Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.2e-123 445.7 230 100.0
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 5.7e-79 298.1 175 89.1
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 6.1e-73 278.1 170 82.4
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.4e-72 276.9 173 80.9
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 1.5e-71 273.5 162 84.0
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 2.6e-71 272.7 162 84.0
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.2e-70 269.6 160 83.8
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 6.3e-70 268.1 160 83.8
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-69 266.9 194 70.6
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 2.4e-69 266.2 162 80.2
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 2.4e-69 266.2 161 80.7
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 5.4e-69 265.0 162 80.9
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 7.0e-69 264.6 175 74.3
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 9.1e-69 264.2 160 81.9
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.1e-69 264.2 162 79.6
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 9.1e-69 264.2 161 80.7
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.6e-68 263.5 161 80.1
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.6e-68 263.5 166 77.7
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 2.0e-68 263.1 170 78.2
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 2.0e-68 263.1 161 80.1
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 3.5e-68 262.3 161 78.9
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 4.5e-68 261.9 175 76.0
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 4.5e-68 261.9 161 79.5
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 5.9e-68 261.5 211 64.9
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 5.9e-68 261.5 162 79.0
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 5.9e-68 261.5 162 81.5
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 7.7e-68 261.2 162 79.0
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 1.3e-67 260.4 208 66.3
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.7e-67 260.0 162 79.0
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.7e-67 260.0 161 80.1
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 1.7e-67 260.0 208 65.9
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.7e-67 260.0 161 79.5
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 2.3e-67 259.6 161 79.5
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 2.3e-67 259.6 162 79.0
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 2.9e-67 259.2 162 78.4
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 2.9e-67 259.2 158 79.7
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 3.8e-67 258.8 175 72.0
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 3.8e-67 258.8 175 74.3
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 5.0e-67 258.5 162 77.8
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 6.6e-67 258.1 227 61.2
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 6.6e-67 258.1 175 73.7
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 8.6e-67 257.7 208 64.9
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 8.6e-67 257.7 208 64.9
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 1.1e-66 257.3 162 77.8
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.1e-66 257.3 170 75.3
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 1.1e-66 257.3 200 65.0
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 1.9e-66 256.5 162 77.8
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.9e-66 256.5 162 78.4
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 2.5e-66 256.1 161 77.6
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 3.3e-66 255.8 170 72.9
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 4.2e-66 255.4 164 73.8
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 5.5e-66 255.0 158 79.1
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 7.2e-66 254.6 162 75.3
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 9.5e-66 254.2 175 70.3
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.2e-65 253.8 162 75.9
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 1.2e-65 253.8 221 63.3
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.6e-65 253.4 161 79.5
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 2.1e-65 253.1 156 78.2
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 2.1e-65 253.1 175 69.7
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 2.1e-65 253.1 162 74.1
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 3.6e-65 252.3 225 59.1
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 3.6e-65 252.3 173 73.4
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 4.7e-65 251.9 162 76.5
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 4.7e-65 251.9 162 75.9
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 6.1e-65 251.5 158 76.6
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 6.1e-65 251.5 170 72.4
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 8.0e-65 251.1 216 60.6
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.0e-64 250.8 161 77.6
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.8e-64 250.0 170 72.4
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 2.3e-64 249.6 173 71.1
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.3e-64 249.6 175 69.1
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 5.2e-64 248.4 161 73.3
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.2e-64 248.4 215 63.3
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 6.8e-64 248.1 173 68.8
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 8.9e-64 247.7 208 61.1
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.2e-63 247.3 175 69.7
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 2.0e-63 246.5 168 70.2
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 2.6e-63 246.1 173 70.5
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 3.4e-63 245.7 172 69.8
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 3.4e-63 245.7 208 62.5
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 3.4e-63 245.7 158 73.4
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 1.3e-62 243.8 166 72.9
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 1.3e-62 243.8 175 66.9
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.7e-62 243.4 175 66.9
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 3.7e-62 242.3 220 59.5
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 3.7e-62 242.3 153 77.1
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 3.7e-62 242.3 228 57.9
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 4.9e-62 241.9 153 77.1
