Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 2.3e-182 642.1 332 100.0
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.9e-147 526.2 409 71.1
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 8.7e-121 437.6 355 71.5
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 4.6e-114 415.2 350 69.1
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 1.3e-113 413.7 349 69.6
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 6.3e-87 325.1 333 63.4
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.5e-83 313.9 354 57.3
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 5.9e-61 238.8 363 46.3
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 2.4e-54 216.9 359 42.6
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 1.3e-47 194.5 356 40.7
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.2e-47 193.7 344 42.2
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.9e-47 193.4 355 40.6
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.3e-44 183.7 347 39.2
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 2.3e-41 173.7 363 38.0
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 6.8e-41 172.2 352 38.6
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 6.8e-41 172.2 359 38.2
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.4e-38 164.5 340 40.9
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 2.7e-37 160.2 352 38.1
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 3.9e-36 156.4 355 37.2
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 3.9e-36 156.4 354 38.4
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 5.1e-36 156.0 361 36.3
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 5.6e-35 152.5 349 35.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 1.2e-34 151.4 332 38.6
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 4.7e-34 149.4 358 36.0
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 4.7e-34 149.4 357 38.1
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.8e-33 147.5 341 37.8
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 4.0e-33 146.4 369 33.1
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 2.6e-32 143.7 326 37.4
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 3.4e-32 143.3 418 33.0
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 3.4e-32 143.3 257 44.7
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 2.2e-31 140.6 336 35.7
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.2e-31 140.6 331 35.6
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 8.4e-31 138.7 333 37.5
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 1.9e-30 137.5 267 38.6
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.9e-30 137.5 333 36.0
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 3.2e-30 136.7 321 36.8
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.2e-30 136.7 331 34.7
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 4.2e-30 136.3 382 34.0
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 1.2e-29 134.8 378 34.1
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 4.6e-29 132.9 328 36.3
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 3.9e-28 129.8 350 34.0
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.5e-27 127.9 325 35.1
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.2e-26 124.8 368 32.1
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 1.2e-26 124.8 346 32.7
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 2.1e-26 124.0 369 32.2
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 3.1e-25 120.2 269 39.4
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 1.5e-24 117.9 276 37.3
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 2.0e-24 117.5 364 32.1
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.2e-23 114.0 329 31.9
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 2.9e-23 113.6 262 35.9
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.9e-22 110.9 271 34.3
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.9e-22 110.9 271 34.3
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.9e-22 110.9 271 34.3
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 3.2e-22 110.2 263 36.1
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 5.4e-22 109.4 324 33.6
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 7.1e-22 109.0 280 33.6
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 1.6e-21 107.8 266 34.6
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.6e-21 107.8 233 40.8
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 2.3e-20 104.0 256 35.5
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 5.1e-20 102.8 232 35.8
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 8.7e-20 102.1 274 34.7
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-19 101.7 274 34.3
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.5e-19 101.3 248 35.1
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 1.5e-19 101.3 334 29.9
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.5e-19 101.3 278 33.5
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.9e-19 100.9 334 32.3
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 7.3e-19 99.0 272 34.9
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 9.6e-19 98.6 252 36.1
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.6e-18 97.8 218 35.8
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 2.1e-18 97.4 275 35.3
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 3.6e-18 96.7 248 33.9
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 4.8e-18 96.3 158 42.4
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 8.1e-18 95.5 275 32.0
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 8.1e-18 95.5 238 39.1
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 1.8e-17 94.4 242 35.1
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 2.4e-17 94.0 218 39.4
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 3.1e-17 93.6 273 33.0
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 3.1e-17 93.6 244 33.2
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 1.5e-16 91.3 296 33.8
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 1.5e-16 91.3 235 34.9
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 2.6e-16 90.5 254 33.1
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 2.6e-16 90.5 255 35.3
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 2.6e-16 90.5 172 39.0
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 4.9e-15 86.3 256 33.6
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 4.9e-15 86.3 273 33.0
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 6.4e-15 85.9 241 36.5
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 7.1e-14 82.4 258 32.6
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 2.1e-13 80.9 277 30.3
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 2.1e-13 80.9 253 32.0
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 3.5e-13 80.1 262 31.7
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 4.6e-13 79.7 240 32.9
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 7.9e-13 79.0 240 32.1
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 1.8e-12 77.8 234 32.9
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 3.0e-12 77.0 267 30.7
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 5.1e-12 76.3 254 31.9
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 6.7e-12 75.9 222 33.8
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 1.5e-11 74.7 218 31.2
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 4.3e-11 73.2 339 28.6
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 1.3e-10 71.6 305 30.5
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 1.3e-10 71.6 216 33.3
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 2.8e-10 70.5 218 33.0
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 8.1e-10 68.9 244 32.0
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 8.1e-10 68.9 215 29.8
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 2.2e-07 60.8 251 26.3
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 2.9e-07 60.5 257 27.2
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 6.4e-07 59.3 205 32.7
ECA233G2997 Erigeron canadensis HOM05D003457 ORTHO05D009249 1.1e-06 58.5 276 27.9
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 4.2e-06 56.6 332 25.3


User provided reference genes

Program Settings