Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 7.8e-82 307.8 248 100.0
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.8e-46 190.3 254 71.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 6.0e-34 148.7 263 63.1
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.0e-33 147.9 107 78.5
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.3e-33 147.5 263 63.9
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 6.9e-30 135.2 255 52.2
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.2e-26 124.4 259 54.1
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.6e-26 124.0 105 66.7
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.1e-26 123.6 258 55.4
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.3e-24 115.9 98 65.3
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 5.7e-24 115.5 107 65.4
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 7.4e-24 115.2 289 50.9
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.3e-23 114.4 107 62.6
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.2e-23 113.6 98 65.3
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 6.3e-23 112.1 98 63.3
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.8e-22 110.5 253 54.2
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.8e-22 110.5 253 54.2
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.8e-22 110.5 107 57.9
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-21 106.7 94 64.9
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-21 106.7 94 64.9
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-21 106.7 94 63.8
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 7.7e-21 105.1 98 59.2
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.7e-20 104.0 101 58.4
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 3.8e-20 102.8 99 56.6
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 3.8e-20 102.8 99 58.6
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 6.5e-20 102.1 100 57.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.4e-19 100.9 94 61.7
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.4e-19 100.9 88 64.8
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.9e-19 100.5 98 58.2
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.9e-19 100.5 100 58.0
ClCG09G022180 Citrullus lanatus HOM05D016418 ORTHO05D018826 5.5e-19 99.0 94 93.6
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 5.5e-19 99.0 102 54.9
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 5.5e-19 99.0 259 45.6
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 101 55.4
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 7.9e-18 95.1 102 52.9
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.4e-17 94.4 101 52.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.3e-17 93.6 97 56.7
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.3e-17 93.6 107 51.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 3.9e-17 92.8 85 58.8
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 6.7e-17 92.0 107 51.4
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 1.1e-16 91.3 99 55.6
QL03p070946 Quercus lobata HOM05D016418 ORTHO05D018826 1.5e-16 90.9 95 87.4
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 4.3e-16 89.4 98 52.0
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 7.4e-16 88.6 84 56.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 7.4e-16 88.6 99 52.5
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 9.7e-16 88.2 101 47.5
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.7e-15 87.4 106 49.1
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 3.7e-15 86.3 96 53.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 4.8e-15 85.9 107 48.6
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.4e-13 79.7 99 50.5
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 7.7e-13 78.6 94 52.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.7e-13 78.6 98 46.9
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.0e-12 78.2 99 47.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.1e-11 74.7 252 44.4
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.9e-11 73.9 99 46.5
CSS0041468 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 4.2e-11 72.8 43 74.4
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 4.2e-11 72.8 107 43.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 5.5e-11 72.4 107 44.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.2e-10 71.2 99 46.5
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.2e-10 71.2 94 45.7
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 2.1e-10 70.5 88 48.9
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.7e-10 70.1 101 43.6
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.7e-10 70.1 101 43.6
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 2.7e-10 70.1 101 43.6
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 4.7e-10 69.3 38 86.8
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 4.7e-10 69.3 107 45.8
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 6.1e-10 68.9 97 46.4
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 6.1e-10 68.9 46 71.7
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 6.1e-10 68.9 78 56.4
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 7.9e-10 68.6 104 44.2
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 7.9e-10 68.6 104 42.3
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.4e-09 67.8 96 44.8
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.4e-09 67.8 107 46.7
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.3e-09 67.0 99 44.4
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.0e-09 66.6 40 80.0
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 3.0e-09 66.6 79 49.4
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 3.9e-09 66.2 96 44.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 3.9e-09 66.2 86 47.7
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 6.7e-09 65.5 101 40.6
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 6.7e-09 65.5 100 38.0
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 6.7e-09 65.5 79 53.2
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 6.7e-09 65.5 98 43.9
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 8.8e-09 65.1 107 40.2
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 8.8e-09 65.1 104 44.2
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 8.8e-09 65.1 101 45.5
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.5e-08 64.3 98 43.9
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.5e-08 64.3 99 43.4
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.0e-08 63.9 71 53.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 7.4e-08 62.0 92 46.7
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 7.4e-08 62.0 101 41.6
CSS0000772 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 9.7e-08 61.6 44 68.2
CSS0004591 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 9.7e-08 61.6 44 68.2
CSS0005644 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 9.7e-08 61.6 44 68.2
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 9.7e-08 61.6 107 41.1
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-07 61.2 55 54.5
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.3e-07 61.2 107 41.1
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 1.3e-07 61.2 85 45.9
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 2.2e-07 60.5 101 39.6
CSS0042536 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 2.8e-07 60.1 30 90.0
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 3.7e-07 59.7 107 36.4
CSS0022896 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 3.7e-07 59.7 44 65.9
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.7e-07 59.7 107 40.2
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.7e-07 59.7 55 56.4
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 4.8e-07 59.3 107 40.2
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 6.3e-07 58.9 99 41.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 6.3e-07 58.9 99 40.4
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.1e-06 58.2 101 38.6
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.1e-06 58.2 101 40.6
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-06 58.2 107 40.2
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.1e-06 58.2 72 51.4
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.1e-06 58.2 99 39.4
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.4e-06 57.8 76 50.0
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.8e-06 57.4 49 63.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.4e-06 57.0 98 42.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.4e-06 57.0 101 42.6
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 3.1e-06 56.6 107 39.3


User provided reference genes

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