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 4.9e-62 241.9 158 71.5
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 4.9e-62 241.9 157 73.9
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 4.9e-62 241.9 173 69.9
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 8.3e-62 241.1 210 61.9
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.1e-61 240.7 175 66.9
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.1e-61 240.7 180 67.2
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 1.1e-61 240.7 201 61.2
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 1.4e-61 240.4 175 69.1
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 2.4e-61 239.6 222 58.1
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 3.1e-61 239.2 170 69.4
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.1e-61 238.8 170 70.0
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 5.4e-61 238.4 211 58.8
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.4e-61 238.4 222 59.5
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 7.0e-61 238.0 211 58.3
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 9.2e-61 237.7 211 58.3
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 9.2e-61 237.7 211 58.3
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 1.6e-60 236.9 211 58.3
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.7e-60 236.1 228 58.8
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.7e-60 236.1 192 63.0
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 2.7e-60 236.1 174 68.4
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 4.5e-60 235.3 211 57.8
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 4.5e-60 235.3 211 57.8
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 4.5e-60 235.3 211 57.8
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 5.9e-60 235.0 149 73.8
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 7.8e-60 234.6 162 67.3
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.0e-59 234.2 211 57.8
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 1.0e-59 234.2 190 62.1
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.3e-59 233.8 211 57.3
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.7e-59 233.4 211 58.8
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 2.3e-59 233.0 211 56.9
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 2.9e-59 232.6 163 69.3
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 3.9e-59 232.3 211 58.3
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 3.9e-59 232.3 211 56.9
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 3.9e-59 232.3 211 58.8
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 5.0e-59 231.9 159 69.8
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 5.0e-59 231.9 162 72.2
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 5.0e-59 231.9 175 64.0
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 6.6e-59 231.5 211 58.3
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 8.6e-59 231.1 211 57.8
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.1e-58 230.7 163 71.2
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 2.5e-58 229.6 201 59.7
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 5.6e-58 228.4 228 53.9
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 6.1e-57 224.9 195 62.1
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.3e-56 223.0 179 63.1
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.3e-56 223.0 192 61.5
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.1e-56 222.6 258 51.9
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 4.0e-56 222.2 198 56.6
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 8.9e-56 221.1 211 55.5
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.5e-55 220.3 242 52.1
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 4.4e-55 218.8 180 63.9
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 5.8e-55 218.4 179 62.0
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 5.8e-55 218.4 180 63.9
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.2e-54 216.5 141 73.8
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 4.9e-54 215.3 202 57.4
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.4e-53 213.0 150 70.0
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 4.1e-53 212.2 174 63.2
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 5.4e-53 211.8 170 65.9
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 1.2e-52 210.7 202 55.0
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 2.0e-52 209.9 227 57.3
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 5.6e-50 201.8 162 63.0
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 7.3e-50 201.4 182 59.3
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 1.4e-48 197.2 158 58.9
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 4.1e-45 185.7 156 53.2
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 6.6e-43 178.3 172 57.6
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.9e-38 162.9 87 96.6
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.1e-37 161.0 121 65.3
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 8.6e-35 151.4 143 55.2
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 4.7e-33 145.6 108 65.7
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 3.2e-29 132.9 98 70.4
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 4.2e-29 132.5 88 75.0
Potri.004G157900 Populus trichocarpa HOM05D000626 ORTHO05D003868 4.2e-29 132.5 120 57.5
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.9e-26 123.6 95 64.2
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 1.1e-21 107.8 97 53.6
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 1.4e-21 107.5 144 40.3
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 2.7e-20 103.2 180 41.7
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 6.0e-20 102.1 87 64.4
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.0e-19 101.3 104 53.8
HanXRQChr05g0134001 Helianthus annuus HOM05D000626 ORTHO05D003868 2.5e-18 96.7 62 79.0
HPP92_010240 Vanilla planifolia HOM05D000626 ORTHO05D003868 1.5e-15 87.4 59 71.2
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 3.4e-15 86.3 87 57.5
QL11p042736 Quercus lobata HOM05D000626 ORTHO05D003868 3.0e-11 73.2 68 55.9
Cpa.g.sc43.144 Carica papaya HOM05D000626 ORTHO05D003868 2.5e-10 70.1 52 61.5
Potri.009G112922 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.3e-10 69.7 52 65.4
Potri.T125804 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.3e-10 69.7 52 65.4
Cfa019187 Carpinus fangiana HOM05D003289 ORTHO05D034141 4.3e-10 69.3 46 76.1
Hma1.2p1_0829F.1_g225220 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 4.5e-07 59.3 51 58.8


User provided reference genes

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