Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000307g0130 Nicotiana tabacum HOM05D019980 ORTHO05D022204 9.5e-150 533.9 353 100.0
Nitab4.5_0002527g0010 Nicotiana tabacum HOM05D019980 ORTHO05D022204 1.5e-115 420.2 353 83.3
CAN.G1415.1 Capsicum annuum HOM05D019980 ORTHO05D022204 4.2e-65 252.7 369 62.6
PGSC0003DMG400046434 Solanum tuberosum HOM05D019980 ORTHO05D022204 7.2e-65 251.9 357 59.7
Solyc01g096250.2 Solanum lycopersicum HOM05D019980 ORTHO05D022204 8.0e-56 221.9 360 55.6
Sopen01g040010 Solanum pennellii HOM05D019980 ORTHO05D022204 2.4e-52 210.3 362 55.8
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 4.1e-12 76.6 308 32.8
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 1.7e-10 71.2 199 34.2
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 1.7e-10 71.2 187 35.3
Dinv32623 Davidia involucrata HOM05D004242 ORTHO05D004349 5.1e-10 69.7 115 43.5
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 1.5e-09 68.2 274 31.8
Sabra14G0075500 Salix brachista HOM05D004242 ORTHO05D004349 4.3e-09 66.6 220 30.5
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 7.3e-09 65.9 175 37.7
DCAR_002987 Daucus carota HOM05D004242 ORTHO05D004349 9.6e-09 65.5 131 38.2
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.6e-08 64.7 296 28.7
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 2.1e-08 64.3 198 33.8
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 2.1e-08 64.3 198 33.8
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 2.1e-08 64.3 114 39.5
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 2.8e-08 63.9 187 32.1
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 2.8e-08 63.9 321 34.0
MSTRG.20915 Avicennia marina HOM05D004242 ORTHO05D004349 3.6e-08 63.5 251 32.7
CsaV3_6G008950 Cucumis sativus L. HOM05D004242 ORTHO05D004349 4.7e-08 63.2 142 35.2
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 4.7e-08 63.2 207 31.4
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 6.2e-08 62.8 294 28.9
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 8.1e-08 62.4 164 34.8
CiPaw.02G042800 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.1e-07 62.0 308 25.6
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 1.4e-07 61.6 102 38.2
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 1.4e-07 61.6 104 40.4
Lj1g0015234 Lotus japonicus HOM05D004242 ORTHO05D004349 3.1e-07 60.5 212 28.8
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 4.0e-07 60.1 298 30.2
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 4.0e-07 60.1 172 31.4
Cfa003761 Carpinus fangiana HOM05D004242 ORTHO05D004349 4.0e-07 60.1 145 33.8
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 4.0e-07 60.1 173 33.5
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 5.2e-07 59.7 213 29.1
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 5.2e-07 59.7 131 34.4
Lj9P602T20 Lonicera japonica HOM05D004242 ORTHO05D004349 6.9e-07 59.3 308 32.5
FvH4_7g17260 Fragaria vesca HOM05D004242 ORTHO05D004349 9.0e-07 58.9 229 30.6
FAN06G4791 Fragaria x ananassa HOM05D004242 ORTHO05D004349 9.0e-07 58.9 229 30.6
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 9.0e-07 58.9 198 32.8
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 9.0e-07 58.9 181 35.4
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 2.6e-06 57.4 263 33.1
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 2.6e-06 57.4 263 33.1
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 3.4e-06 57.0 255 33.3
FAN06G2582 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.4e-06 57.0 229 30.6
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 3.4e-06 57.0 310 29.7
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 3.4e-06 57.0 132 32.6
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 3.4e-06 57.0 174 32.2
FAN03G1939 Fragaria x ananassa HOM05D004242 ORTHO05D004349 4.4e-06 56.6 304 26.3
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 5.8e-06 56.2 237 30.8
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 7.6e-06 55.8 177 33.9
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 7.6e-06 55.8 132 32.6
FAN22G2040 Fragaria x ananassa HOM05D004242 ORTHO05D004349 9.9e-06 55.5 237 30.8
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 9.9e-06 55.5 132 31.8


User provided reference genes

Program Settings