Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 0.0e+00 1112.1 568 100.0
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 3.5e-279 964.5 551 90.6
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 6.1e-207 724.5 689 62.6
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 6.7e-206 721.1 664 63.0
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 5.5e-200 701.4 664 61.0
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 5.5e-200 701.4 664 61.0
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 1.4e-89 334.7 686 36.6
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.0e-88 330.9 382 50.3
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 9.4e-83 312.0 681 35.2
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 8.0e-82 308.9 693 34.3
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 4.1e-78 296.6 726 34.7
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 4.5e-77 293.1 333 52.9
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 3.6e-74 283.5 726 35.1
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 6.1e-74 282.7 393 45.5
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 8.9e-73 278.9 699 32.6
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 3.4e-72 276.9 420 43.8
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 4.4e-72 276.6 407 44.2
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 9.8e-72 275.4 406 42.1
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 2.8e-71 273.9 765 31.6
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.8e-70 271.2 401 43.6
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 2.4e-70 270.8 400 45.2
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 4.1e-70 270.0 398 46.2
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 2.0e-69 267.7 662 34.6
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.0e-68 265.4 245 59.6
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 2.3e-68 264.2 401 40.4
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 3.3e-67 260.4 417 42.0
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 2.8e-66 257.3 730 30.8
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.4e-65 255.0 405 43.2
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 3.1e-65 253.8 579 34.7
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 3.1e-65 253.8 407 41.0
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 6.8e-65 252.7 405 43.0
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 7.5e-64 249.2 426 40.8
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 3.7e-63 246.9 474 38.8
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 3.2e-62 243.8 731 31.2
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 2.7e-61 240.7 397 41.1
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 4.6e-61 240.0 404 40.1
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.1e-57 228.8 399 40.6
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 4.4e-56 223.4 403 37.2
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.4e-54 217.6 419 38.7
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 3.2e-54 217.2 413 38.5
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 2.1e-53 214.5 237 52.3
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.7e-53 214.2 530 33.6
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 6.0e-53 213.0 562 34.3
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 5.6e-51 206.5 468 33.8
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 9.5e-51 205.7 411 38.0
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 9.5e-51 205.7 395 38.0
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 1.2e-50 205.3 401 38.2
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 1.6e-50 204.9 413 39.2
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 3.6e-50 203.8 400 35.5
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 1.1e-49 202.2 416 38.0
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 1.2e-48 198.7 409 37.2
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 1.5e-48 198.4 406 40.9
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 2.0e-48 198.0 471 34.0
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 3.4e-48 197.2 692 29.9
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 4.4e-48 196.8 411 35.3
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 4.4e-48 196.8 234 51.3
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 2.9e-47 194.1 406 38.4
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 4.9e-47 193.4 411 35.5
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 4.9e-47 193.4 423 33.8
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 4.9e-47 193.4 644 31.1
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 7.8e-45 186.0 419 34.4
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 1.7e-44 184.9 405 36.3
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 3.0e-44 184.1 439 33.5
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 1.5e-43 181.8 495 33.1
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 2.5e-43 181.0 401 36.2
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 4.3e-43 180.3 700 28.3
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 5.6e-43 179.9 463 33.9
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.2e-42 178.7 393 37.2
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 1.2e-42 178.7 396 37.1
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 8.1e-42 176.0 393 36.9
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.1e-41 175.6 392 33.4
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.1e-41 174.1 389 37.3
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 5.2e-41 173.3 469 31.3
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 7.6e-40 169.5 414 33.8
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 9.9e-40 169.1 401 34.2
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 1.9e-38 164.9 440 33.2
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 2.4e-38 164.5 490 31.4
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 3.2e-38 164.1 397 33.8
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 1.2e-37 162.2 398 34.7
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 2.7e-37 161.0 399 33.6
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 6.0e-37 159.8 516 30.6
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 3.0e-36 157.5 440 33.0
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 2.8e-34 151.0 478 32.6
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 1.8e-33 148.3 411 32.6
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 4.0e-33 147.1 456 31.8
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 3.4e-32 144.1 398 31.9
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 7.6e-32 142.9 467 29.6
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 2.4e-30 137.9 470 28.9
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 7.1e-30 136.3 400 31.5
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 1.2e-29 135.6 511 28.8
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 2.3e-28 131.3 516 26.6
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 5.1e-28 130.2 217 41.0
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 1.1e-27 129.0 346 33.2
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 2.0e-24 118.2 217 38.7
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 2.6e-24 117.9 103 59.2
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 2.2e-23 114.8 573 24.6
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 6.4e-23 113.2 630 27.5
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 1.9e-22 111.7 459 28.8
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 3.2e-22 110.9 419 27.4
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 5.4e-22 110.2 400 29.5
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 7.1e-22 109.8 396 28.3
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 4.6e-21 107.1 445 29.2
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 4.6e-21 107.1 445 29.2
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 1.8e-20 105.1 578 26.8
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 2.3e-20 104.8 347 30.0
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 3.0e-20 104.4 444 28.8
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 3.0e-20 104.4 272 30.5
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 3.3e-19 100.9 133 46.6
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 4.3e-19 100.5 406 29.1
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 2.1e-18 98.2 370 31.1
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 2.1e-18 98.2 544 27.2
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 8.1e-18 96.3 392 27.3
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.4e-17 95.5 434 28.1
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.4e-17 95.5 434 28.1
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.4e-17 94.7 197 35.5
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 4.0e-17 94.0 421 26.6
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 2.9e-15 87.8 325 30.5
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 8.4e-15 86.3 164 34.8
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.1e-14 85.9 449 28.1
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.1e-14 85.9 449 28.1
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.1e-14 85.9 449 28.1
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 9.3e-14 82.8 325 30.2
Nitab4.5_0007728g0030 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.2e-13 82.4 94 45.7
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 7.9e-13 79.7 376 28.2
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 3.7e-10 70.9 219 29.7
Haze_00347 Corylus avellana HOM05D002899 ORTHO05D003850 4.8e-10 70.5 56 58.9
Os01g0687300 Oryza sativa ssp. japonica HOM05D024721 ORTHO05D025980 1.7e-07 62.0 211 28.4
Zm00001eb295010 Zea mays HOM05D024721 ORTHO05D025980 2.9e-07 61.2 278 23.7
CDE04G2987 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 8.4e-07 59.7 194 28.9
BcaB03g11826 Brassica carinata HOM05D008776 ORTHO05D005587 1.1e-06 59.3 227 29.5
HPP92_021324 Vanilla planifolia HOM05D007001 ORTHO05D005587 1.9e-06 58.5 295 25.8


User provided reference genes

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