Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000309g0120 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.5e-148 529.6 294 100.0
Nitab4.5_0000754g0070 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.9e-67 259.6 179 82.1
Nitab4.5_0003532g0060 Nicotiana tabacum HOM05D009916 ORTHO05D014164 5.4e-66 255.4 167 83.2
Nitab4.5_0000659g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-22 109.8 71 81.7
CAN.G407.20 Capsicum annuum HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
Solyc03g117450.1 Solanum lycopersicum HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
Solyc03g117460.1 Solanum lycopersicum HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
Sopen03g036340 Solanum pennellii HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
Sopen03g036350 Solanum pennellii HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
PGSC0003DMG400014142 Solanum tuberosum HOM05D000322 ORTHO05D000186 1.2e-12 78.2 60 75.0
Nitab4.5_0000613g0200 Nicotiana tabacum HOM05D000322 ORTHO05D000186 1.6e-12 77.8 59 76.3
CAN.G407.18 Capsicum annuum HOM05D000322 ORTHO05D000186 2.6e-12 77.0 60 73.3
PGSC0003DMG400014143 Solanum tuberosum HOM05D000322 ORTHO05D000186 3.5e-12 76.6 60 73.3
CAN.G407.19 Capsicum annuum HOM05D000322 ORTHO05D000186 4.5e-12 76.3 60 73.3
Peaxi162Scf00332g00123 Petunia axillaris HOM05D000322 ORTHO05D000186 1.0e-11 75.1 60 71.7
Peaxi162Scf00553g00623 Petunia axillaris HOM05D000322 ORTHO05D000186 2.2e-11 73.9 60 70.0
Peaxi162Scf00073g00917 Petunia axillaris HOM05D000322 ORTHO05D000186 3.8e-11 73.2 59 71.2
Peaxi162Scf00073g01323 Petunia axillaris HOM05D000322 ORTHO05D000186 3.8e-11 73.2 104 48.1
Nitab4.5_0002322g0020 Nicotiana tabacum HOM05D000032 ORTHO05D004656 6.5e-11 72.4 60 70.0
Nitab4.5_0004013g0010 Nicotiana tabacum HOM05D000322 ORTHO05D000186 6.5e-11 72.4 60 68.3
Peaxi162Scf00073g01326 Petunia axillaris HOM05D000322 ORTHO05D000186 3.2e-10 70.1 104 47.1
CAN.G407.17 Capsicum annuum HOM05D000322 ORTHO05D000186 4.2e-10 69.7 121 43.8
HanXRQChr11g0348691 Helianthus annuus HOM05D000322 ORTHO05D000186 1.2e-09 68.2 60 60.0
HanXRQChr11g0348651 Helianthus annuus HOM05D000322 ORTHO05D000186 1.6e-09 67.8 60 60.0
Oeu064233.1 Olea europaea HOM05D000322 ORTHO05D000186 2.1e-09 67.4 60 65.0
HanXRQChr11g0348851 Helianthus annuus HOM05D000322 ORTHO05D000186 2.7e-09 67.0 60 60.0
HanXRQChr11g0348731 Helianthus annuus HOM05D000322 ORTHO05D000186 3.6e-09 66.6 60 60.0
Gohir.A10G168100 Gossypium hirsutum HOM05D000322 ORTHO05D000186 4.7e-09 66.2 59 64.4
Gohir.D10G174200 Gossypium hirsutum HOM05D000322 ORTHO05D000186 4.7e-09 66.2 59 64.4
HanXRQChr11g0348801 Helianthus annuus HOM05D000322 ORTHO05D000186 8.0e-09 65.5 60 58.3
Lj3A721T46 Lonicera japonica HOM05D000322 ORTHO05D000186 8.0e-09 65.5 59 59.3
Oeu011216.1 Olea europaea HOM05D000322 ORTHO05D000186 8.0e-09 65.5 104 44.2
Cc03_g04460 Coffea canephora HOM05D000322 ORTHO05D000186 1.4e-08 64.7 104 41.3
HanXRQChr11g0348681 Helianthus annuus HOM05D000322 ORTHO05D000186 1.4e-08 64.7 60 56.7
