Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.9e-140 501.9 252 100.0
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.8e-101 371.3 190 95.8
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.3e-80 302.0 201 79.1
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.1e-78 295.8 204 77.0
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.6e-77 292.7 203 76.8
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.0e-76 290.8 203 75.4
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.7e-76 290.0 202 76.2
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 3.1e-70 269.2 161 85.1
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 7.2e-67 258.1 195 66.7
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.1e-64 250.8 197 67.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 3.3e-64 249.2 181 72.9
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 9.7e-64 247.7 167 76.0
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 3.1e-62 242.7 186 69.4
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 9.4e-59 231.1 183 63.9
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 6.7e-57 224.9 171 68.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 8.8e-57 224.6 172 66.3
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.5e-56 223.8 170 68.2
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.6e-56 223.0 171 68.4
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 7.4e-56 221.5 166 69.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 7.4e-56 221.5 170 67.1
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 5.3e-54 215.3 170 65.9
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 7.0e-54 214.9 170 63.5
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.6e-53 213.8 170 64.7
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.3e-52 210.7 170 61.8
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.0e-52 208.8 203 57.6
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 8.5e-52 208.0 176 63.6
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.5e-51 207.2 165 63.0
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.2e-51 205.7 172 62.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 5.5e-51 205.3 165 63.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.7e-50 203.0 174 59.8
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 3.6e-50 202.6 172 59.3
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.8e-49 200.3 169 59.8
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 2.3e-49 199.9 169 60.4
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 5.2e-49 198.7 159 62.9
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.6e-48 196.4 166 60.8
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 3.4e-48 196.1 166 60.8
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 3.4e-48 196.1 165 61.2
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.7e-47 192.6 165 58.8
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 4.8e-47 192.2 172 59.3
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 6.3e-47 191.8 165 58.8
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 6.3e-47 191.8 166 61.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.4e-46 189.9 166 59.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 4.1e-46 189.1 165 58.2
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 5.3e-46 188.7 165 58.8
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 9.1e-46 188.0 172 58.1
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 9.1e-46 188.0 145 69.0
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.2e-45 187.6 166 56.6
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.7e-45 184.9 165 60.6
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.7e-44 183.7 165 60.0
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 2.9e-44 183.0 166 56.0
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 6.5e-44 181.8 162 58.0
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 5.5e-43 178.7 103 87.4
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 7.2e-43 178.3 168 55.4
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 9.4e-43 177.9 164 59.8
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.1e-42 176.8 163 53.4
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.3e-41 173.3 171 52.0
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 7.5e-40 168.3 165 52.1
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 9.8e-40 167.9 201 46.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 4.8e-39 165.6 155 54.8
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 6.3e-39 165.2 155 54.8
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.2e-37 161.0 162 49.4
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.6e-37 160.6 167 51.5
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 4.5e-37 159.1 173 44.5
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 7.7e-37 158.3 164 50.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 2.3e-36 156.8 165 49.7
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 3.8e-36 156.0 165 47.3
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 5.0e-36 155.6 158 51.3
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.6e-36 155.2 170 47.6
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.6e-36 155.2 170 47.6
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 8.6e-36 154.8 158 50.6
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 8.6e-36 154.8 169 50.3
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.1e-35 154.5 168 48.8
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.5e-35 153.3 119 64.7
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 2.5e-35 153.3 164 43.9
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 5.5e-35 152.1 158 50.0
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.1e-34 150.2 158 49.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.1e-34 150.2 158 49.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.8e-33 147.1 158 49.4
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 4.0e-33 146.0 158 49.4
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 4.0e-33 146.0 178 47.2
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.2e-33 145.6 158 48.1
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 5.2e-33 145.6 136 55.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 6.8e-33 145.2 160 50.0
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 8.9e-33 144.8 166 46.4
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.5e-32 144.1 169 46.2
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.0e-32 143.7 158 48.7
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 7.5e-32 141.7 158 47.5
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.8e-31 139.8 149 47.7
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 6.3e-31 138.7 148 46.6
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.7e-29 133.3 155 44.5
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.0e-28 131.3 155 45.2
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.3e-28 131.0 156 45.5
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 6.6e-28 128.6 155 44.5
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.0e-20 104.8 118 49.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 4.3e-19 99.4 90 57.8
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 4.3e-19 99.4 114 46.5
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 6.2e-18 95.5 134 36.6
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 6.8e-17 92.0 109 48.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 6.8e-17 92.0 105 45.7
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.1e-14 84.7 69 59.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 6.6e-12 75.5 49 71.4
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 9.9e-08 61.6 46 56.5


User provided reference genes

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