Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 6.9e-309 1063.1 540 100.0
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.4e-253 879.4 511 89.4
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 2.2e-230 802.4 522 80.8
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.9e-229 799.3 522 81.2
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 1.2e-228 796.6 522 80.5
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 1.7e-222 776.2 528 79.0
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 2.8e-217 758.8 563 73.7
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.6e-180 636.7 521 65.5
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 5.1e-179 631.7 522 65.1
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 4.3e-178 628.6 521 65.5
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 3.7e-177 625.5 522 64.8
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 2.9e-174 615.9 526 62.5
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 1.2e-172 610.5 523 64.1
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-172 610.1 521 63.5
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 4.6e-172 608.6 483 67.5
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 4.6e-172 608.6 521 62.4
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.3e-171 607.1 521 64.1
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 1.8e-171 606.7 522 62.3
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 3.3e-170 602.4 545 62.4
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 2.2e-169 599.7 522 62.3
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 1.2e-167 594.0 521 60.8
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 6.5e-166 588.2 521 60.3
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.4e-165 587.0 522 61.9
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 9.4e-165 584.3 521 61.6
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.1e-164 583.2 522 61.3
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 2.7e-164 582.8 521 62.0
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 3.6e-164 582.4 522 61.3
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 4.7e-164 582.0 522 60.7
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 6.1e-164 581.6 522 61.5
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 6.1e-164 581.6 522 60.3
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.0e-163 580.9 522 61.3
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.0e-163 580.9 521 61.6
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.4e-163 580.5 522 61.5
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.1e-162 577.4 521 60.8
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 2.0e-162 576.6 522 61.1
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 9.7e-162 574.3 523 61.2
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.2e-161 573.2 522 60.7
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 3.7e-161 572.4 521 60.1
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.8e-161 572.0 522 60.7
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 8.2e-161 571.2 521 59.7
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 3.4e-159 565.8 524 58.8
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 5.0e-158 562.0 487 63.0
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.6e-156 557.0 522 59.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 1.6e-156 557.0 533 58.2
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 2.1e-156 556.6 544 58.1
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 2.7e-156 556.2 523 59.5
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 3.6e-156 555.8 511 60.7
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 4.7e-156 555.4 522 59.8
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 8.0e-156 554.7 532 58.5
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.0e-155 554.3 522 59.6
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 1.0e-155 554.3 522 58.8
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.8e-155 553.5 522 59.0
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 5.2e-155 552.0 522 58.8
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 1.4e-152 543.9 533 58.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 7.0e-152 541.6 522 60.2
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 1.6e-151 540.4 522 57.1
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.6e-151 540.4 523 58.1
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 4.5e-151 538.9 522 56.9
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 1.4e-147 527.3 524 56.1
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 2.3e-147 526.6 522 57.3
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 8.8e-147 524.6 527 58.1
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 3.3e-146 522.7 525 57.0
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 1.3e-145 520.8 530 55.1
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 1.3e-142 510.8 566 53.9
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 1.1e-141 507.7 532 56.0
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 5.5e-141 505.4 528 55.3
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.2e-138 497.7 522 54.6
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 4.4e-138 495.7 523 54.3
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.7e-137 493.8 526 54.8
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 2.3e-134 483.4 534 55.6
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 8.6e-134 481.5 535 51.6
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 7.2e-133 478.4 544 51.8
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 9.8e-130 468.0 532 55.8
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 6.3e-129 465.3 479 55.7
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.6e-127 460.7 531 49.7
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 1.7e-126 457.2 536 52.8
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.8e-126 456.1 534 52.1
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.9e-125 453.8 534 51.9
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 1.9e-125 453.8 529 52.0
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 2.5e-125 453.4 528 51.9
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 3.3e-125 453.0 526 52.3
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 6.1e-124 448.7 526 51.7
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 8.0e-124 448.4 521 51.4
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 2.3e-123 446.8 529 52.6
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 5.2e-123 445.7 547 51.0
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 1.2e-122 444.5 567 49.6
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.2e-122 444.5 465 55.5
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 2.0e-122 443.7 527 51.6
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 2.6e-122 443.4 536 49.3
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.4e-122 442.6 520 51.5
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.3e-121 441.0 547 50.8
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.4e-120 437.6 407 60.2
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 3.2e-120 436.4 405 61.7
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 2.7e-119 433.3 566 48.4
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 4.6e-119 432.6 544 50.0
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.9e-117 427.2 536 51.3
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 9.5e-117 424.9 406 57.9
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 1.4e-115 421.0 547 48.1
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 1.8e-115 420.6 547 47.9
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 8.9e-115 418.3 509 48.3
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.5e-114 417.5 543 48.1
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 9.2e-112 408.3 549 47.4
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.0e-110 404.8 560 47.7
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.0e-110 404.8 546 47.1
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.3e-102 377.1 362 58.8
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.0e-94 351.7 373 53.4
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.9e-93 347.4 255 74.9
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 9.6e-77 292.0 228 66.7
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 5.5e-72 276.2 410 41.5
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 7.4e-69 265.8 229 61.6
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 9.6e-69 265.4 229 61.6
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 5.3e-67 259.6 264 57.2
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 9.0e-67 258.8 174 74.7
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 2.2e-65 254.2 265 56.2
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 2.9e-65 253.8 217 63.1
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 2.1e-55 221.1 556 33.8
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.0e-49 202.2 394 37.8
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 4.7e-47 193.4 554 32.9
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 5.7e-45 186.4 516 31.8
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 6.5e-41 172.9 521 28.8
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 4.7e-39 166.8 482 33.2
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 8.0e-39 166.0 185 50.8
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 9.7e-37 159.1 460 32.0
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-34 151.8 137 60.6
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 7.7e-34 149.4 542 30.3
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 5.0e-33 146.7 128 61.7
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 8.5e-33 146.0 158 51.9
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 3.6e-31 140.6 539 27.6
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 8.3e-28 129.4 492 27.4
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.6e-21 107.8 116 50.9
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 8.6e-17 92.8 80 61.2
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 4.1e-11 73.9 41 80.5
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.2e-07 62.4 133 33.8


User provided reference genes

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