343 59.5
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 1.1e-109 401.0 395 54.2
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.9e-109 400.2 350 60.6
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.9e-109 400.2 316 60.4
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 4.2e-109 399.1 401 52.1
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 4.2e-109 399.1 332 58.4
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.2e-108 397.5 320 60.6
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.6e-108 397.1 411 53.3
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 2.1e-108 396.7 372 55.9
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 6.7e-107 391.7 349 54.2
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 3.3e-106 389.4 389 51.7
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 5.7e-106 388.7 406 51.0
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 3.7e-105 386.0 322 56.8
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 4.8e-105 385.6 418 49.5
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 6.3e-105 385.2 324 55.6
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 8.2e-105 384.8 364 51.9
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 1.1e-104 384.4 324 55.2
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 1.4e-104 384.0 324 55.2
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 1.4e-104 384.0 324 55.2
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.8e-104 383.6 411 50.6
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 3.1e-104 382.9 362 54.4
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 3.1e-104 382.9 377 52.8
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.1e-104 382.5 324 54.9
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 5.3e-104 382.1 324 55.2
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 6.9e-104 381.7 327 54.4
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 6.9e-104 381.7 393 53.9
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 1.5e-103 380.6 410 50.7
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 2.0e-103 380.2 302 60.3
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.3e-102 377.5 322 55.3
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 2.2e-102 376.7 404 48.3
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 2.2e-102 376.7 336 60.7
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.1e-101 374.4 407 47.7
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 5.5e-101 372.1 414 49.5
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 7.2e-101 371.7 473 48.2
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 9.4e-101 371.3 364 49.5
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.4e-101 371.3 369 49.3
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 2.7e-100 369.8 400 51.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 6.1e-100 368.6 400 50.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.0e-99 367.9 403 49.9
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.8e-99 367.1 332 53.0
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 2.3e-99 366.7 311 56.6
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 9.7e-98 361.3 320 55.6
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.8e-97 359.8 336 57.4
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.7e-97 359.4 332 56.6
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 5.3e-96 355.5 318 54.7
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.2e-95 354.4 368 47.6
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 3.5e-95 352.8 322 53.7
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.0e-94 351.3 314 60.8
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 3.8e-94 349.4 316 54.7
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.2e-92 344.4 396 48.5
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 4.7e-92 342.4 414 48.1
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.3e-89 334.3 393 48.6
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.1e-88 328.2 313 52.4
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 8.5e-86 321.6 321 48.9
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 5.2e-83 312.4 271 60.1
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 2.1e-76 290.4 337 46.3
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 8.8e-75 285.0 226 59.7
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 8.8e-75 285.0 257 56.0
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.2e-71 274.6 230 56.5
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 6.6e-70 268.9 207 62.3
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 1.9e-69 267.3 283 52.3
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 6.8e-67 258.8 291 49.8
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.7e-65 253.1 354 44.6
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 1.1e-64 251.5 367 42.8
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 1.3e-62 244.6 326 43.6
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 2.1e-47 194.1 227 48.0
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 9.5e-45 185.3 249 41.8
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 1.5e-42 177.9 153 66.7
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.5e-39 166.8 133 60.2
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 6.2e-36 156.0 150 49.3
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.6e-34 150.6 314 29.0
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 1.3e-33 148.3 179 40.2
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 2.9e-33 147.1 119 58.0
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.9e-32 144.4 357 28.6
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 1.5e-29 134.8 111 64.9
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 3.1e-27 127.1 194 39.7
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 9.0e-27 125.6 150 40.7
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 1.7e-25 121.3 76 72.4
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 2.9e-25 120.6 235 32.8
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 3.5e-23 113.6 91 60.4
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 4.6e-23 113.2 317 25.6
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.1e-22 109.8 69 69.6
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 2.4e-19 100.9 251 26.7
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 5.3e-19 99.8 143 43.4
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 9.9e-18 95.5 90 50.0
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-16 91.7 93 47.3
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 4.2e-16 90.1 314 24.5
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 7.6e-10 69.3 62 61.3
Hund28065 Selenicereus undatus HOM05D000003 ORTHO05D000006 7.9e-07 59.3 114 34.2
Hund28074 Selenicereus undatus HOM05D000003 ORTHO05D000006 7.9e-07 59.3 114 34.2


User provided reference genes

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