Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.8e-117 426.0 232 100.0
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.1e-98 363.6 230 90.0
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 3.2e-77 292.4 181 75.7
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 6.9e-32 141.7 135 53.3
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 9.0e-32 141.4 146 45.9
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 9.0e-32 141.4 143 46.2
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.0e-31 140.2 149 51.0
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.0e-30 137.9 131 49.6
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 1.9e-29 133.7 145 44.8
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 9.3e-29 131.3 143 44.8
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 2.7e-28 129.8 136 46.3
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.7e-28 129.8 151 47.7
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 3.5e-28 129.4 148 45.3
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 4.6e-28 129.0 148 42.6
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 7.9e-28 128.3 163 41.7
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.3e-27 127.5 154 44.2
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.8e-27 127.1 132 50.0
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 3.0e-27 126.3 146 43.2
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.0e-27 126.3 146 43.2
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.1e-26 124.4 143 42.7
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 1.1e-26 124.4 143 42.0
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 1.9e-26 123.6 143 42.7
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.5e-26 123.2 146 42.5
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 3.3e-26 122.9 139 46.8
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.3e-26 122.5 143 42.7
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 9.7e-26 121.3 135 43.7
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.6e-25 120.6 140 45.0
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 2.2e-25 120.2 162 39.5
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.7e-25 119.4 146 42.5
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 3.7e-25 119.4 150 44.0
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 8.2e-25 118.2 136 41.9
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 8.2e-25 118.2 127 48.0
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 1.4e-24 117.5 143 42.0
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.8e-24 117.1 146 42.5
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 1.8e-24 117.1 143 41.3
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 2.4e-24 116.7 134 43.3
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.1e-24 115.9 126 46.0
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 9.0e-24 114.8 148 39.9
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 2.0e-23 113.6 163 39.9
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 3.4e-23 112.8 163 39.9
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 4.5e-23 112.5 129 45.7
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.6e-23 111.7 126 44.4
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 7.6e-23 111.7 127 45.7
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.0e-22 111.3 150 40.0
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 1.3e-22 110.9 134 43.3
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.7e-22 110.5 130 43.1
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.7e-22 110.5 163 39.3
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.2e-22 110.2 147 42.2
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 2.9e-22 109.8 131 46.6
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 3.8e-22 109.4 128 45.3
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 5.0e-22 109.0 143 42.0
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 5.0e-22 109.0 129 43.4
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 1.1e-21 107.8 158 36.1
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.9e-21 107.1 147 40.8
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 1.9e-21 107.1 132 42.4
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 1.9e-21 107.1 132 42.4
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.9e-21 107.1 145 40.0
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 3.2e-21 106.3 128 41.4
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 7.2e-21 105.1 130 44.6
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 9.4e-21 104.8 154 36.4
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 9.4e-21 104.8 143 38.5
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 4.6e-20 102.4 156 37.2
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 1.0e-19 101.3 154 34.4
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.0e-19 101.3 122 45.1
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.4e-19 100.9 161 38.5
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 1.8e-19 100.5 154 34.4
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 5.1e-19 99.0 135 43.7
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 6.7e-19 98.6 131 39.7
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 1.5e-18 97.4 147 38.8
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.5e-18 97.4 153 35.3
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 1.9e-18 97.1 129 40.3
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.9e-18 97.1 131 38.9
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 2.5e-18 96.7 128 41.4
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 3.3e-18 96.3 135 39.3
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 7.4e-18 95.1 127 37.0
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 7.4e-18 95.1 140 39.3
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 9.7e-18 94.7 125 40.8
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 9.7e-18 94.7 128 43.0
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 1.3e-17 94.4 132 42.4
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.3e-17 94.4 129 42.6
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 1.3e-17 94.4 126 42.9
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.7e-17 94.0 130 38.5
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 1.7e-17 94.0 148 39.2
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 2.2e-17 93.6 125 40.8
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 2.2e-17 93.6 123 39.0
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 2.2e-17 93.6 125 40.8
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 2.2e-17 93.6 126 40.5
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 4.8e-17 92.4 126 39.7
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 4.8e-17 92.4 111 39.6
