Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.9e-208 729.2 430 100.0
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 3.3e-189 665.2 410 97.3
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 3.2e-176 622.1 410 88.8
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 4.4e-149 531.9 413 68.8
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 6.3e-148 528.1 421 77.9
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 4.1e-147 525.4 410 68.3
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 2.0e-146 523.1 446 75.3
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 2.7e-146 522.7 410 67.8
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 7.8e-146 521.2 410 68.0
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.6e-143 513.5 375 84.5
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 8.0e-143 511.1 404 66.1
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 1.4e-142 510.4 406 65.8
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 2.3e-142 509.6 414 64.5
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 8.9e-142 507.7 404 64.9
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 3.2e-139 499.2 406 73.6
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 9.2e-139 497.7 409 67.0
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 3.3e-136 489.2 410 65.1
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 5.6e-136 488.4 390 67.2
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 1.6e-135 486.9 416 64.7
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 1.6e-135 486.9 413 62.7
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 2.1e-135 486.5 413 63.2
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 2.1e-135 486.5 413 63.0
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 2.8e-135 486.1 413 63.4
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 4.7e-135 485.3 423 61.5
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 8.0e-135 484.6 405 64.0
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.4e-134 483.8 410 64.1
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 4.0e-134 482.3 411 62.3
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 7.5e-133 478.0 412 73.3
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.3e-132 477.2 405 63.2
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 1.7e-132 476.9 408 64.2
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 2.9e-132 476.1 410 63.2
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 3.7e-132 475.7 412 61.9
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 3.7e-132 475.7 412 62.1
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 1.4e-131 473.8 438 58.2
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 1.4e-131 473.8 405 61.7
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 1.2e-130 470.7 397 64.2
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.5e-130 469.2 411 61.1
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.5e-130 469.2 411 60.8
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.0e-129 467.6 411 60.8
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 2.3e-129 466.5 412 67.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.1e-128 464.2 403 60.5
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.9e-128 463.4 410 59.8
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 5.6e-128 461.8 411 59.6
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 7.3e-128 461.5 414 69.3
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 2.8e-127 459.5 415 60.2
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 8.1e-127 458.0 393 63.4
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 1.4e-126 457.2 504 52.0
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 2.3e-126 456.4 407 60.0
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 4.0e-126 455.7 406 59.1
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 5.2e-126 455.3 407 60.4
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 3.4e-125 452.6 402 60.2
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 4.4e-125 452.2 372 64.0
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 4.4e-125 452.2 433 58.4
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 2.2e-124 449.9 436 60.1
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.2e-124 449.9 412 58.7
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 8.3e-124 448.0 403 60.0
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.1e-123 447.6 443 56.7
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 2.4e-123 446.4 417 58.5
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 7.1e-123 444.9 407 59.2
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 3.5e-122 442.6 428 55.6
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 3.0e-121 439.5 445 56.2
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 1.9e-120 436.8 441 56.2
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.9e-120 436.8 406 67.5
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 3.3e-120 436.0 390 58.5
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 3.3e-120 436.0 303 73.3
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 4.7e-119 432.2 305 71.8
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 6.2e-119 431.8 305 72.1
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.4e-118 430.6 305 70.8
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 3.1e-118 429.5 393 59.5
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 6.8e-118 428.3 304 72.0
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 8.9e-118 427.9 305 71.8
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 2.0e-117 426.8 305 71.1
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 2.0e-117 426.8 305 71.1
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.0e-117 426.8 305 71.5
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 4.4e-117 425.6 404 57.4
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 7.6e-117 424.9 390 57.7
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.7e-116 423.7 398 57.3
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.7e-116 423.7 439 55.6
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.7e-116 423.7 439 55.6
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 1.7e-116 423.7 305 69.2
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.2e-116 423.3 411 57.4
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 3.8e-116 422.5 305 69.2
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 5.4e-115 418.7 423 55.6
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 5.4e-115 418.7 429 54.1
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 7.8e-114 414.8 302 67.9
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 1.0e-113 414.5 404 56.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 5.1e-113 412.1 421 55.1
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.5e-112 410.6 357 61.6
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.5e-112 409.8 391 56.5
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 1.8e-110 403.7 311 65.9
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 2.4e-110 403.3 292 69.9
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.1e-110 402.9 411 54.7
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 4.9e-108 395.6 413 52.3
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 7.8e-106 388.3 414 52.4
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 3.9e-105 386.0 292 68.2
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 3.9e-105 386.0 292 68.2
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 1.1e-104 384.4 415 52.5
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 2.8e-103 379.8 409 52.6
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 4.8e-103 379.0 304 64.1
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.8e-102 377.1 404 53.2
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 9.0e-102 374.8 407 52.8
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-98 363.6 389 53.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.5e-98 362.8 389 53.2
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.6e-98 362.5 389 53.0
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.9e-98 361.7 389 53.0
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.7e-97 358.6 389 52.7
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.4e-94 350.9 412 48.5
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 7.6e-93 345.1 301 57.5
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.0e-89 334.7 271 63.8
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 1.8e-89 334.0 410 46.1
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 6.9e-86 322.0 261 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 2.0e-85 320.5 335 50.4
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 5.9e-77 292.4 302 51.3
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.4e-75 287.7 411 44.8
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.1e-70 270.0 299 50.2
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.0e-65 255.0 278 51.4
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.4e-62 244.6 264 51.5
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 7.0e-54 215.7 255 49.4
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.2e-52 210.7 150 68.7
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 1.6e-50 204.5 157 66.2
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 8.8e-49 198.7 364 35.7
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 5.7e-48 196.1 148 70.9
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.7e-42 177.2 128 70.3
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 1.0e-41 175.3 124 72.6
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.0e-36 158.7 116 69.0
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.1e-35 155.2 114 63.2
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 9.5e-27 125.6 79 75.9
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 5.4e-22 109.8 73 75.3
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.5e-19 100.9 149 42.3
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 9.2e-14 82.4 66 62.1
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 2.8e-10 70.9 410 21.0
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 1.8e-09 68.2 72 50.0
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 1.4e-06 58.5 68 51.5
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 1.9e-06 58.2 50 60.0


User provided reference genes

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