Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.4e-281 970.7 509 100.0
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.1e-279 966.1 509 99.0
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 2.4e-271 938.3 510 96.1
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 6.6e-269 930.2 510 94.7
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 1.2e-267 926.0 510 94.1
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 1.6e-267 925.6 510 94.1
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 1.1e-260 902.9 510 91.6
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.9e-260 902.1 509 90.2
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.6e-259 899.0 510 90.4
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 4.0e-258 894.4 509 90.4
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 8.9e-258 893.3 510 90.4
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 89.8
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 90.2
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 1.5e-257 892.5 509 89.6
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.5e-257 892.5 510 90.4
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 9.8e-257 889.8 510 90.2
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 9.8e-257 889.8 509 89.0
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.3e-256 889.4 509 89.8
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 2.9e-256 888.3 510 90.4
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.9e-256 888.3 510 90.0
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 4.9e-256 887.5 511 89.8
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.4e-256 887.1 512 90.4
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 8.3e-256 886.7 510 89.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 8.3e-256 886.7 510 89.2
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 4.1e-255 884.4 511 89.4
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 90.0
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.2e-254 882.9 511 89.4
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.6e-254 882.5 509 88.8
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 2.7e-254 881.7 510 88.6
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 3.5e-254 881.3 511 89.2
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 4.6e-254 880.9 511 89.0
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 89.2
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 1.3e-253 879.4 510 89.2
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 2.3e-253 878.6 511 88.8
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 3.0e-253 878.2 511 88.1
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 3.9e-253 877.9 509 88.4
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.5e-252 875.9 510 88.2
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.5e-252 875.9 510 88.6
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.9e-252 875.5 511 88.3
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 87.3
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.5e-252 875.2 510 88.0
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 4.3e-252 874.4 510 88.6
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.0
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.8
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.0
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 5.6e-252 874.0 509 87.8
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.0
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.6e-251 872.5 509 87.0
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.6e-251 872.5 511 87.5
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 87.6
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 2.8e-251 871.7 510 88.8
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 88.0
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 8.1e-251 870.2 511 87.9
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.1e-250 869.8 510 87.6
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 87.5
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 2.3e-250 868.6 509 86.4
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.3e-250 868.6 509 86.4
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.3e-250 868.6 509 86.4
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 3.1e-250 868.2 509 88.0
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 4.0e-250 867.8 510 87.5
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 87.3
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 6.8e-250 867.1 510 87.1
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 6.8e-250 867.1 509 86.4
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 86.9
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.2e-249 866.3 510 87.3
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.6e-249 865.1 526 85.6
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 87.1
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 5.8e-249 864.0 510 87.3
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 5.8e-249 864.0 509 86.1
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 7.5e-249 863.6 510 87.1
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 86.7
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 86.1
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 86.7
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 86.7
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 2.2e-248 862.1 509 86.8
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 2.9e-248 861.7 510 86.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.9e-248 861.7 502 88.6
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 3.7e-248 861.3 510 87.1
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 6.4e-248 860.5 510 86.5
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.4e-247 859.4 509 86.2
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.4e-247 859.4 510 86.3
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.9e-247 859.0 509 86.4
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 2.4e-247 858.6 510 86.5
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 3.2e-247 858.2 510 86.7
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.2e-246 856.3 510 86.1
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 2.1e-246 855.5 549 82.1
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 2.7e-246 855.1 509 86.4
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 85.7
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 85.7
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 6.0e-246 854.0 509 86.1
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 3.0e-245 851.7 511 86.5
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 5.1e-245 850.9 509 89.0
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 3.3e-244 848.2 510 85.1
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 3.3e-244 848.2 511 85.9
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.2e-243 846.3 511 85.7
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 84.9
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 84.9
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 2.8e-243 845.1 512 86.5
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 4.7e-243 844.3 510 84.7
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 84.3
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 8.9e-242 840.1 509 83.5
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.0e-241 839.0 493 86.6
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.6e-241 838.6 510 83.9
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 7.6e-241 837.0 524 83.2
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 8.4e-240 833.6 510 83.9
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.2e-239 831.6 512 84.8
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 4.1e-239 831.2 505 86.1
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 3.9e-237 824.7 494 87.4
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.5e-236 822.8 547 79.2
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 4.3e-236 821.2 494 85.4
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 4.3e-236 821.2 510 82.9
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 510 82.7
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 5.6e-236 820.8 510 82.7
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.6e-235 819.3 510 82.5
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 2.1e-235 818.9 492 84.6
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 2.1e-235 818.9 511 82.2
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 1.2e-233 813.1 494 84.4
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.5e-233 812.8 472 89.0
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 4.4e-233 811.2 493 84.6
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 3.5e-230 801.6 511 81.4
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 7.8e-230 800.4 556 77.3
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 6.6e-229 797.3 510 79.0
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 6.9e-226 787.3 511 80.4
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 3.4e-225 785.0 512 81.4
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 5.8e-225 784.3 510 78.2
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.4e-223 779.6 524 78.8
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.4e-223 779.6 524 78.8
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.4e-223 778.9 509 79.2
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 4.0e-210 734.9 440 85.2
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 2.5e-204 715.7 511 75.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 3.7e-203 711.8 472 80.9
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.0e-200 703.7 413 87.7
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 5.5e-199 698.0 503 74.4
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.7e-198 695.7 510 74.1
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 1.9e-191 672.9 514 65.6
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.4e-186 656.8 503 67.8
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 1.3e-179 633.6 468 72.2
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 2.8e-179 632.5 375 86.4
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.5e-175 620.2 514 60.5
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.2e-172 610.5 364 86.5
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.0e-168 597.4 522 59.6
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 5.0e-168 595.1 364 84.9
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 8.5e-168 594.3 504 67.3
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 2.7e-166 589.3 511 59.1
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.0e-165 587.4 494 60.3
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.2e-164 583.9 379 80.2
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 3.7e-163 578.9 346 86.1
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 7.0e-162 574.7 325 92.6
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.4e-154 549.7 499 54.1
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.5e-153 545.8 456 68.6
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 4.4e-148 528.9 307 89.9
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-142 510.4 284 93.3
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 8.3e-131 471.5 383 62.9
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.6e-120 435.3 254 86.6
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.4e-115 418.7 245 89.4
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 8.4e-115 418.3 513 46.2
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.7e-107 394.0 386 55.4
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 7.9e-105 385.2 486 44.0
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 6.9e-101 372.1 267 74.5
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 4.6e-97 359.4 520 38.3
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 6.5e-83 312.4 199 84.9
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.1e-73 280.8 343 47.5
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 9.1e-69 265.4 502 38.6
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 2.9e-59 233.8 144 84.0
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.5e-58 230.7 288 46.5
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.6e-57 226.9 357 41.5
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 6.1e-49 199.5 117 81.2
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 9.8e-47 192.2 143 75.5
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.3e-46 189.1 206 51.9
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.1e-42 178.7 197 50.8
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 5.9e-36 156.4 106 75.5
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.5e-31 139.4 119 56.3
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.9e-29 134.8 87 82.8
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 5.4e-21 106.7 121 58.7
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.1e-10 72.4 63 58.7
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 4.3e-10 70.5 39 87.2
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 6.2e-09 66.6 37 86.5
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 1.7e-06 58.5 38 76.3


User provided reference genes

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