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 6.3e-17 92.0 112 43.8
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 6.3e-17 92.0 127 37.0
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 8.2e-17 91.7 121 39.7
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 8.2e-17 91.7 134 36.6
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.1e-16 91.3 132 42.4
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.4e-16 90.9 132 41.7
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 1.8e-16 90.5 124 39.5
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.8e-16 90.5 158 32.9
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 1.8e-16 90.5 123 38.2
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 1.8e-16 90.5 158 32.9
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 1.8e-16 90.5 158 32.9
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.8e-16 90.5 138 41.3
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 1.8e-16 90.5 151 35.8
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 1.8e-16 90.5 132 41.7
Nitab4.5_0005564g0030 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.8e-16 90.5 110 46.4
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.8e-16 90.5 127 37.0
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 2.4e-16 90.1 133 39.1
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 4.1e-16 89.4 132 40.9
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 6.9e-16 88.6 129 37.2
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.2e-15 87.8 129 38.8
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.5e-15 87.4 130 40.8
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 2.0e-15 87.0 129 38.0
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 3.4e-15 86.3 111 38.7
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 5.9e-15 85.5 147 34.7
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 7.7e-15 85.1 155 34.2
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 2.2e-14 83.6 126 38.1
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.2e-14 83.6 97 43.3
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 2.2e-14 83.6 138 34.8
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 2.2e-14 83.6 129 34.9
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 2.9e-14 83.2 126 38.1
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 2.9e-14 83.2 126 38.1
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 2.9e-14 83.2 126 38.1
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 2.9e-14 83.2 123 41.5
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 2.9e-14 83.2 120 39.2
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 3.8e-14 82.8 130 35.4
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.0e-14 82.4 150 31.3
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 5.0e-14 82.4 108 39.8
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 5.0e-14 82.4 135 34.8
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-13 81.3 150 36.7
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.9e-13 80.5 148 35.1
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.9e-13 80.5 120 36.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 3.2e-13 79.7 126 38.1
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 4.2e-13 79.3 126 35.7
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 9.4e-13 78.2 150 34.7
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 1.2e-12 77.8 149 34.9
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 1.2e-12 77.8 151 34.4
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 1.2e-12 77.8 149 34.9
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 1.2e-12 77.8 136 33.1
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.7e-12 76.6 93 40.9
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 2.7e-12 76.6 110 38.2
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.1e-12 75.5 156 30.8
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.9e-12 75.1 121 37.2
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.9e-12 75.1 159 31.4
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 7.9e-12 75.1 118 31.4
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 1.0e-11 74.7 116 37.1
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-11 74.3 127 34.6
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 1.4e-11 74.3 131 33.6
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 1.4e-11 74.3 131 33.6
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.3e-11 73.6 142 34.5
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 2.3e-11 73.6 147 34.7
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 6.7e-11 72.0 123 35.8
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 6.7e-11 72.0 145 33.8
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 6.7e-11 72.0 145 33.8
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 2.6e-10 70.1 123 29.3
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 3.3e-10 69.7 94 42.6
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.4e-10 69.3 139 35.3
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 4.4e-10 69.3 131 32.8
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 4.4e-10 69.3 131 32.8
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 4.4e-10 69.3 131 32.8
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 9.7e-10 68.2 136 36.8
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.3e-09 67.8 158 29.1
ATR1159G057 Amborella trichopoda HOM05D020218 ORTHO05D013427 1.3e-09 67.8 109 34.9
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.7e-09 67.4 139 30.2
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 4.8e-09 65.9 134 31.3
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.1e-08 64.7 66 43.9
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 1.4e-08 64.3 89 37.1
Eucgr.E01938 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.4e-08 64.3 99 37.4
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 2.4e-08 63.5 136 30.1
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 4.1e-08 62.8 136 29.4
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.3e-08 62.4 158 27.2
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 2.0e-07 60.5 136 30.1
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 2.0e-07 60.5 136 30.1
Nitab4.5_0001004g0110 Nicotiana tabacum HOM05D002733 ORTHO05D003856 3.4e-07 59.7 53 50.9
ATR0594G191 Amborella trichopoda HOM05D020218 ORTHO05D013427 4.5e-07 59.3 111 33.3
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 4.5e-07 59.3 134 30.6
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 4.5e-07 59.3 88 39.8
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.9e-07 58.9 98 34.7
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.8e-06 56.2 88 36.4
COL.COLO4_00094 Corchorus olitorius HOM05D002733 ORTHO05D003856 5.0e-06 55.8 81 42.0


User provided reference genes

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