Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000309g0070 Nicotiana tabacum HOM05D007385 ORTHO05D009349 9.0e-237 823.2 405 100.0
Nitab4.5_0000309g0300 Nicotiana tabacum HOM05D007385 ORTHO05D009349 1.4e-160 570.1 390 75.9
CAN.G681.4 Capsicum annuum HOM05D007385 ORTHO05D009349 1.2e-153 547.0 392 73.7
Sopen09g035860 Solanum pennellii HOM05D007385 ORTHO05D009349 4.9e-150 535.0 394 70.1
PGSC0003DMG400016606 Solanum tuberosum HOM05D007385 ORTHO05D009349 4.9e-150 535.0 394 70.8
Solyc09g097920.3 Solanum lycopersicum HOM05D007385 ORTHO05D009349 1.2e-145 520.4 427 65.6
Peaxi162Scf00251g00117 Petunia axillaris HOM05D007385 ORTHO05D009349 7.3e-138 494.6 389 66.8
MSTRG.11333 Avicennia marina HOM05D007385 ORTHO05D009349 1.7e-89 334.0 364 48.6
SalBow5G4421 Salvia bowleyana HOM05D007385 ORTHO05D009349 1.8e-88 330.5 394 47.5
Dinv22764 Davidia involucrata HOM05D007385 ORTHO05D009349 5.0e-86 322.4 384 46.4
RcHm_v2.0_Chr7g0183331 Rosa chinensis HOM05D007385 ORTHO05D009349 3.2e-85 319.7 328 50.6
CSS0026709 Camellia sinensis var. sinensis HOM05D007385 ORTHO05D009349 1.6e-84 317.4 369 46.9
Rhsim02G0022600 Rhododendron simsii HOM05D007385 ORTHO05D009349 1.8e-83 313.9 326 50.6
FAN13G1154 Fragaria x ananassa HOM05D007385 ORTHO05D009349 2.6e-82 310.1 334 49.4
QL10p019987 Quercus lobata HOM05D007385 ORTHO05D009349 2.6e-82 310.1 369 44.4
SGA_v2.0_scaffold28G11738 Striga asiatica HOM05D007385 ORTHO05D009349 2.8e-81 306.6 331 48.0
SGA_v2.0_scaffold733G53530 Striga asiatica HOM05D007385 ORTHO05D009349 2.8e-81 306.6 331 48.0
Ciclev10020129m.g Citrus clementina HOM05D007385 ORTHO05D009349 8.2e-81 305.1 370 45.7
Haze_07747 Corylus avellana HOM05D007385 ORTHO05D009349 8.2e-81 305.1 391 45.0
CiPaw.11G055800 Carya illinoinensis HOM05D007385 ORTHO05D009349 1.1e-80 304.7 395 43.8
Cfa019356 Carpinus fangiana HOM05D007385 ORTHO05D009349 1.4e-80 304.3 369 46.6
Lsat_1_v5_gn_5_22980 Lactuca sativa HOM05D007385 ORTHO05D009349 5.3e-80 302.4 327 46.8
HanXRQChr08g0230411 Helianthus annuus HOM05D007385 ORTHO05D009349 1.2e-79 301.2 329 47.7
Lsat_1_v5_gn_5_22940 Lactuca sativa HOM05D007385 ORTHO05D009349 4.5e-79 299.3 327 46.5
MBI16_g10855_MAGBIO Magnolia biondii HOM05D007385 ORTHO05D009349 1.7e-78 297.4 387 44.7
Cpa.g.sc94.76 Carica papaya HOM05D007385 ORTHO05D009349 8.0e-76 288.5 337 44.8
TAR626G0510 Trochodendron aralioides HOM05D007385 ORTHO05D009349 1.0e-75 288.1 390 43.8
Potri.018G051600 Populus trichocarpa HOM05D007385 ORTHO05D009349 1.4e-75 287.7 329 47.1
Hma1.2p1_0322F.1_g124600 Hydrangea macrophylla HOM05D007385 ORTHO05D009349 3.0e-75 286.6 354 44.6
GSVIVG01008120001 Vitis vinifera HOM05D007385 ORTHO05D009349 4.0e-75 286.2 368 42.9
PGR083G1273 Punica granatum HOM05D007385 ORTHO05D009349 1.3e-73 281.2 339 45.7
Sabra18G0048200 Salix brachista HOM05D007385 ORTHO05D009349 1.3e-73 281.2 329 46.8
AL2G34030 Arabidopsis lyrata HOM05D007385 ORTHO05D009349 1.7e-73 280.8 373 43.4
Manes.14G087500 Manihot esculenta HOM05D007385 ORTHO05D009349 2.2e-73 280.4 330 46.1
