Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 7.0e-122 440.7 225 100.0
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 1.2e-92 343.6 225 76.4
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.2e-91 339.3 243 71.2
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.9e-90 336.3 229 73.4
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 2.4e-90 335.9 225 75.6
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.1e-90 335.1 233 72.5
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 5.4e-90 334.7 232 73.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 7.0e-90 334.3 229 73.4
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 9.2e-90 334.0 227 73.6
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 9.2e-90 334.0 229 73.4
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.7e-89 332.4 241 71.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 3.5e-89 332.0 229 72.9
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 4.6e-89 331.6 225 73.8
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 7.8e-89 330.9 228 73.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.3e-88 329.3 230 72.2
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.3e-88 329.3 229 72.1
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.0e-88 328.9 235 71.1
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 8.6e-88 327.4 225 73.3
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 8.6e-88 327.4 222 74.8
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.9e-87 326.2 225 72.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.9e-87 326.2 224 72.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.5e-87 325.9 225 73.3
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.3e-87 325.1 226 73.0
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 4.3e-87 325.1 228 71.9
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 5.6e-87 324.7 228 70.6
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.3e-87 324.3 221 74.2
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.2e-86 323.6 225 72.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.6e-86 323.2 223 73.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.6e-86 323.2 226 73.0
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.8e-86 322.4 218 74.3
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.8e-86 322.4 225 72.9
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 2.8e-86 322.4 226 72.6
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 4.7e-86 321.6 229 71.2
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 4.7e-86 321.6 229 71.6
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 6.2e-86 321.2 225 73.3
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 6.2e-86 321.2 225 70.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.1e-85 320.5 222 72.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.4e-85 320.1 230 71.3
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.1e-85 318.9 222 73.0
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.1e-85 318.9 225 71.1
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 5.2e-85 318.2 225 72.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 5.2e-85 318.2 227 68.3
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 6.8e-85 317.8 234 70.5
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 8.9e-85 317.4 226 72.1
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.2e-84 317.0 231 69.3
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.5e-84 316.6 227 69.2
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.6e-84 315.8 234 70.1
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 4.4e-84 315.1 220 70.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 4.4e-84 315.1 220 70.9
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 5.8e-84 314.7 223 72.2
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 7.5e-84 314.3 222 72.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 9.8e-84 313.9 223 70.9
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 9.8e-84 313.9 227 67.0
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.3e-83 313.5 227 70.0
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.7e-83 312.0 223 71.3
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.9e-83 311.6 232 69.4
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.9e-83 311.6 185 86.5
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 4.9e-83 311.6 234 67.5
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 6.4e-83 311.2 234 69.2
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 6.4e-83 311.2 236 67.8
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 8.3e-83 310.8 220 70.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.4e-82 310.1 232 69.0
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.9e-82 309.7 220 70.9
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.4e-82 309.3 270 60.4
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.2e-82 308.9 226 67.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 5.4e-82 308.1 223 70.0
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.1e-81 306.2 261 62.8
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.5e-81 305.4 250 64.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 4.6e-81 305.1 177 83.1
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.7e-80 303.1 297 55.9
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.9e-80 302.0 233 67.0
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 5.1e-80 301.6 228 67.1
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 8.6e-80 300.8 222 71.6
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.1e-79 300.4 242 64.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.9e-79 299.7 181 77.9
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 5.6e-79 298.1 231 65.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 5.6e-79 298.1 220 68.2
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.8e-78 295.8 219 68.9
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.8e-78 295.8 220 66.4
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 3.6e-78 295.4 224 65.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 6.2e-78 294.7 222 66.7
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.2e-78 294.7 220 68.6
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.0e-77 292.0 232 62.1
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 6.8e-77 291.2 216 69.4
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 7.6e-76 287.7 291 56.4
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 6.4e-75 284.6 226 66.4
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.4e-74 283.5 187 71.7
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.3e-72 276.9 228 60.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 3.3e-71 272.3 194 70.6
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 4.7e-70 268.5 231 61.9
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 6.2e-70 268.1 229 59.8
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 2.6e-68 262.7 224 58.9
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.9e-66 256.5 163 74.2
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 7.1e-66 254.6 180 65.6
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 4.6e-65 251.9 179 65.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.0e-64 250.8 244 56.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.0e-64 249.2 180 64.4
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 9.0e-61 237.7 184 69.6
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 8.4e-59 231.1 183 58.5
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 5.4e-58 228.4 225 56.4
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 6.0e-57 224.9 381 39.1
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.3e-51 207.2 152 73.7
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 8.1e-46 188.0 182 59.9
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.4e-45 187.2 185 48.1
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 4.5e-44 182.2 149 67.8
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.3e-39 166.0 133 66.2
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.3e-39 166.0 133 66.2
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 3.7e-38 162.5 164 55.5
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 8.4e-35 151.4 181 40.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.2e-34 149.4 138 58.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.2e-33 147.5 165 45.5
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.9e-27 126.3 149 50.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.5e-26 123.2 149 49.7
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 2.5e-23 113.2 82 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.3e-22 110.9 141 44.7
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.4e-18 97.4 108 56.5
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.4e-18 97.4 95 60.0
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.9e-18 97.1 54 77.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 5.5e-18 95.5 100 57.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.8e-13 80.5 94 52.1
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-09 67.0 53 58.5
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 4.7e-09 65.9 45 60.0


User provided reference genes

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