Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-105 386.0 184 100.0
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.0e-62 243.8 156 76.9
Nitab4.5_0009972g0050 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.3e-57 226.9 127 85.8
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.3e-53 211.8 145 73.8
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 7.1e-48 194.5 146 65.1
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 5.3e-43 178.3 149 60.4
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 2.6e-42 176.0 142 62.7
Nitab4.5_0009799g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.5e-40 168.3 141 64.5
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 1.5e-37 160.2 128 61.7
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 4.8e-36 155.2 128 60.9
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 4.1e-35 152.1 129 58.9
PGSC0003DMG400044125 Solanum tuberosum HOM05D009034 ORTHO05D009362 5.0e-33 145.2 242 38.4
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 1.9e-32 143.3 129 55.8
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.2e-32 142.1 169 49.1
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 2.7e-31 139.4 143 53.1
Nitab4.5_0004390g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.5e-31 139.0 137 56.2
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 7.9e-31 137.9 143 52.4
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 7.9e-31 137.9 167 47.9
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.0e-30 137.5 146 50.7
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.5e-29 132.9 167 46.7
CAN.G1058.2 Capsicum annuum HOM05D009034 ORTHO05D009362 5.7e-29 131.7 126 52.4
Nitab4.5_0002662g0080 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.3e-28 128.3 112 61.6
PGSC0003DMG400036040 Solanum tuberosum HOM05D009034 ORTHO05D009362 6.9e-27 124.8 149 47.0
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.3e-22 109.8 149 44.3
Nitab4.5_0000283g0270 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.3e-21 105.9 84 66.7
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.7e-21 105.1 112 47.3
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 2.2e-20 103.2 63 81.0
Nitab4.5_0000783g0030 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.4e-19 100.5 167 40.7
Peaxi162Scf01164g00412 Petunia axillaris HOM05D009034 ORTHO05D009362 1.8e-19 100.1 195 32.3
Nitab4.5_0000283g0190 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.4e-19 99.8 63 76.2
Nitab4.5_0003526g0040 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.4e-19 99.8 86 61.6
PGSC0003DMG400024922 Solanum tuberosum HOM05D000257 ORTHO05D004041 3.4e-18 95.9 140 40.0
Sopen03g020740 Solanum pennellii HOM05D000004 ORTHO05D009362 1.4e-14 84.0 82 50.0
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 6.7e-14 81.6 130 36.9
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 2.6e-13 79.7 140 32.1
Nitab4.5_0002096g0090 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.7e-13 78.6 47 76.6
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 5.7e-13 78.6 134 34.3
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 2.8e-12 76.3 154 33.8
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.1e-11 74.3 151 33.1
PGSC0003DMG402024921 Solanum tuberosum HOM05D009034 ORTHO05D009362 3.1e-11 72.8 89 46.1
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 2.6e-10 69.7 136 34.6
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 2.6e-10 69.7 153 31.4
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 3.5e-10 69.3 123 31.7
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 3.5e-10 69.3 163 28.8
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 5.9e-10 68.6 125 34.4
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 1.0e-09 67.8 149 32.9
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 2.2e-09 66.6 149 32.9
Nitab4.5_0001428g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.8e-09 65.9 52 65.4
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.0e-09 65.5 127 31.5
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.5e-09 65.1 129 31.8
FAN02G3878 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.2e-08 62.8 106 34.0
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 3.2e-08 62.8 161 26.7
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 4.2e-08 62.4 182 26.9
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 7.2e-08 61.6 159 28.9
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 9.4e-08 61.2 152 29.6
FAN14G4501 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.7e-07 59.7 174 28.7
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 3.6e-07 59.3 134 30.6
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 3.6e-07 59.3 131 29.0
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 3.6e-07 59.3 139 28.8
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 6.1e-07 58.5 140 28.6
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.1e-07 58.5 159 29.6
Nitab4.5_0012773g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.1e-07 58.5 53 54.7
RcHm_v2.0_Chr5g0019881 Rosa chinensis HOM05D008179 ORTHO05D009362 6.1e-07 58.5 130 30.0
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 1.0e-06 57.8 131 28.2
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 2.3e-06 56.6 156 26.9
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 4.0e-06 55.8 67 40.3
FAN05G1237 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.2e-06 55.5 125 29.6
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 6.7e-06 55.1 148 27.0
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 8.8e-06 54.7 141 27.7
MD05G1336100 Malus domestica HOM05D008179 ORTHO05D009362 8.8e-06 54.7 74 36.5


User provided reference genes

Program Settings