Ah.01g002510 Amaranthus hybridus HOM05D007385 ORTHO05D009349 2.8e-73 280.0 396 41.9
BolC6t39859H Brassica oleracea HOM05D007385 ORTHO05D009349 3.7e-73 279.6 324 46.6
A07p40010 Brassica napus HOM05D007385 ORTHO05D009349 4.8e-73 279.3 324 46.0
BraA07t31546Z Brassica rapa HOM05D007385 ORTHO05D009349 4.8e-73 279.3 324 46.0
BcaC08g46845 Brassica carinata HOM05D007385 ORTHO05D009349 6.3e-73 278.9 415 40.5
C06p48270 Brassica napus HOM05D007385 ORTHO05D009349 1.8e-72 277.3 324 46.3
FAN08G0404 Fragaria x ananassa HOM05D007385 ORTHO05D009349 1.8e-72 277.3 334 45.5
BcaC08g46812 Brassica carinata HOM05D007385 ORTHO05D009349 3.1e-72 276.6 324 46.6
Aa31LG4G4430 Aethionema arabicum HOM05D007385 ORTHO05D009349 7.0e-72 275.4 331 46.2
AT1G74120 Arabidopsis thaliana HOM05D007385 ORTHO05D009349 7.0e-72 275.4 327 46.2
Carub.0002s2092 Capsella rubella HOM05D007385 ORTHO05D009349 9.1e-72 275.0 331 46.5
CANSAT78G0918 Cannabis sativa HOM05D007385 ORTHO05D009349 2.7e-71 273.5 327 45.3
CARHR067280 Cardamine hirsuta HOM05D007385 ORTHO05D009349 7.7e-71 271.9 330 45.2
Thhalv10018549m.g Eutrema salsugineum HOM05D007385 ORTHO05D009349 7.7e-71 271.9 329 45.3
Nitab4.5_0001689g0090 Nicotiana tabacum HOM05D007385 ORTHO05D009349 1.3e-70 271.2 238 62.2
Prupe.5G207400 Prunus persica HOM05D007385 ORTHO05D009349 1.3e-70 271.2 341 44.6
Aqoxy3G03653 Aquilegia oxysepala HOM05D007385 ORTHO05D009349 2.9e-70 270.0 404 40.3
Sp5g29350 Schrenkiella parvula HOM05D007385 ORTHO05D009349 2.9e-70 270.0 330 44.5
Gorai.011G295100 Gossypium raimondii HOM05D007385 ORTHO05D009349 3.8e-70 269.6 372 40.3
Actinidia04811 Actinidia chinensis HOM05D007385 ORTHO05D009349 5.0e-70 269.2 306 47.7
COL.COLO4_07677 Corchorus olitorius HOM05D007385 ORTHO05D009349 3.2e-69 266.5 383 40.5
Sc04g0004300 Simmondsia chinensis HOM05D007385 ORTHO05D009349 5.5e-69 265.8 346 44.5
MD14G1214100 Malus domestica HOM05D007385 ORTHO05D009349 3.6e-68 263.1 382 40.3
Thecc.04G178800 Theobroma cacao HOM05D007385 ORTHO05D009349 4.7e-68 262.7 344 42.4
THA.LOC104812111 Tarenaya hassleriana HOM05D007385 ORTHO05D009349 3.0e-67 260.0 369 40.1
Medtr2g061450 Medicago truncatula HOM05D007385 ORTHO05D009349 4.0e-67 259.6 390 39.2
Duzib212G0687 Durio zibethinus HOM05D007385 ORTHO05D009349 3.4e-66 256.5 371 39.6
FvH4_5g13630 Fragaria vesca HOM05D007385 ORTHO05D009349 4.4e-66 256.1 230 53.9
Lalb_Chr11g0068081 Lupinus albus HOM05D007385 ORTHO05D009349 5.7e-66 255.8 371 42.0
Psat1g128320 Pisum sativum HOM05D007385 ORTHO05D009349 7.5e-66 255.4 372 39.5
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 7.5e-66 255.4 377 39.8
arahy.Tifrunner.gnm1.ann1.AV1VK7 Arachis hypogaea HOM05D007385 ORTHO05D009349 4.1e-64 249.6 369 39.8
FAN18G0626 Fragaria x ananassa HOM05D007385 ORTHO05D009349 1.2e-63 248.1 230 53.5
ClCG03G008530 Citrullus lanatus HOM05D007385 ORTHO05D009349 3.5e-63 246.5 331 40.8
Sed0022204 Sechium edule HOM05D007385 ORTHO05D009349 3.5e-63 246.5 340 39.1
MELO3C002869.2 Cucumis melo HOM05D007385 ORTHO05D009349 4.5e-63 246.1 331 39.3
