Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.6e-155 552.7 288 100.0
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.2e-144 515.8 309 90.3
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 3.2e-127 458.8 306 81.4
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.5e-124 449.1 307 79.2
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 7.6e-121 437.6 299 78.9
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 9.9e-121 437.2 299 79.3
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 1.6e-118 429.9 306 75.5
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 6.4e-104 381.3 301 68.4
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.2e-103 379.0 306 66.3
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 1.6e-102 376.7 308 65.3
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.0e-101 372.5 305 65.9
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 7.4e-100 367.9 308 65.3
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 1.8e-98 363.2 301 63.5
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.0e-98 362.1 301 63.1
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.2e-97 360.5 313 61.7
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-95 354.0 298 61.7
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.1e-95 354.0 295 62.4
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.1e-95 354.0 306 63.1
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 5.5e-95 351.7 301 62.5
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 9.3e-95 350.9 302 62.9
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 9.3e-95 350.9 300 62.0
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.6e-94 350.1 300 62.0
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 4.6e-94 348.6 256 69.9
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 7.9e-94 347.8 302 61.9
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.0e-93 347.4 320 60.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.3e-93 347.1 301 61.8
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.8e-93 346.7 262 67.9
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.9e-93 345.5 289 62.6
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 6.7e-93 344.7 302 60.3
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 3.3e-92 342.4 300 60.7
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 3.3e-92 342.4 302 62.3
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 7.4e-92 341.3 302 59.9
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 7.4e-92 341.3 306 61.4
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.1e-91 339.7 258 67.8
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 2.1e-91 339.7 306 60.5
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 2.8e-91 339.3 300 59.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 3.7e-91 339.0 305 60.3
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 4.8e-91 338.6 300 61.0
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 8.1e-91 337.8 307 59.6
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 8.1e-91 337.8 292 61.3
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.4e-90 337.0 303 60.1
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.8e-90 336.7 303 58.7
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 5.3e-90 335.1 257 66.5
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.2e-89 334.0 257 66.1
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.0e-89 333.2 257 66.1
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 2.0e-89 333.2 257 66.1
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 2.0e-89 333.2 303 61.1
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 2.6e-89 332.8 299 59.5
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.4e-89 332.4 303 58.4
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 5.8e-89 331.6 263 64.6
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.8e-89 331.6 299 58.5
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 2.2e-88 329.7 268 62.3
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.9e-88 329.3 301 57.5
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 3.8e-88 328.9 297 58.6
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.8e-88 328.9 252 66.3
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.4e-87 327.0 271 61.6
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.9e-87 326.6 260 62.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.5e-87 326.2 254 63.8
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 3.2e-87 325.9 260 61.9
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 5.5e-87 325.1 266 62.0
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 7.1e-87 324.7 286 64.0
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 9.3e-87 324.3 266 62.0
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.6e-86 323.6 300 56.7
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 2.7e-86 322.8 234 68.8
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 3.5e-86 322.4 258 63.6
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 4.6e-86 322.0 297 57.6
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 6.0e-86 321.6 293 57.7
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 1.3e-85 320.5 234 68.4
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.3e-85 319.7 259 61.8
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 3.0e-85 319.3 298 56.7
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.9e-85 318.9 380 50.3
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 1.5e-84 317.0 268 63.8
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 4.3e-84 315.5 314 55.4
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 4.3e-84 315.5 252 65.5
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.3e-83 313.9 260 63.1
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 2.1e-83 313.2 309 55.0
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 4.8e-83 312.0 297 55.9
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 6.3e-83 311.6 284 58.5
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 5.9e-81 305.1 248 61.3
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.7e-80 303.5 264 60.2
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 5.0e-80 302.0 252 61.9
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 5.0e-80 302.0 252 61.5
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 5.5e-79 298.5 249 59.8
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.6e-78 295.4 216 69.4
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 7.9e-78 294.7 243 61.3
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 1.8e-77 293.5 325 50.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.9e-76 290.0 302 53.6
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 3.3e-76 289.3 237 61.6
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.1e-74 282.7 215 64.7
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.5e-73 280.4 217 65.4
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.5e-73 280.4 216 66.2
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 3.4e-73 279.3 239 59.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.3e-72 277.3 276 53.3
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.7e-72 276.9 246 63.4
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 2.5e-71 273.1 220 63.2
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.7e-67 260.4 191 68.6
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 2.2e-67 260.0 297 48.8
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.5e-63 246.5 214 58.9
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 7.9e-62 241.5 191 62.3
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 7.0e-58 228.4 205 56.6
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 5.9e-57 225.3 298 44.3
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.0e-53 214.5 259 46.3
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 3.3e-52 209.5 224 51.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 1.2e-49 201.1 265 44.5
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 1.0e-45 188.0 229 46.7
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.4e-44 182.6 147 64.6
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.5e-41 172.9 130 65.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 9.2e-34 148.3 247 38.9
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 3.5e-33 146.4 97 70.1
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.4e-20 102.8 67 74.6
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.3e-19 101.3 67 74.6
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.3e-19 101.3 67 74.6
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 2.4e-18 97.1 75 62.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.5e-12 75.5 66 56.1
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.9e-11 73.6 64 59.4
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 2.5e-07 60.5 35 77.1


User provided reference genes

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