Gorai.011G194900 Gossypium raimondii HOM05D000322 ORTHO05D000186 1.8e-08 64.3 59 62.7
HanXRQChr11g0348871 Helianthus annuus HOM05D000322 ORTHO05D000186 2.3e-08 63.9 60 56.7
SalBow3G2809 Salvia bowleyana HOM05D000322 ORTHO05D000186 2.3e-08 63.9 110 40.9
Lj3A721T47 Lonicera japonica HOM05D000322 ORTHO05D000186 3.0e-08 63.5 59 57.6
Manes.15G007800 Manihot esculenta HOM05D000322 ORTHO05D000186 3.0e-08 63.5 59 59.3
ECA248G1736 Erigeron canadensis HOM05D000322 ORTHO05D000186 4.0e-08 63.2 60 53.3
Cc04_g12320 Coffea canephora HOM05D000322 ORTHO05D000186 5.2e-08 62.8 59 59.3
Lsat_1_v5_gn_1_58140 Lactuca sativa HOM05D000322 ORTHO05D000186 6.7e-08 62.4 60 55.0
COL.COLO4_34690 Corchorus olitorius HOM05D000322 ORTHO05D000186 8.8e-08 62.0 74 51.4
Lsat_1_v5_gn_1_58060 Lactuca sativa HOM05D000322 ORTHO05D000186 1.2e-07 61.6 60 56.7
Thecc.04G291700 Theobroma cacao HOM05D000322 ORTHO05D000186 1.2e-07 61.6 60 58.3
TAR636G0552 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.2e-07 61.6 59 55.9
TAR636G2675 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.2e-07 61.6 59 55.9
Lsat_1_v5_gn_1_56120 Lactuca sativa HOM05D000322 ORTHO05D000186 1.5e-07 61.2 60 55.0
Oeu030912.1 Olea europaea HOM05D000322 ORTHO05D000186 1.5e-07 61.2 59 57.6
Eucgr.H03778 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.0e-07 60.8 59 55.9
Eucgr.H03975 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.0e-07 60.8 59 55.9
HanXRQChr16g0532951 Helianthus annuus HOM05D000322 ORTHO05D000186 2.0e-07 60.8 60 51.7
Duzib151G0786 Durio zibethinus HOM05D000322 ORTHO05D000186 2.6e-07 60.5 58 60.3
Duzib212G0928 Durio zibethinus HOM05D000322 ORTHO05D000186 2.6e-07 60.5 58 58.6
Lsat_1_v5_gn_1_58100 Lactuca sativa HOM05D000322 ORTHO05D000186 2.6e-07 60.5 60 53.3
Oeu064230.1 Olea europaea HOM05D000322 ORTHO05D000186 2.6e-07 60.5 60 56.7
Oeu064232.1 Olea europaea HOM05D000322 ORTHO05D000186 2.6e-07 60.5 60 56.7
Thecc.04G292800 Theobroma cacao HOM05D000322 ORTHO05D000186 2.6e-07 60.5 59 50.8
Duzib212G0823 Durio zibethinus HOM05D000322 ORTHO05D000186 4.4e-07 59.7 56 60.7
Nn4g25702 Nelumbo nucifera HOM05D000322 ORTHO05D000186 4.4e-07 59.7 59 55.9
Duzib151G0708 Durio zibethinus HOM05D000322 ORTHO05D000186 5.7e-07 59.3 56 57.1
ECA248G0481 Erigeron canadensis HOM05D000322 ORTHO05D000186 5.7e-07 59.3 60 51.7
Cc00_g20720 Coffea canephora HOM05D000322 ORTHO05D000186 7.5e-07 58.9 104 37.5
TAR362G0165 Trochodendron aralioides HOM05D000322 ORTHO05D000186 7.5e-07 58.9 59 54.2
CiPaw.01G143900 Carya illinoinensis HOM05D000322 ORTHO05D000186 9.7e-07 58.5 59 52.5
TAR362G1167 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.3e-06 58.2 59 54.2
TAR636G1643 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.3e-06 58.2 59 54.2
Dinv44597 Davidia involucrata HOM05D000322 ORTHO05D000186 1.7e-06 57.8 110 38.2
Duzib212G0387 Durio zibethinus HOM05D000322 ORTHO05D000186 1.7e-06 57.8 56 58.9
HanXRQChr16g0532961 Helianthus annuus HOM05D000322 ORTHO05D000186 1.7e-06 57.8 104 35.6
