Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 4.3e-275 950.7 464 100.0
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.9e-198 696.0 458 76.6
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.5e-198 695.7 461 76.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 2.5e-198 695.7 458 76.4
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 6.5e-191 671.0 458 76.2
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.5e-182 643.3 458 72.3
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 7.2e-182 641.0 458 69.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.1e-181 639.4 458 70.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.5e-179 633.3 458 68.1
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.4e-179 632.1 458 70.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 5.4e-177 624.8 458 67.0
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.6e-176 623.2 462 66.2
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.9e-176 621.3 458 66.4
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 6.6e-175 617.8 458 66.2
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 7.3e-174 614.4 464 66.4
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.8e-173 612.5 456 64.7
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 2.8e-173 612.5 452 66.4
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 3.6e-173 612.1 458 66.8
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.4e-172 610.1 458 65.5
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 2.3e-172 609.4 458 65.5
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.3e-172 609.4 461 65.7
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 3.1e-172 609.0 455 65.9
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.1e-172 609.0 458 65.3
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 4.0e-172 608.6 458 65.9
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 5.2e-172 608.2 453 65.6
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 6.8e-172 607.8 460 66.5
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.2e-171 607.1 483 64.0
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.5e-171 606.7 465 64.1
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 3.4e-171 605.5 458 65.7
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 9.8e-171 604.0 458 65.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.7e-170 603.2 458 65.5
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.9e-170 602.4 458 65.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.4e-169 600.1 465 64.9
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.9e-169 599.7 456 65.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.4e-169 599.4 458 64.4
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.2e-168 597.0 458 63.8
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.6e-168 596.7 458 64.4
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 6.0e-168 594.7 460 65.0
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 7.8e-168 594.3 458 63.5
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.0e-167 594.0 455 63.7
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 5.0e-167 591.7 462 62.3
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 8.6e-167 590.9 458 63.1
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 8.6e-167 590.9 458 62.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.9e-166 589.7 475 61.1
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.5e-166 589.3 453 63.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.3e-166 589.0 447 65.8
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 4.3e-166 588.6 458 62.7
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 9.5e-166 587.4 453 63.8
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.2e-165 587.0 449 63.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.2e-165 584.7 474 62.4
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 8.1e-165 584.3 459 62.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.1e-164 583.9 457 62.1
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.3e-164 582.8 453 62.7
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 4.0e-164 582.0 457 62.4
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 5.2e-164 581.6 446 64.6
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.2e-163 580.5 457 62.6
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.2e-163 580.5 458 64.0
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.0e-163 579.7 458 62.7
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.0e-163 579.7 449 62.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 3.4e-163 578.9 457 62.1
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.4e-163 578.9 457 62.1
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 3.4e-163 578.9 459 62.5
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 4.4e-163 578.6 452 62.2
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 5.8e-163 578.2 464 62.3
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 7.5e-163 577.8 457 61.9
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-162 576.6 457 61.7
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 8.3e-162 574.3 458 63.3
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.4e-161 571.6 452 63.1
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 9.2e-161 570.9 457 62.6
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.1e-160 569.7 449 61.5
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 2.7e-160 569.3 447 63.5
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 4.6e-160 568.5 447 63.1
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-158 563.5 570 53.5
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.1e-156 557.4 453 61.4
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.3e-154 550.4 458 59.4
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 6.4e-154 548.1 459 59.9
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 6.4e-154 548.1 450 61.3
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.4e-154 547.7 465 60.9
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.4e-154 547.7 458 60.9
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 9.2e-153 544.3 455 58.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.0e-151 540.8 457 58.9
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.3e-151 540.4 447 61.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.9e-146 521.9 472 58.3
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.5e-142 510.4 455 56.5
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 8.4e-138 494.6 458 54.4
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.5e-134 483.8 439 55.8
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.5e-134 483.0 462 55.0
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 7.4e-134 481.5 305 75.1
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.3e-133 480.7 305 73.8
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 6.4e-130 468.4 424 56.6
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.4e-129 466.5 453 53.4
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 3.9e-127 459.1 445 56.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.8e-124 450.3 414 56.0
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.3e-119 434.1 407 58.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.5e-91 339.3 194 82.5
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 6.5e-90 335.5 226 71.2
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 3.8e-82 309.7 245 64.5
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.0e-74 285.0 399 36.3
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 3.5e-67 260.0 389 36.5
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 3.8e-66 256.5 386 37.3
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 8.3e-53 212.2 419 29.1
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 1.3e-45 188.3 106 80.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 5.4e-44 183.0 272 36.8
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 8.9e-39 165.6 91 80.2
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 3.1e-31 140.6 139 57.6
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 6.6e-26 122.9 92 62.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.8e-24 117.5 93 58.1
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.8e-24 117.5 93 58.1
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 2.8e-24 117.5 93 58.1
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.2e-12 77.0 75 54.7
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.1e-12 76.3 73 56.2
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 7.1e-12 76.3 59 64.4
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.6e-11 75.1 75 53.3
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.3e-08 65.5 72 50.0
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 2.8e-08 64.3 48 62.5


User provided reference genes

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