EL10Ac5g11161 Beta vulgaris HOM05D007385 ORTHO05D009349 7.7e-63 245.4 332 41.6
Migut.L01399 Erythranthe guttata HOM05D007385 ORTHO05D009349 7.7e-63 245.4 233 50.2
Lj5E134T0 Lonicera japonica HOM05D007385 ORTHO05D009349 7.7e-63 245.4 273 47.6
AUR62021530 Chenopodium quinoa HOM05D007385 ORTHO05D009349 1.7e-62 244.2 340 41.2
SHI17456 Sapria himalayana HOM05D007385 ORTHO05D009349 5.0e-62 242.7 339 42.5
Lj2g0011212 Lotus japonicus HOM05D007385 ORTHO05D009349 3.3e-61 240.0 389 37.5
Atru.chr9.516 Acer truncatum HOM05D007385 ORTHO05D009349 1.6e-60 237.7 392 38.3
BcaC08g46816 Brassica carinata HOM05D007385 ORTHO05D009349 4.0e-59 233.0 280 45.4
arahy.Tifrunner.gnm1.ann1.9FHV3M Arachis hypogaea HOM05D007385 ORTHO05D009349 7.5e-58 228.8 339 39.8
AUR62039653 Chenopodium quinoa HOM05D007385 ORTHO05D009349 1.1e-56 224.9 273 44.7
Ca_29560_v3 Cicer arietinum L. HOM05D007385 ORTHO05D009349 1.2e-55 221.5 264 46.2
VMungo1309G0993 Vigna mungo HOM05D007385 ORTHO05D009349 2.0e-55 220.7 331 39.0
Phvul.009G202900 Phaseolus vulgaris HOM05D007385 ORTHO05D009349 5.6e-53 212.6 333 35.7
CsaV3_1G037600 Cucumis sativus L. HOM05D007385 ORTHO05D009349 1.4e-51 208.0 232 42.7
Gohir.A10G242100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 3.1e-51 206.8 225 44.4
Gohir.D10G254100 Gossypium hirsutum HOM05D007385 ORTHO05D009349 6.8e-51 205.7 225 44.0
Glyma.04G160400 Glycine max HOM05D007385 ORTHO05D009349 2.0e-47 194.1 335 36.1
Migut.H01126 Erythranthe guttata HOM05D007385 ORTHO05D009349 8.6e-46 188.7 168 54.2
ECA246G0832 Erigeron canadensis HOM05D007385 ORTHO05D009349 1.4e-43 181.4 198 48.0
Migut.H01128 Erythranthe guttata HOM05D007385 ORTHO05D009349 2.6e-42 177.2 159 52.8
Rhsim08G0143700 Rhododendron simsii HOM05D007385 ORTHO05D009349 4.9e-41 172.9 244 41.4
Oeu014423.1 Olea europaea HOM05D007385 ORTHO05D009349 2.1e-39 167.5 371 34.5
HPP92_019471 Vanilla planifolia HOM05D007385 ORTHO05D009349 5.1e-38 162.9 316 34.5
ATR0680G420 Amborella trichopoda HOM05D007385 ORTHO05D009349 1.5e-37 161.4 223 39.5
Migut.H01127 Erythranthe guttata HOM05D007385 ORTHO05D009349 5.8e-34 149.4 197 41.6
COL.COLO4_37709 Corchorus olitorius HOM05D007385 ORTHO05D009349 2.3e-30 137.5 214 35.5
CANSAT78G2199 Cannabis sativa HOM05D007385 ORTHO05D009349 2.8e-28 130.6 253 34.0
Zm00001eb136360 Zea mays HOM05D007385 ORTHO05D009349 5.8e-26 122.9 156 40.4
Os12g0490000 Oryza sativa ssp. japonica HOM05D007385 ORTHO05D009349 1.0e-22 112.1 140 44.3
Actinidia10453 Actinidia chinensis HOM05D007385 ORTHO05D009349 7.8e-15 85.9 75 54.7
Medtr2g060620 Medicago truncatula HOM05D007385 ORTHO05D009349 5.6e-13 79.7 113 39.8
C09p44480 Brassica napus HOM05D003457 ORTHO05D009746 2.6e-10 70.9 241 22.4
Ca_16778_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009746 4.2e-08 63.5 259 22.8
Medtr3g092710 Medicago truncatula HOM05D003457 ORTHO05D009746 9.3e-08 62.4 297 20.9


User provided reference genes

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