Lsat_1_v5_gn_1_58120 Lactuca sativa HOM05D000322 ORTHO05D000186 1.7e-06 57.8 104 36.5
Nn3g21585 Nelumbo nucifera HOM05D000322 ORTHO05D000186 1.7e-06 57.8 61 55.7
Thecc.04G291900 Theobroma cacao HOM05D000322 ORTHO05D000186 1.7e-06 57.8 55 56.4
Gorai.005G063400 Gossypium raimondii HOM05D000322 ORTHO05D000186 2.2e-06 57.4 56 57.1
Gorai.005G064700 Gossypium raimondii HOM05D000322 ORTHO05D000186 2.2e-06 57.4 56 57.1
MD16G1160800 Malus domestica HOM05D000322 ORTHO05D000186 2.2e-06 57.4 58 58.6
QL06p010958 Quercus lobata HOM05D000322 ORTHO05D000186 2.2e-06 57.4 58 51.7
TAR362G0513 Trochodendron aralioides HOM05D000322 ORTHO05D000186 2.2e-06 57.4 59 52.5
Duzib151G0374 Durio zibethinus HOM05D000322 ORTHO05D000186 2.8e-06 57.0 56 57.1
Duzib151G0600 Durio zibethinus HOM05D000322 ORTHO05D000186 2.8e-06 57.0 56 57.1
Thecc.05G206600 Theobroma cacao HOM05D000322 ORTHO05D000186 2.8e-06 57.0 56 58.9
Thecc.05G206800 Theobroma cacao HOM05D000322 ORTHO05D000186 2.8e-06 57.0 56 58.9
Thecc.05G207000 Theobroma cacao HOM05D000322 ORTHO05D000186 2.8e-06 57.0 56 58.9
Eucgr.A00125 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.7e-06 56.6 62 51.6
Eucgr.A00133 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.7e-06 56.6 62 51.6
Eucgr.A00141 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.7e-06 56.6 62 51.6
Eucgr.H03792 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.7e-06 56.6 73 50.7
Gohir.A02G052301 Gossypium hirsutum HOM05D000322 ORTHO05D000186 3.7e-06 56.6 56 55.4
Prupe.1G128800 Prunus persica HOM05D000322 ORTHO05D000186 3.7e-06 56.6 59 54.2
Dinv44336 Davidia involucrata HOM05D000322 ORTHO05D000186 4.8e-06 56.2 104 35.6
Manes.15G007900 Manihot esculenta HOM05D000322 ORTHO05D000186 4.8e-06 56.2 57 49.1
PGR031G3450 Punica granatum HOM05D000322 ORTHO05D000186 4.8e-06 56.2 59 50.8
Thecc.04G292400 Theobroma cacao HOM05D000322 ORTHO05D000186 4.8e-06 56.2 59 49.2
Thecc.04G293000 Theobroma cacao HOM05D000322 ORTHO05D000186 4.8e-06 56.2 59 49.2
Ciclev10007165m.g Citrus clementina HOM05D000322 ORTHO05D000186 6.3e-06 55.8 60 53.3
Duzib052G0424 Durio zibethinus HOM05D000322 ORTHO05D000186 6.3e-06 55.8 59 52.5
COL.COLO4_00427 Corchorus olitorius HOM05D000322 ORTHO05D000186 8.2e-06 55.5 54 57.4
COL.COLO4_03600 Corchorus olitorius HOM05D000322 ORTHO05D000186 8.2e-06 55.5 54 57.4
COL.COLO4_03601 Corchorus olitorius HOM05D000322 ORTHO05D000186 8.2e-06 55.5 54 57.4
Duzib151G0603 Durio zibethinus HOM05D000322 ORTHO05D000186 8.2e-06 55.5 56 55.4
Gohir.D02G057240 Gossypium hirsutum HOM05D000322 ORTHO05D000186 8.2e-06 55.5 56 55.4
Lj6A683G55 Lonicera japonica HOM05D000322 ORTHO05D000186 8.2e-06 55.5 58 53.4
PGR004G1519 Punica granatum HOM05D000322 ORTHO05D000186 8.2e-06 55.5 59 49.2
PGR031G3369 Punica granatum HOM05D000322 ORTHO05D000186 8.2e-06 55.5 59 49.2
Thecc.04G292000 Theobroma cacao HOM05D000322 ORTHO05D000186 8.2e-06 55.5 56 57.1


User provided reference genes

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